RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 TRIM77I1YAP6 450 aa15.95■□□□□ 0.14
SHKBP1-222ENST00000600320 MPPED1O15442 326 aa15.95■□□□□ 0.14
SHKBP1-222ENST00000600320 RAMP3O60896 148 aa15.95■□□□□ 0.14
SHKBP1-222ENST00000600320 CRYZL1O95825 349 aa15.95■□□□□ 0.14
SHKBP1-222ENST00000600320 RRASP10301 218 aa15.95■□□□□ 0.14
SHKBP1-222ENST00000600320 TAGLNQ01995 201 aaKnown RBP15.95■□□□□ 0.14
SHKBP1-222ENST00000600320 RBMS2Q15434 407 aaKnown RBP15.95■□□□□ 0.14
SHKBP1-222ENST00000600320 RTL8BQ17RB0 113 aa15.95■□□□□ 0.14
SHKBP1-222ENST00000600320 TMEM177Q53S58 311 aa15.95■□□□□ 0.14
SHKBP1-222ENST00000600320 LIAT1Q6ZQX7 453 aa15.95■□□□□ 0.14
SHKBP1-222ENST00000600320 SPAG16Q8N0X2 631 aa15.95■□□□□ 0.14
SHKBP1-222ENST00000600320 FLYWCH2Q96CP2 140 aaKnown RBP15.95■□□□□ 0.14
SHKBP1-222ENST00000600320 SLC25A21Q9BQT8 299 aaPredicted RBP15.95■□□□□ 0.14
SHKBP1-222ENST00000600320 COPZ2Q9P299 210 aa15.95■□□□□ 0.14
SHKBP1-222ENST00000600320 SH2D7A6NKC9 451 aaPredicted RBP15.94■□□□□ 0.14
SHKBP1-222ENST00000600320 SRRM4A7MD48 611 aaKnown RBP15.94■□□□□ 0.14
SHKBP1-222ENST00000600320 AMY1AP04745 511 aa15.94■□□□□ 0.14
SHKBP1-222ENST00000600320 VSIG10L2P0DP72 767 aa15.94■□□□□ 0.14
SHKBP1-222ENST00000600320 F2RP25116 425 aa15.94■□□□□ 0.14
SHKBP1-222ENST00000600320 RPS16P62249 146 aaKnown RBP15.94■□□□□ 0.14
SHKBP1-222ENST00000600320 Q8N9W7 124 aa15.94■□□□□ 0.14
SHKBP1-222ENST00000600320 SCGB3A2Q96PL1 93 aa15.94■□□□□ 0.14
SHKBP1-222ENST00000600320 FLVCR2Q9UPI3 526 aa15.94■□□□□ 0.14
SHKBP1-222ENST00000600320 MOB4Q9Y3A3 225 aa15.94■□□□□ 0.14
SHKBP1-222ENST00000600320 RNF212BA8MTL3 300 aa15.93■□□□□ 0.14
SHKBP1-222ENST00000600320 IGLV2-23P01705 113 aa15.93■□□□□ 0.14
SHKBP1-222ENST00000600320 S100GP29377 79 aa15.93■□□□□ 0.14
SHKBP1-222ENST00000600320 SLC6A1P30531 599 aa15.93■□□□□ 0.14
SHKBP1-222ENST00000600320 KIR2DS2P43631 304 aa15.93■□□□□ 0.14
SHKBP1-222ENST00000600320 MMDQ15546 238 aa15.93■□□□□ 0.14
SHKBP1-222ENST00000600320 ZNF585BQ52M93 769 aa15.93■□□□□ 0.14
SHKBP1-222ENST00000600320 C16orf82Q7Z2V1 217 aa15.93■□□□□ 0.14
SHKBP1-222ENST00000600320 TMED4Q7Z7H5 227 aa15.93■□□□□ 0.14
SHKBP1-222ENST00000600320 CCDC71LQ8N9Z2 235 aa15.93■□□□□ 0.14
SHKBP1-222ENST00000600320 OR4C13Q8NGP0 309 aa15.93■□□□□ 0.14
SHKBP1-222ENST00000600320 OR4S2Q8NH73 311 aa15.93■□□□□ 0.14
SHKBP1-222ENST00000600320 HARBI1Q96MB7 349 aa15.93■□□□□ 0.14
SHKBP1-222ENST00000600320 NCBP2LA6PVI3 153 aaKnown RBP15.92■□□□□ 0.14
SHKBP1-222ENST00000600320 NBR2O15453 112 aa15.92■□□□□ 0.14
SHKBP1-222ENST00000600320 DHRS7BQ6IAN0 325 aaPredicted RBP15.92■□□□□ 0.14
SHKBP1-222ENST00000600320 MZT2BQ6NZ67 158 aa15.92■□□□□ 0.14
SHKBP1-222ENST00000600320 Q6ZS46 218 aa15.92■□□□□ 0.14
SHKBP1-222ENST00000600320 C5orf56Q8N8D9 126 aa15.92■□□□□ 0.14
SHKBP1-222ENST00000600320 NPBQ8NG41 125 aa15.92■□□□□ 0.14
SHKBP1-222ENST00000600320 TP53RKQ96S44 253 aa15.92■□□□□ 0.14
SHKBP1-222ENST00000600320 RNF5Q99942 180 aa15.92■□□□□ 0.14
SHKBP1-222ENST00000600320 NAA60Q9H7X0 242 aa15.92■□□□□ 0.14
SHKBP1-222ENST00000600320 CRYM-AS1A6NIL9 109 aa15.91■□□□□ 0.14
SHKBP1-222ENST00000600320 SHOXO15266 292 aa15.91■□□□□ 0.14
SHKBP1-222ENST00000600320 RBFOX2O43251 390 aaKnown RBP eCLIP15.91■□□□□ 0.14
SHKBP1-222ENST00000600320 S1PR2O95136 353 aa15.91■□□□□ 0.14
SHKBP1-222ENST00000600320 NDUFA3O95167 84 aa15.91■□□□□ 0.14
SHKBP1-222ENST00000600320 LPAR6P43657 344 aa15.91■□□□□ 0.14
SHKBP1-222ENST00000600320 BLCAPP62952 87 aa15.91■□□□□ 0.14
SHKBP1-222ENST00000600320 RELBQ01201 579 aa15.91■□□□□ 0.14
SHKBP1-222ENST00000600320 CBX3Q13185 183 aa15.91■□□□□ 0.14
SHKBP1-222ENST00000600320 PSG5Q15238 335 aa15.91■□□□□ 0.14
SHKBP1-222ENST00000600320 SP6Q3SY56 376 aa15.91■□□□□ 0.14
SHKBP1-222ENST00000600320 POC5Q8NA72 575 aa15.91■□□□□ 0.14
SHKBP1-222ENST00000600320 OR8H1Q8NGG4 311 aa15.91■□□□□ 0.14
SHKBP1-222ENST00000600320 OSR1Q8TAX0 266 aaPredicted RBP15.91■□□□□ 0.14
SHKBP1-222ENST00000600320 FBXL15Q9H469 300 aa15.91■□□□□ 0.14
SHKBP1-222ENST00000600320 RAB18Q9NP72 206 aa15.91■□□□□ 0.14
SHKBP1-222ENST00000600320 LIN7CQ9NUP9 197 aaKnown RBP15.91■□□□□ 0.14
SHKBP1-222ENST00000600320 C1RLQ9NZP8 487 aa15.91■□□□□ 0.14
SHKBP1-222ENST00000600320 JMJD1CQ15652 2540 aa15.91■□□□□ 0.14
SHKBP1-222ENST00000600320 TEX13DA0A0J9YY54 714 aaPredicted RBP15.9■□□□□ 0.14
SHKBP1-222ENST00000600320 C3orf85A0A1B0GTC6 90 aa15.9■□□□□ 0.14
SHKBP1-222ENST00000600320 FAM240BA0A1B0GVZ2 78 aa15.9■□□□□ 0.14
SHKBP1-222ENST00000600320 H0Y980 276 aa15.9■□□□□ 0.14
SHKBP1-222ENST00000600320 RRHO14718 337 aa15.9■□□□□ 0.14
SHKBP1-222ENST00000600320 ARPC1BO15143 372 aaKnown RBP15.9■□□□□ 0.14
SHKBP1-222ENST00000600320 FGF16O43320 207 aa15.9■□□□□ 0.14
SHKBP1-222ENST00000600320 TCRBP04435 133 aa15.9■□□□□ 0.14
SHKBP1-222ENST00000600320 OR5AC1P0C628 307 aa15.9■□□□□ 0.14
SHKBP1-222ENST00000600320 AKR1C4P17516 323 aa15.9■□□□□ 0.14
SHKBP1-222ENST00000600320 C11orf88Q6PI97 169 aa15.9■□□□□ 0.14
SHKBP1-222ENST00000600320 FAM71E2Q8N5Q1 922 aa15.9■□□□□ 0.14
SHKBP1-222ENST00000600320 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.9■□□□□ 0.14
SHKBP1-222ENST00000600320 TSNAXQ99598 290 aaKnown RBP15.9■□□□□ 0.14
SHKBP1-222ENST00000600320 TPSG1Q9NRR2 321 aa15.9■□□□□ 0.14
SHKBP1-222ENST00000600320 SLC25A17O43808 307 aa15.89■□□□□ 0.13
SHKBP1-222ENST00000600320 CRYGBP07316 175 aa15.89■□□□□ 0.13
SHKBP1-222ENST00000600320 LGALS7P47929 136 aa15.89■□□□□ 0.13
SHKBP1-222ENST00000600320 SUPT4H1P63272 117 aaKnown RBP15.89■□□□□ 0.13
SHKBP1-222ENST00000600320 KRTAP24-1Q3LI83 254 aa15.89■□□□□ 0.13
SHKBP1-222ENST00000600320 Q6ZSV7 163 aa15.89■□□□□ 0.13
SHKBP1-222ENST00000600320 VKORC1L1Q8N0U8 176 aa15.89■□□□□ 0.13
SHKBP1-222ENST00000600320 CENPSQ8N2Z9 138 aa15.89■□□□□ 0.13
SHKBP1-222ENST00000600320 TCTEX1D1Q8N7M0 179 aa15.89■□□□□ 0.13
SHKBP1-222ENST00000600320 CD300LFQ8TDQ1 290 aa15.89■□□□□ 0.13
SHKBP1-222ENST00000600320 ZFAND2BQ8WV99 257 aa15.89■□□□□ 0.13
SHKBP1-222ENST00000600320 NPFFR1Q9GZQ6 430 aa15.89■□□□□ 0.13
SHKBP1-222ENST00000600320 C20orf85Q9H1P6 137 aa15.89■□□□□ 0.13
SHKBP1-222ENST00000600320 ZNF702PQ9H963 129 aa15.89■□□□□ 0.13
SHKBP1-222ENST00000600320 PRR13Q9NZ81 148 aa15.89■□□□□ 0.13
SHKBP1-222ENST00000600320 SPDEFO95238 335 aa15.88■□□□□ 0.13
SHKBP1-222ENST00000600320 HPRT1P00492 218 aa15.88■□□□□ 0.13
SHKBP1-222ENST00000600320 IGKV1-39P01597 117 aa15.88■□□□□ 0.13
SHKBP1-222ENST00000600320 IGKV1D-39P04432 117 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms