RNA–Protein interactions for RNA: ENST00000601849.1

VRK3-224, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-224ENST00000601849 GINS4Q9BRT9 223 aa7.29□□□□□ -1.24
VRK3-224ENST00000601849 DCUN1D5Q9BTE7 237 aa7.29□□□□□ -1.24
VRK3-224ENST00000601849 PARP12Q9H0J9 701 aaKnown RBP7.29□□□□□ -1.24
VRK3-224ENST00000601849 OR2D2Q9H210 308 aa7.29□□□□□ -1.24
VRK3-224ENST00000601849 TECRQ9NZ01 308 aaKnown RBP7.29□□□□□ -1.24
VRK3-224ENST00000601849 DPPA5A6NC42 116 aa7.28□□□□□ -1.24
VRK3-224ENST00000601849 OR11H12B2RN74 326 aa7.28□□□□□ -1.24
VRK3-224ENST00000601849 SLC17A2O00624 439 aa7.28□□□□□ -1.24
VRK3-224ENST00000601849 FABP7O15540 132 aa7.28□□□□□ -1.24
VRK3-224ENST00000601849 DENRO43583 198 aaKnown RBP7.28□□□□□ -1.24
VRK3-224ENST00000601849 PROP1O75360 226 aa7.28□□□□□ -1.24
VRK3-224ENST00000601849 DIRAS3O95661 229 aa7.28□□□□□ -1.24
VRK3-224ENST00000601849 CDK1P06493 297 aa7.28□□□□□ -1.24
VRK3-224ENST00000601849 UCHL1P09936 223 aa7.28□□□□□ -1.24
VRK3-224ENST00000601849 CD37P11049 281 aa7.28□□□□□ -1.24
VRK3-224ENST00000601849 PSMA1P25786 263 aaKnown RBP7.28□□□□□ -1.24
VRK3-224ENST00000601849 UBE2KP61086 200 aa7.28□□□□□ -1.24
VRK3-224ENST00000601849 QRFPP83859 136 aa7.28□□□□□ -1.24
VRK3-224ENST00000601849 PJVKQ0ZLH3 352 aa7.28□□□□□ -1.24
VRK3-224ENST00000601849 INSL4Q14641 139 aa7.28□□□□□ -1.24
VRK3-224ENST00000601849 P2RY14Q15391 338 aa7.28□□□□□ -1.24
VRK3-224ENST00000601849 GUCA2BQ16661 112 aa7.28□□□□□ -1.24
VRK3-224ENST00000601849 ANKRD55Q3KP44 614 aa7.28□□□□□ -1.24
VRK3-224ENST00000601849 OSR1Q8TAX0 266 aaPredicted RBP7.28□□□□□ -1.24
VRK3-224ENST00000601849 RAB3CQ96E17 227 aa7.28□□□□□ -1.24
VRK3-224ENST00000601849 HDHD3Q9BSH5 251 aaPredicted RBP7.28□□□□□ -1.24
VRK3-224ENST00000601849 PECRQ9BY49 303 aa7.28□□□□□ -1.24
VRK3-224ENST00000601849 HIPK2Q9H2X6 1198 aa7.28□□□□□ -1.24
VRK3-224ENST00000601849 PLEKHA3Q9HB20 300 aa7.28□□□□□ -1.24
VRK3-224ENST00000601849 SDHAF2Q9NX18 166 aa7.28□□□□□ -1.24
VRK3-224ENST00000601849 RAB22AQ9UL26 194 aa7.28□□□□□ -1.24
VRK3-224ENST00000601849 A0A0A6YYD4 124 aa7.27□□□□□ -1.25
VRK3-224ENST00000601849 GGCTO75223 188 aaKnown RBP7.27□□□□□ -1.25
VRK3-224ENST00000601849 DHFRP00374 187 aa7.27□□□□□ -1.25
VRK3-224ENST00000601849 IGLV2-23P01705 113 aa7.27□□□□□ -1.25
VRK3-224ENST00000601849 CRYGBP07316 175 aa7.27□□□□□ -1.25
VRK3-224ENST00000601849 GSTT2P0CG29 244 aa7.27□□□□□ -1.25
VRK3-224ENST00000601849 GSTT2BP0CG30 244 aa7.27□□□□□ -1.25
VRK3-224ENST00000601849 APELAP0DMC3 54 aa7.27□□□□□ -1.25
VRK3-224ENST00000601849 TMEM50BP56557 158 aa7.27□□□□□ -1.25
VRK3-224ENST00000601849 LINC00205P59089 165 aa7.27□□□□□ -1.25
VRK3-224ENST00000601849 RHOGP84095 191 aa7.27□□□□□ -1.25
VRK3-224ENST00000601849 DYRK1AQ13627 763 aa7.27□□□□□ -1.25
VRK3-224ENST00000601849 ARL6IP1Q15041 203 aa7.27□□□□□ -1.25
VRK3-224ENST00000601849 SSX1Q16384 188 aa7.27□□□□□ -1.25
VRK3-224ENST00000601849 PRSS8Q16651 343 aa7.27□□□□□ -1.25
VRK3-224ENST00000601849 C2orf76Q3KRA6 126 aa7.27□□□□□ -1.25
VRK3-224ENST00000601849 CD300EQ496F6 205 aaPredicted RBP7.27□□□□□ -1.25
VRK3-224ENST00000601849 MMD2Q8IY49 270 aa7.27□□□□□ -1.25
VRK3-224ENST00000601849 NECAP1Q8NC96 275 aa7.27□□□□□ -1.25
VRK3-224ENST00000601849 ADAD2Q8NCV1 583 aaKnown RBP7.27□□□□□ -1.25
VRK3-224ENST00000601849 SRSF12Q8WXF0 261 aaKnown RBP7.27□□□□□ -1.25
VRK3-224ENST00000601849 TMEM203Q969S6 136 aa7.27□□□□□ -1.25
VRK3-224ENST00000601849 CYYR1Q96J86 154 aa7.27□□□□□ -1.25
VRK3-224ENST00000601849 PRELID3BQ9Y3B1 194 aa7.27□□□□□ -1.25
VRK3-224ENST00000601849 AK6Q9Y3D8 172 aaKnown RBP7.27□□□□□ -1.25
VRK3-224ENST00000601849 V9GY05 133 aa7.27□□□□□ -1.25
VRK3-224ENST00000601849 TRBV6-7A0A0A0MS04 114 aa7.26□□□□□ -1.25
VRK3-224ENST00000601849 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.26□□□□□ -1.25
VRK3-224ENST00000601849 IZUMO1RA6ND01 250 aa7.26□□□□□ -1.25
VRK3-224ENST00000601849 METTL21EPA6NDL7 271 aa7.26□□□□□ -1.25
VRK3-224ENST00000601849 SLC22A5O76082 557 aa7.26□□□□□ -1.25
VRK3-224ENST00000601849 CRYZL1O95825 349 aa7.26□□□□□ -1.25
VRK3-224ENST00000601849 HSMCR30P0CW71 290 aa7.26□□□□□ -1.25
VRK3-224ENST00000601849 KIR2DS2P43631 304 aa7.26□□□□□ -1.25
VRK3-224ENST00000601849 MECP2P51608 486 aaKnown RBP7.26□□□□□ -1.25
VRK3-224ENST00000601849 ARFRP1Q13795 201 aa7.26□□□□□ -1.25
VRK3-224ENST00000601849 EXOSC2Q13868 293 aaKnown RBP7.26□□□□□ -1.25
VRK3-224ENST00000601849 FAM106AQ4KMX7 169 aa7.26□□□□□ -1.25
VRK3-224ENST00000601849 LIPKQ5VXJ0 399 aa7.26□□□□□ -1.25
VRK3-224ENST00000601849 LINC00322Q6ZN03 302 aaPredicted RBP7.26□□□□□ -1.25
VRK3-224ENST00000601849 TTC9CQ8N5M4 171 aa7.26□□□□□ -1.25
VRK3-224ENST00000601849 DEFB125Q8N687 156 aa7.26□□□□□ -1.25
VRK3-224ENST00000601849 VSTM2AQ8TAG5 236 aa7.26□□□□□ -1.25
VRK3-224ENST00000601849 FAM3DQ96BQ1 224 aa7.26□□□□□ -1.25
VRK3-224ENST00000601849 THAP7Q9BT49 309 aaPredicted RBP7.26□□□□□ -1.25
VRK3-224ENST00000601849 KCNK15Q9H427 330 aa7.26□□□□□ -1.25
VRK3-224ENST00000601849 SRD5A3Q9H8P0 318 aa7.26□□□□□ -1.25
VRK3-224ENST00000601849 AKIP1Q9NQ31 210 aa7.26□□□□□ -1.25
VRK3-224ENST00000601849 MRPS7Q9Y2R9 242 aaKnown RBP7.26□□□□□ -1.25
VRK3-224ENST00000601849 TPRKBQ9Y3C4 175 aa7.26□□□□□ -1.25
VRK3-224ENST00000601849 IGKV1-6A0A0C4DH72 117 aa7.25□□□□□ -1.25
VRK3-224ENST00000601849 SRRM4A7MD48 611 aaKnown RBP7.25□□□□□ -1.25
VRK3-224ENST00000601849 ZNF785A8K8V0 405 aa7.25□□□□□ -1.25
VRK3-224ENST00000601849 PDCD5O14737 125 aa7.25□□□□□ -1.25
VRK3-224ENST00000601849 TRBV12-3P01733 135 aa7.25□□□□□ -1.25
VRK3-224ENST00000601849 GNAO1P09471 354 aa7.25□□□□□ -1.25
VRK3-224ENST00000601849 CTXN2P0C2S0 81 aa7.25□□□□□ -1.25
VRK3-224ENST00000601849 FOLR2P14207 255 aa7.25□□□□□ -1.25
VRK3-224ENST00000601849 CD36P16671 472 aa7.25□□□□□ -1.25
VRK3-224ENST00000601849 CALRP27797 417 aaKnown RBP7.25□□□□□ -1.25
VRK3-224ENST00000601849 CDK10Q15131 360 aa7.25□□□□□ -1.25
VRK3-224ENST00000601849 RCN1Q15293 331 aa7.25□□□□□ -1.25
VRK3-224ENST00000601849 DEFB114Q30KQ6 69 aa7.25□□□□□ -1.25
VRK3-224ENST00000601849 C15orf32Q32M92 178 aa7.25□□□□□ -1.25
VRK3-224ENST00000601849 IGSF11Q5DX21 431 aa7.25□□□□□ -1.25
VRK3-224ENST00000601849 OR4A47Q6IF82 309 aa7.25□□□□□ -1.25
VRK3-224ENST00000601849 FBLIM1Q8WUP2 373 aa7.25□□□□□ -1.25
VRK3-224ENST00000601849 FAM110AQ9BQ89 295 aa7.25□□□□□ -1.25
VRK3-224ENST00000601849 AIFM2Q9BRQ8 373 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms