RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 HSD17B10Q99714 261 aaKnown RBP12.67□□□□□ -0.38
LSM4-206ENST00000600289 PARP11Q9NR21 331 aa12.67□□□□□ -0.38
LSM4-206ENST00000600289 CCDC59Q9P031 241 aaKnown RBP12.67□□□□□ -0.38
LSM4-206ENST00000600289 TRAV41A0A0B4J266 112 aa12.66□□□□□ -0.38
LSM4-206ENST00000600289 A0A1W2PRX2 142 aa12.66□□□□□ -0.38
LSM4-206ENST00000600289 MEIS3P1A6NDR6 274 aa12.66□□□□□ -0.38
LSM4-206ENST00000600289 IGLV1-40P01703 118 aa12.66□□□□□ -0.38
LSM4-206ENST00000600289 PF4V1P10720 104 aa12.66□□□□□ -0.38
LSM4-206ENST00000600289 DYRK1AQ13627 763 aa12.66□□□□□ -0.38
LSM4-206ENST00000600289 CXorf66Q5JRM2 361 aaPredicted RBP12.66□□□□□ -0.38
LSM4-206ENST00000600289 DHRS11Q6UWP2 260 aa12.66□□□□□ -0.38
LSM4-206ENST00000600289 PPP1R27Q86WC6 154 aa12.66□□□□□ -0.38
LSM4-206ENST00000600289 MINDY2Q8NBR6 621 aa12.66□□□□□ -0.38
LSM4-206ENST00000600289 C15orf40Q8WUR7 153 aa12.66□□□□□ -0.38
LSM4-206ENST00000600289 SCOCQ9UIL1 159 aa12.66□□□□□ -0.38
LSM4-206ENST00000600289 FCN1O00602 326 aa12.65□□□□□ -0.38
LSM4-206ENST00000600289 SHOXO15266 292 aa12.65□□□□□ -0.38
LSM4-206ENST00000600289 SLC25A17O43808 307 aa12.65□□□□□ -0.38
LSM4-206ENST00000600289 CA2P00918 260 aa12.65□□□□□ -0.38
LSM4-206ENST00000600289 RCVRNP35243 200 aa12.65□□□□□ -0.38
LSM4-206ENST00000600289 CDX1P47902 265 aaPredicted RBP12.65□□□□□ -0.38
LSM4-206ENST00000600289 UBE2KP61086 200 aa12.65□□□□□ -0.38
LSM4-206ENST00000600289 RPL30P62888 115 aaKnown RBP12.65□□□□□ -0.38
LSM4-206ENST00000600289 KHDC1LQ5JSQ8 128 aa12.65□□□□□ -0.38
LSM4-206ENST00000600289 WFDC9Q8NEX5 89 aa12.65□□□□□ -0.38
LSM4-206ENST00000600289 BORCS5Q969J3 196 aa12.65□□□□□ -0.38
LSM4-206ENST00000600289 EHFQ9NZC4 300 aa12.65□□□□□ -0.38
LSM4-206ENST00000600289 MRPS7Q9Y2R9 242 aaKnown RBP12.65□□□□□ -0.38
LSM4-206ENST00000600289 PRELID3BQ9Y3B1 194 aa12.65□□□□□ -0.38
LSM4-206ENST00000600289 FBXO7Q9Y3I1 522 aa12.65□□□□□ -0.38
LSM4-206ENST00000600289 NUBP2Q9Y5Y2 271 aa12.65□□□□□ -0.38
LSM4-206ENST00000600289 TENM3Q9P273 2699 aa12.65□□□□□ -0.38
LSM4-206ENST00000600289 FAM25AB3EWG3 89 aa12.64□□□□□ -0.39
LSM4-206ENST00000600289 FAM25CB3EWG5 89 aa12.64□□□□□ -0.39
LSM4-206ENST00000600289 FAM25GB3EWG6 89 aa12.64□□□□□ -0.39
LSM4-206ENST00000600289 G3V318 75 aa12.64□□□□□ -0.39
LSM4-206ENST00000600289 H3BMQ9 156 aa12.64□□□□□ -0.39
LSM4-206ENST00000600289 J3QRK9 145 aa12.64□□□□□ -0.39
LSM4-206ENST00000600289 NOL3O60936 208 aaKnown RBP12.64□□□□□ -0.39
LSM4-206ENST00000600289 CRYZL1O95825 349 aa12.64□□□□□ -0.39
LSM4-206ENST00000600289 RPLP1P05386 114 aaKnown RBP12.64□□□□□ -0.39
LSM4-206ENST00000600289 EGR2P11161 476 aaPredicted RBP12.64□□□□□ -0.39
LSM4-206ENST00000600289 SSBP2P81877 361 aaPredicted RBP12.64□□□□□ -0.39
LSM4-206ENST00000600289 AKIRIN2Q53H80 203 aa12.64□□□□□ -0.39
LSM4-206ENST00000600289 SNX29P2Q8IUI4 249 aa12.64□□□□□ -0.39
LSM4-206ENST00000600289 LYSMD2Q8IV50 215 aa12.64□□□□□ -0.39
LSM4-206ENST00000600289 ZNF695Q8IW36 515 aa12.64□□□□□ -0.39
LSM4-206ENST00000600289 TEX45Q8NA69 505 aa12.64□□□□□ -0.39
LSM4-206ENST00000600289 OR5H2Q8NGV7 314 aa12.64□□□□□ -0.39
LSM4-206ENST00000600289 SECTM1Q8WVN6 248 aa12.64□□□□□ -0.39
LSM4-206ENST00000600289 MOB3AQ96BX8 217 aa12.64□□□□□ -0.39
LSM4-206ENST00000600289 ISOC1Q96CN7 298 aa12.64□□□□□ -0.39
LSM4-206ENST00000600289 MIXL1Q9H2W2 232 aa12.64□□□□□ -0.39
LSM4-206ENST00000600289 CCL28Q9NRJ3 127 aa12.64□□□□□ -0.39
LSM4-206ENST00000600289 TPSG1Q9NRR2 321 aa12.64□□□□□ -0.39
LSM4-206ENST00000600289 EXTL2Q9UBQ6 330 aa12.64□□□□□ -0.39
LSM4-206ENST00000600289 DNAH3Q8TD57 4116 aa12.64□□□□□ -0.39
LSM4-206ENST00000600289 SRRM4A7MD48 611 aaKnown RBP12.63□□□□□ -0.39
LSM4-206ENST00000600289 FCER2P06734 321 aa12.63□□□□□ -0.39
LSM4-206ENST00000600289 KIR2DS2P43631 304 aa12.63□□□□□ -0.39
LSM4-206ENST00000600289 TMEM267Q0VDI3 215 aaPredicted RBP12.63□□□□□ -0.39
LSM4-206ENST00000600289 MRGPRG-AS1Q2M3A8 158 aa12.63□□□□□ -0.39
LSM4-206ENST00000600289 VMA21Q3ZAQ7 101 aa12.63□□□□□ -0.39
LSM4-206ENST00000600289 SAMD5Q5TGI4 173 aa12.63□□□□□ -0.39
LSM4-206ENST00000600289 ETV3LQ6ZN32 361 aa12.63□□□□□ -0.39
LSM4-206ENST00000600289 MFSD4AQ8N468 514 aa12.63□□□□□ -0.39
LSM4-206ENST00000600289 KLHL30-AS1Q8NEE0 82 aa12.63□□□□□ -0.39
LSM4-206ENST00000600289 OR4S2Q8NH73 311 aa12.63□□□□□ -0.39
LSM4-206ENST00000600289 ARPC1AQ92747 370 aa12.63□□□□□ -0.39
LSM4-206ENST00000600289 SLC5A7Q9GZV3 580 aa12.63□□□□□ -0.39
LSM4-206ENST00000600289 RABL2AQ9UBK7 228 aaPredicted RBP12.63□□□□□ -0.39
LSM4-206ENST00000600289 RABL2BQ9UNT1 228 aa12.63□□□□□ -0.39
LSM4-206ENST00000600289 WSB1Q9Y6I7 421 aa12.63□□□□□ -0.39
LSM4-206ENST00000600289 ARPC1BO15143 372 aaKnown RBP12.62□□□□□ -0.39
LSM4-206ENST00000600289 RBFOX2O43251 390 aaKnown RBP eCLIP12.62□□□□□ -0.39
LSM4-206ENST00000600289 FCGR3BO75015 233 aa12.62□□□□□ -0.39
LSM4-206ENST00000600289 PMP2P02689 132 aa12.62□□□□□ -0.39
LSM4-206ENST00000600289 PF4P02776 101 aa12.62□□□□□ -0.39
LSM4-206ENST00000600289 RFX2P48378 723 aa12.62□□□□□ -0.39
LSM4-206ENST00000600289 BRWD1-AS2P59051 145 aa12.62□□□□□ -0.39
LSM4-206ENST00000600289 HERV-K104P61576 105 aa12.62□□□□□ -0.39
LSM4-206ENST00000600289 ACTBL2Q562R1 376 aa12.62□□□□□ -0.39
LSM4-206ENST00000600289 KPRPQ5T749 579 aaPredicted RBP12.62□□□□□ -0.39
LSM4-206ENST00000600289 PYHIN1Q6K0P9 492 aa12.62□□□□□ -0.39
LSM4-206ENST00000600289 C8orf86Q6ZUL3 223 aa12.62□□□□□ -0.39
LSM4-206ENST00000600289 OR5M8Q8NGP6 311 aa12.62□□□□□ -0.39
LSM4-206ENST00000600289 TCTEX1D2Q8WW35 142 aa12.62□□□□□ -0.39
LSM4-206ENST00000600289 UBE2E2Q96LR5 201 aa12.62□□□□□ -0.39
LSM4-206ENST00000600289 CLCC1Q96S66 551 aa12.62□□□□□ -0.39
LSM4-206ENST00000600289 TAS2R8Q9NYW2 309 aa12.62□□□□□ -0.39
LSM4-206ENST00000600289 FOXA2Q9Y261 457 aaPredicted RBP12.62□□□□□ -0.39
LSM4-206ENST00000600289 CEPT1Q9Y6K0 416 aa12.62□□□□□ -0.39
LSM4-206ENST00000600289 SOX15O60248 233 aa12.61□□□□□ -0.39
LSM4-206ENST00000600289 CREBL2O60519 120 aaPredicted RBP12.61□□□□□ -0.39
LSM4-206ENST00000600289 HRH1P35367 487 aa12.61□□□□□ -0.39
LSM4-206ENST00000600289 MYCNOSP40205 109 aa12.61□□□□□ -0.39
LSM4-206ENST00000600289 FXYD4P59646 89 aa12.61□□□□□ -0.39
LSM4-206ENST00000600289 MRPS10P82664 201 aaKnown RBP12.61□□□□□ -0.39
LSM4-206ENST00000600289 RUNX1Q01196 453 aa12.61□□□□□ -0.39
LSM4-206ENST00000600289 CATR1Q13166 79 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms