RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 CT45A5P0DMU8 189 aa14.55□□□□□ -0.08
PNKP-213ENST00000599543 CT45A7P0DMV0 189 aa14.55□□□□□ -0.08
PNKP-213ENST00000599543 NFYAP23511 347 aaPredicted RBP14.55□□□□□ -0.08
PNKP-213ENST00000599543 INSL3P51460 131 aa14.55□□□□□ -0.08
PNKP-213ENST00000599543 GNB1P62873 340 aa14.55□□□□□ -0.08
PNKP-213ENST00000599543 KIAA0141Q14154 515 aaPredicted RBP14.55□□□□□ -0.08
PNKP-213ENST00000599543 Q6ZS49 121 aa14.55□□□□□ -0.08
PNKP-213ENST00000599543 LAX1Q8IWV1 398 aa14.55□□□□□ -0.08
PNKP-213ENST00000599543 MINDY2Q8NBR6 621 aa14.55□□□□□ -0.08
PNKP-213ENST00000599543 BEST4Q8NFU0 473 aa14.55□□□□□ -0.08
PNKP-213ENST00000599543 ABHD5Q8WTS1 349 aa14.55□□□□□ -0.08
PNKP-213ENST00000599543 EDARADDQ8WWZ3 215 aa14.55□□□□□ -0.08
PNKP-213ENST00000599543 AP3S1Q92572 193 aa14.55□□□□□ -0.08
PNKP-213ENST00000599543 AGMATQ9BSE5 352 aa14.55□□□□□ -0.08
PNKP-213ENST00000599543 RBM38Q9H0Z9 239 aaKnown RBP14.55□□□□□ -0.08
PNKP-213ENST00000599543 GHITMQ9H3K2 345 aa14.55□□□□□ -0.08
PNKP-213ENST00000599543 FBXL15Q9H469 300 aa14.55□□□□□ -0.08
PNKP-213ENST00000599543 ZNF256Q9Y2P7 627 aaPredicted RBP14.55□□□□□ -0.08
PNKP-213ENST00000599543 LSM4Q9Y4Z0 139 aaKnown RBP14.55□□□□□ -0.08
PNKP-213ENST00000599543 A0A1W2PN81 502 aa14.54□□□□□ -0.08
PNKP-213ENST00000599543 H0YJW9 148 aa14.54□□□□□ -0.08
PNKP-213ENST00000599543 RRHO14718 337 aa14.54□□□□□ -0.08
PNKP-213ENST00000599543 MC5RP33032 325 aa14.54□□□□□ -0.08
PNKP-213ENST00000599543 CHRNA7P36544 502 aa14.54□□□□□ -0.08
PNKP-213ENST00000599543 NDPQ00604 133 aa14.54□□□□□ -0.08
PNKP-213ENST00000599543 SRSF7Q16629 238 aaKnown RBP eCLIP14.54□□□□□ -0.08
PNKP-213ENST00000599543 ASPHD1Q5U4P2 390 aa14.54□□□□□ -0.08
PNKP-213ENST00000599543 HOGA1Q86XE5 327 aa14.54□□□□□ -0.08
PNKP-213ENST00000599543 TCTEX1D1Q8N7M0 179 aa14.54□□□□□ -0.08
PNKP-213ENST00000599543 SNAPC3Q92966 411 aa14.54□□□□□ -0.08
PNKP-213ENST00000599543 C5orf30Q96GV9 206 aa14.54□□□□□ -0.08
PNKP-213ENST00000599543 BCL7BQ9BQE9 202 aa14.54□□□□□ -0.08
PNKP-213ENST00000599543 DCUN1D5Q9BTE7 237 aa14.54□□□□□ -0.08
PNKP-213ENST00000599543 OR2D2Q9H210 308 aa14.54□□□□□ -0.08
PNKP-213ENST00000599543 IFT46Q9NQC8 304 aa14.54□□□□□ -0.08
PNKP-213ENST00000599543 EXTL2Q9UBQ6 330 aa14.54□□□□□ -0.08
PNKP-213ENST00000599543 ANXA10Q9UJ72 324 aa14.54□□□□□ -0.08
PNKP-213ENST00000599543 WASHC3Q9Y3C0 194 aa14.54□□□□□ -0.08
PNKP-213ENST00000599543 RBM7Q9Y580 266 aaKnown RBP14.54□□□□□ -0.08
PNKP-213ENST00000599543 A3GALT2U3KPV4 340 aa14.54□□□□□ -0.08
PNKP-213ENST00000599543 SMIM31A0A1B0GVY4 71 aa14.53□□□□□ -0.08
PNKP-213ENST00000599543 ITGB1BP1O14713 200 aa14.53□□□□□ -0.08
PNKP-213ENST00000599543 PROP1O75360 226 aa14.53□□□□□ -0.08
PNKP-213ENST00000599543 RBBP9O75884 186 aa14.53□□□□□ -0.08
PNKP-213ENST00000599543 LY86O95711 162 aa14.53□□□□□ -0.08
PNKP-213ENST00000599543 ARPC4P59998 168 aa14.53□□□□□ -0.08
PNKP-213ENST00000599543 CX3CL1P78423 397 aa14.53□□□□□ -0.08
PNKP-213ENST00000599543 ZNF660Q6AZW8 331 aaPredicted RBP14.53□□□□□ -0.08
PNKP-213ENST00000599543 H1FOOQ8IZA3 346 aaPredicted RBP14.53□□□□□ -0.08
PNKP-213ENST00000599543 CCDC59Q9P031 241 aaKnown RBP14.53□□□□□ -0.08
PNKP-213ENST00000599543 ZNF221Q9UK13 617 aa14.53□□□□□ -0.08
PNKP-213ENST00000599543 FOXA2Q9Y261 457 aaPredicted RBP14.53□□□□□ -0.08
PNKP-213ENST00000599543 FBXO7Q9Y3I1 522 aa14.53□□□□□ -0.08
PNKP-213ENST00000599543 M0R1X1 148 aa14.52□□□□□ -0.09
PNKP-213ENST00000599543 PRSS3P35030 304 aa14.52□□□□□ -0.09
PNKP-213ENST00000599543 CRIP2P52943 208 aaPredicted RBP14.52□□□□□ -0.09
PNKP-213ENST00000599543 TMEM267Q0VDI3 215 aaPredicted RBP14.52□□□□□ -0.09
PNKP-213ENST00000599543 CNIH2Q6PI25 160 aa14.52□□□□□ -0.09
PNKP-213ENST00000599543 OR5AN1Q8NGI8 311 aa14.52□□□□□ -0.09
PNKP-213ENST00000599543 ALX4Q9H161 411 aaPredicted RBP14.52□□□□□ -0.09
PNKP-213ENST00000599543 U3KQK5 164 aa14.52□□□□□ -0.09
PNKP-213ENST00000599543 IGKV1D-13A0A0B4J2D9 117 aa14.51□□□□□ -0.09
PNKP-213ENST00000599543 OVOL1O14753 267 aa14.51□□□□□ -0.09
PNKP-213ENST00000599543 IGKV1-13P0DP09 117 aa14.51□□□□□ -0.09
PNKP-213ENST00000599543 C19orf54Q5BKX5 351 aa14.51□□□□□ -0.09
PNKP-213ENST00000599543 PYHIN1Q6K0P9 492 aa14.51□□□□□ -0.09
PNKP-213ENST00000599543 ZNF429Q86V71 674 aa14.51□□□□□ -0.09
PNKP-213ENST00000599543 CASTOR1Q8WTX7 329 aa14.51□□□□□ -0.09
PNKP-213ENST00000599543 DCUN1D4Q92564 292 aa14.51□□□□□ -0.09
PNKP-213ENST00000599543 CMTM3Q96MX0 182 aa14.51□□□□□ -0.09
PNKP-213ENST00000599543 RNF5Q99942 180 aa14.51□□□□□ -0.09
PNKP-213ENST00000599543 C6orf62Q9GZU0 229 aaPredicted RBP14.51□□□□□ -0.09
PNKP-213ENST00000599543 METTL1Q9UBP6 276 aaKnown RBP14.51□□□□□ -0.09
PNKP-213ENST00000599543 RSL24D1Q9UHA3 163 aaKnown RBP14.51□□□□□ -0.09
PNKP-213ENST00000599543 LINC01619G3V211 115 aa14.5□□□□□ -0.09
PNKP-213ENST00000599543 SOX15O60248 233 aa14.5□□□□□ -0.09
PNKP-213ENST00000599543 SAP30O75446 220 aa14.5□□□□□ -0.09
PNKP-213ENST00000599543 PMP2P02689 132 aa14.5□□□□□ -0.09
PNKP-213ENST00000599543 ACTBL2Q562R1 376 aa14.5□□□□□ -0.09
PNKP-213ENST00000599543 SLIRPQ9GZT3 109 aaKnown RBP14.5□□□□□ -0.09
PNKP-213ENST00000599543 TOLLIPQ9H0E2 274 aa14.5□□□□□ -0.09
PNKP-213ENST00000599543 SDHAF2Q9NX18 166 aa14.5□□□□□ -0.09
PNKP-213ENST00000599543 FCN1O00602 326 aa14.49□□□□□ -0.09
PNKP-213ENST00000599543 LGALS1P09382 135 aaKnown RBP14.49□□□□□ -0.09
PNKP-213ENST00000599543 AADACP22760 399 aa14.49□□□□□ -0.09
PNKP-213ENST00000599543 CD40LGP29965 261 aa14.49□□□□□ -0.09
PNKP-213ENST00000599543 CBX5P45973 191 aa14.49□□□□□ -0.09
PNKP-213ENST00000599543 UNQ5815/PRO19632Q6UWF5 114 aa14.49□□□□□ -0.09
PNKP-213ENST00000599543 PPP1R27Q86WC6 154 aa14.49□□□□□ -0.09
PNKP-213ENST00000599543 ZNF383Q8NA42 475 aa14.49□□□□□ -0.09
PNKP-213ENST00000599543 MCFD2Q8NI22 146 aa14.49□□□□□ -0.09
PNKP-213ENST00000599543 GPX8Q8TED1 209 aa14.49□□□□□ -0.09
PNKP-213ENST00000599543 CLCC1Q96S66 551 aa14.49□□□□□ -0.09
PNKP-213ENST00000599543 FAM103A1Q9BTL3 118 aaKnown RBP14.49□□□□□ -0.09
PNKP-213ENST00000599543 NUBP2Q9Y5Y2 271 aa14.49□□□□□ -0.09
PNKP-213ENST00000599543 SMAD5-AS1Q9Y6J3 95 aa14.49□□□□□ -0.09
PNKP-213ENST00000599543 CA2P00918 260 aa14.48□□□□□ -0.09
PNKP-213ENST00000599543 APOA2P02652 100 aa14.48□□□□□ -0.09
PNKP-213ENST00000599543 IGKV1-16P04430 117 aa14.48□□□□□ -0.09
PNKP-213ENST00000599543 CTXN2P0C2S0 81 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms