RNA–Protein interactions for RNA: ENST00000599589.5

ARHGEF1-218, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-218ENST00000599589 ZNF883P0CG24 379 aa16.22■□□□□ 0.19
ARHGEF1-218ENST00000599589 ZNF816Q0VGE8 651 aaPredicted RBP16.22■□□□□ 0.19
ARHGEF1-218ENST00000599589 SPINK9Q5DT21 86 aa16.22■□□□□ 0.19
ARHGEF1-218ENST00000599589 FREM1Q5H8C1 2179 aa16.22■□□□□ 0.19
ARHGEF1-218ENST00000599589 ODAMA1E959 279 aa16.22■□□□□ 0.19
ARHGEF1-218ENST00000599589 F2Z2F3 143 aa16.22■□□□□ 0.19
ARHGEF1-218ENST00000599589 RHBDL1O75783 438 aa16.22■□□□□ 0.19
ARHGEF1-218ENST00000599589 TRAPPC6AO75865 159 aa16.22■□□□□ 0.19
ARHGEF1-218ENST00000599589 THBS3P49746 956 aa16.22■□□□□ 0.19
ARHGEF1-218ENST00000599589 TMPRSS7Q7RTY8 843 aa16.22■□□□□ 0.19
ARHGEF1-218ENST00000599589 OR5AU1Q8NGC0 362 aa16.22■□□□□ 0.19
ARHGEF1-218ENST00000599589 TMEM204Q9BSN7 226 aa16.22■□□□□ 0.19
ARHGEF1-218ENST00000599589 PRRG4Q9BZD6 226 aa16.22■□□□□ 0.19
ARHGEF1-218ENST00000599589 SH2D2AQ9NP31 389 aa16.22■□□□□ 0.19
ARHGEF1-218ENST00000599589 KCNIP2Q9NS61 270 aa16.22■□□□□ 0.19
ARHGEF1-218ENST00000599589 TRAPPC2LQ9UL33 140 aa16.22■□□□□ 0.19
ARHGEF1-218ENST00000599589 LRRC30A6NM36 301 aa16.21■□□□□ 0.19
ARHGEF1-218ENST00000599589 DTD1Q8TEA8 209 aa16.21■□□□□ 0.19
ARHGEF1-218ENST00000599589 MRPL18Q9H0U6 180 aaKnown RBP16.21■□□□□ 0.19
ARHGEF1-218ENST00000599589 ZDBF2Q9HCK1 2354 aa16.21■□□□□ 0.19
ARHGEF1-218ENST00000599589 C17orf112F2Z3M2 114 aa16.21■□□□□ 0.19
ARHGEF1-218ENST00000599589 SIRPB1O00241 398 aa16.21■□□□□ 0.19
ARHGEF1-218ENST00000599589 COMPP49747 757 aaPredicted RBP16.21■□□□□ 0.19
ARHGEF1-218ENST00000599589 RAB7AP51149 207 aa16.21■□□□□ 0.19
ARHGEF1-218ENST00000599589 COL5A1-AS1Q5SY13 56 aa16.21■□□□□ 0.19
ARHGEF1-218ENST00000599589 C11orf42Q8N5U0 333 aa16.21■□□□□ 0.19
ARHGEF1-218ENST00000599589 ESDP10768 282 aa16.2■□□□□ 0.18
ARHGEF1-218ENST00000599589 ARF1P84077 181 aaKnown RBP16.2■□□□□ 0.18
ARHGEF1-218ENST00000599589 SAMD10Q9BYL1 202 aa16.2■□□□□ 0.18
ARHGEF1-218ENST00000599589 MSL2Q9HCI7 577 aa16.2■□□□□ 0.18
ARHGEF1-218ENST00000599589 PPIAL4AQ9Y536 164 aa16.2■□□□□ 0.18
ARHGEF1-218ENST00000599589 ZNF90Q03938 601 aa16.2■□□□□ 0.18
ARHGEF1-218ENST00000599589 BAGE3Q86Y29 109 aa16.2■□□□□ 0.18
ARHGEF1-218ENST00000599589 BAGE2Q86Y30 109 aa16.2■□□□□ 0.18
ARHGEF1-218ENST00000599589 ARRDC1-AS1Q9H2J1 176 aa16.2■□□□□ 0.18
ARHGEF1-218ENST00000599589 DNAJC4Q9NNZ3 241 aa16.2■□□□□ 0.18
ARHGEF1-218ENST00000599589 LOXL2Q9Y4K0 774 aa16.2■□□□□ 0.18
ARHGEF1-218ENST00000599589 RNF114Q9Y508 228 aa16.2■□□□□ 0.18
ARHGEF1-218ENST00000599589 SERPINA7P05543 415 aa16.19■□□□□ 0.18
ARHGEF1-218ENST00000599589 TIMP3P35625 211 aa16.19■□□□□ 0.18
ARHGEF1-218ENST00000599589 OR10G8Q8NGN5 311 aa16.19■□□□□ 0.18
ARHGEF1-218ENST00000599589 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.19■□□□□ 0.18
ARHGEF1-218ENST00000599589 ZFP30Q9Y2G7 519 aa16.19■□□□□ 0.18
ARHGEF1-218ENST00000599589 VPS13AQ96RL7 3174 aa16.19■□□□□ 0.18
ARHGEF1-218ENST00000599589 YLPM1P49750 1951 aaKnown RBP16.19■□□□□ 0.18
ARHGEF1-218ENST00000599589 ZNF503-AS2A6NEH8 195 aa16.19■□□□□ 0.18
ARHGEF1-218ENST00000599589 RNF212BA8MTL3 300 aa16.19■□□□□ 0.18
ARHGEF1-218ENST00000599589 RFPL3SP0C7P2 107 aa16.19■□□□□ 0.18
ARHGEF1-218ENST00000599589 VWC2Q2TAL6 325 aa16.19■□□□□ 0.18
ARHGEF1-218ENST00000599589 Q6P435 159 aa16.19■□□□□ 0.18
ARHGEF1-218ENST00000599589 Q8N7P7 452 aa16.19■□□□□ 0.18
ARHGEF1-218ENST00000599589 OCC1Q8TAD7 63 aa16.19■□□□□ 0.18
ARHGEF1-218ENST00000599589 KCNE4Q8WWG9 221 aa16.19■□□□□ 0.18
ARHGEF1-218ENST00000599589 APOBEC3DQ96AK3 386 aaPredicted RBP16.19■□□□□ 0.18
ARHGEF1-218ENST00000599589 FAM103A1Q9BTL3 118 aaKnown RBP16.19■□□□□ 0.18
ARHGEF1-218ENST00000599589 S1PR2O95136 353 aa16.18■□□□□ 0.18
ARHGEF1-218ENST00000599589 CHRNB4P30926 498 aa16.18■□□□□ 0.18
ARHGEF1-218ENST00000599589 SRD5A2P31213 254 aa16.18■□□□□ 0.18
ARHGEF1-218ENST00000599589 EDDM3BP56851 147 aa16.18■□□□□ 0.18
ARHGEF1-218ENST00000599589 WIPI1Q5MNZ9 446 aaPredicted RBP16.18■□□□□ 0.18
ARHGEF1-218ENST00000599589 M0R296 226 aa16.18■□□□□ 0.18
ARHGEF1-218ENST00000599589 SLC17A3O00476 420 aa16.18■□□□□ 0.18
ARHGEF1-218ENST00000599589 P0C879 139 aa16.18■□□□□ 0.18
ARHGEF1-218ENST00000599589 RPL30P62888 115 aaKnown RBP16.18■□□□□ 0.18
ARHGEF1-218ENST00000599589 MMDQ15546 238 aa16.18■□□□□ 0.18
ARHGEF1-218ENST00000599589 ZNF808Q8N4W9 903 aaPredicted RBP16.18■□□□□ 0.18
ARHGEF1-218ENST00000599589 FBXL7Q9UJT9 491 aa16.18■□□□□ 0.18
ARHGEF1-218ENST00000599589 SCO2A0A1W2PP80 73 aa16.17■□□□□ 0.18
ARHGEF1-218ENST00000599589 A0A1W2PPV4 95 aa16.17■□□□□ 0.18
ARHGEF1-218ENST00000599589 FRMD6-AS1P0C7T7 363 aa16.17■□□□□ 0.18
ARHGEF1-218ENST00000599589 FOXG1P55316 489 aaPredicted RBP16.17■□□□□ 0.18
ARHGEF1-218ENST00000599589 C6orf15Q6UXA7 325 aaPredicted RBP16.17■□□□□ 0.18
ARHGEF1-218ENST00000599589 ZNF497Q6ZNH5 498 aa16.17■□□□□ 0.18
ARHGEF1-218ENST00000599589 MOB1BQ7L9L4 216 aa16.17■□□□□ 0.18
ARHGEF1-218ENST00000599589 PPP1R32Q7Z5V6 425 aa16.17■□□□□ 0.18
ARHGEF1-218ENST00000599589 ZPBPQ9BS86 351 aa16.17■□□□□ 0.18
ARHGEF1-218ENST00000599589 GTF3C1Q12789 2109 aa16.17■□□□□ 0.18
ARHGEF1-218ENST00000599589 USF3Q68DE3 2245 aa16.17■□□□□ 0.18
ARHGEF1-218ENST00000599589 RBMXL2O75526 392 aaKnown RBP16.17■□□□□ 0.18
ARHGEF1-218ENST00000599589 SP9P0CG40 484 aa16.17■□□□□ 0.18
ARHGEF1-218ENST00000599589 OTX2P32243 289 aa16.17■□□□□ 0.18
ARHGEF1-218ENST00000599589 KRTDAPP60985 99 aa16.17■□□□□ 0.18
ARHGEF1-218ENST00000599589 HLA-DRB5Q30154 266 aa16.17■□□□□ 0.18
ARHGEF1-218ENST00000599589 MCEMP1Q8IX19 187 aa16.17■□□□□ 0.18
ARHGEF1-218ENST00000599589 OR1L6Q8NGR2 347 aa16.17■□□□□ 0.18
ARHGEF1-218ENST00000599589 CIB3Q96Q77 187 aaPredicted RBP16.17■□□□□ 0.18
ARHGEF1-218ENST00000599589 WIPI2Q9Y4P8 454 aa16.17■□□□□ 0.18
ARHGEF1-218ENST00000599589 GNG3P63215 75 aa16.16■□□□□ 0.18
ARHGEF1-218ENST00000599589 TRIP6Q15654 476 aaKnown RBP16.16■□□□□ 0.18
ARHGEF1-218ENST00000599589 FBXW9Q5XUX1 488 aa16.16■□□□□ 0.18
ARHGEF1-218ENST00000599589 FAM53AQ6NSI3 398 aaPredicted RBP16.16■□□□□ 0.18
ARHGEF1-218ENST00000599589 C5orf30Q96GV9 206 aa16.16■□□□□ 0.18
ARHGEF1-218ENST00000599589 SLC35E1Q96K37 410 aa16.16■□□□□ 0.18
ARHGEF1-218ENST00000599589 OR2D2Q9H210 308 aa16.16■□□□□ 0.18
ARHGEF1-218ENST00000599589 FOXJ2Q9P0K8 574 aa16.16■□□□□ 0.18
ARHGEF1-218ENST00000599589 ANKRD30BLA7E2S9 258 aa16.16■□□□□ 0.18
ARHGEF1-218ENST00000599589 FCN1O00602 326 aa16.16■□□□□ 0.18
ARHGEF1-218ENST00000599589 OR2H2O95918 312 aa16.16■□□□□ 0.18
ARHGEF1-218ENST00000599589 IER3P46695 156 aa16.16■□□□□ 0.18
ARHGEF1-218ENST00000599589 KRTCAP3Q53RY4 240 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms