RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 CNIH2Q6PI25 160 aa9.39□□□□□ -0.91
LIG1-217ENST00000599165 UNQ5815/PRO19632Q6UWF5 114 aa9.39□□□□□ -0.91
LIG1-217ENST00000599165 ZNF645Q8N7E2 425 aa9.39□□□□□ -0.91
LIG1-217ENST00000599165 TCTEX1D1Q8N7M0 179 aa9.39□□□□□ -0.91
LIG1-217ENST00000599165 OR1N2Q8NGR9 330 aa9.39□□□□□ -0.91
LIG1-217ENST00000599165 SNAPC3Q92966 411 aa9.39□□□□□ -0.91
LIG1-217ENST00000599165 HARBI1Q96MB7 349 aa9.39□□□□□ -0.91
LIG1-217ENST00000599165 MCRIP2Q9BUT9 160 aaKnown RBP9.39□□□□□ -0.91
LIG1-217ENST00000599165 AUNIPQ9H7T9 357 aa9.39□□□□□ -0.91
LIG1-217ENST00000599165 SPATA2Q9UM82 520 aa9.39□□□□□ -0.91
LIG1-217ENST00000599165 HUWE1Q7Z6Z7 4374 aaKnown RBP9.38□□□□□ -0.91
LIG1-217ENST00000599165 A0A087WXM4 84 aa9.38□□□□□ -0.91
LIG1-217ENST00000599165 AIREO43918 545 aa9.38□□□□□ -0.91
LIG1-217ENST00000599165 RBMXL2O75526 392 aaKnown RBP9.38□□□□□ -0.91
LIG1-217ENST00000599165 TNFAIP8O95379 198 aa9.38□□□□□ -0.91
LIG1-217ENST00000599165 SMIM18P0DKX4 95 aa9.38□□□□□ -0.91
LIG1-217ENST00000599165 LGALS7P47929 136 aa9.38□□□□□ -0.91
LIG1-217ENST00000599165 LSM3P62310 102 aaKnown RBP9.38□□□□□ -0.91
LIG1-217ENST00000599165 ACTBL2Q562R1 376 aa9.38□□□□□ -0.91
LIG1-217ENST00000599165 TMEM65Q6PI78 240 aa9.38□□□□□ -0.91
LIG1-217ENST00000599165 HOGA1Q86XE5 327 aa9.38□□□□□ -0.91
LIG1-217ENST00000599165 OR5M8Q8NGP6 311 aa9.38□□□□□ -0.91
LIG1-217ENST00000599165 GRPEL2Q8TAA5 225 aa9.38□□□□□ -0.91
LIG1-217ENST00000599165 RHOVQ96L33 236 aa9.38□□□□□ -0.91
LIG1-217ENST00000599165 GPHA2Q96T91 129 aa9.38□□□□□ -0.91
LIG1-217ENST00000599165 RBMX2Q9Y388 322 aaKnown RBP9.38□□□□□ -0.91
LIG1-217ENST00000599165 IGHV4OR15-8A0A075B7B6 117 aa9.37□□□□□ -0.91
LIG1-217ENST00000599165 A0A087WW49 117 aa9.37□□□□□ -0.91
LIG1-217ENST00000599165 A0A0A6YYH2 397 aa9.37□□□□□ -0.91
LIG1-217ENST00000599165 A6NJ64 397 aa9.37□□□□□ -0.91
LIG1-217ENST00000599165 CRYZL1O95825 349 aa9.37□□□□□ -0.91
LIG1-217ENST00000599165 IGHV3-11P01762 117 aa9.37□□□□□ -0.91
LIG1-217ENST00000599165 FCER2P06734 321 aa9.37□□□□□ -0.91
LIG1-217ENST00000599165 LGALS1P09382 135 aaKnown RBP9.37□□□□□ -0.91
LIG1-217ENST00000599165 CTXN2P0C2S0 81 aa9.37□□□□□ -0.91
LIG1-217ENST00000599165 SLURP1P55000 103 aa9.37□□□□□ -0.91
LIG1-217ENST00000599165 UBE2KP61086 200 aa9.37□□□□□ -0.91
LIG1-217ENST00000599165 NCS1P62166 190 aa9.37□□□□□ -0.91
LIG1-217ENST00000599165 DEFA5Q01523 94 aa9.37□□□□□ -0.91
LIG1-217ENST00000599165 ZNF616Q08AN1 781 aa9.37□□□□□ -0.91
LIG1-217ENST00000599165 IDO2Q6ZQW0 420 aa9.37□□□□□ -0.91
LIG1-217ENST00000599165 OVCH2Q7RTZ1 564 aa9.37□□□□□ -0.91
LIG1-217ENST00000599165 BEST4Q8NFU0 473 aa9.37□□□□□ -0.91
LIG1-217ENST00000599165 ABHD5Q8WTS1 349 aa9.37□□□□□ -0.91
LIG1-217ENST00000599165 DCUN1D4Q92564 292 aa9.37□□□□□ -0.91
LIG1-217ENST00000599165 ADTRPQ96IZ2 230 aa9.37□□□□□ -0.91
LIG1-217ENST00000599165 MS4A10Q96PG2 267 aa9.37□□□□□ -0.91
LIG1-217ENST00000599165 GPR61Q9BZJ8 451 aa9.37□□□□□ -0.91
LIG1-217ENST00000599165 ANAPC10Q9UM13 185 aa9.37□□□□□ -0.91
LIG1-217ENST00000599165 RBM7Q9Y580 266 aaKnown RBP9.37□□□□□ -0.91
LIG1-217ENST00000599165 SEC14L6B5MCN3 397 aa9.36□□□□□ -0.91
LIG1-217ENST00000599165 SHOXO15266 292 aa9.36□□□□□ -0.91
LIG1-217ENST00000599165 TMEM127O75204 238 aa9.36□□□□□ -0.91
LIG1-217ENST00000599165 SAA1P0DJI8 122 aaPredicted RBP9.36□□□□□ -0.91
LIG1-217ENST00000599165 AADACP22760 399 aa9.36□□□□□ -0.91
LIG1-217ENST00000599165 TAGLNQ01995 201 aaKnown RBP9.36□□□□□ -0.91
LIG1-217ENST00000599165 TMEM267Q0VDI3 215 aaPredicted RBP9.36□□□□□ -0.91
LIG1-217ENST00000599165 PRSS8Q16651 343 aa9.36□□□□□ -0.91
LIG1-217ENST00000599165 RTL8BQ17RB0 113 aa9.36□□□□□ -0.91
LIG1-217ENST00000599165 TIMM50Q3ZCQ8 353 aa9.36□□□□□ -0.91
LIG1-217ENST00000599165 OR2B11Q5JQS5 317 aa9.36□□□□□ -0.91
LIG1-217ENST00000599165 C10orf55Q5SWW7 151 aa9.36□□□□□ -0.91
LIG1-217ENST00000599165 OR5T1Q8NG75 326 aa9.36□□□□□ -0.91
LIG1-217ENST00000599165 DLX4Q92988 240 aaPredicted RBP9.36□□□□□ -0.91
LIG1-217ENST00000599165 FUNDC2Q9BWH2 189 aa9.36□□□□□ -0.91
LIG1-217ENST00000599165 A0A1B0GW64 132 aa9.35□□□□□ -0.91
LIG1-217ENST00000599165 MEIS3P1A6NDR6 274 aa9.35□□□□□ -0.91
LIG1-217ENST00000599165 XRCC3O43542 346 aa9.35□□□□□ -0.91
LIG1-217ENST00000599165 FCGR3BO75015 233 aa9.35□□□□□ -0.91
LIG1-217ENST00000599165 BRI3O95415 125 aa9.35□□□□□ -0.91
LIG1-217ENST00000599165 OR8U8P0C7N1 319 aa9.35□□□□□ -0.91
LIG1-217ENST00000599165 RRASP10301 218 aa9.35□□□□□ -0.91
LIG1-217ENST00000599165 TPPP2P59282 170 aa9.35□□□□□ -0.91
LIG1-217ENST00000599165 DGCR2P98153 550 aa9.35□□□□□ -0.91
LIG1-217ENST00000599165 C9orf66Q5T8R8 295 aa9.35□□□□□ -0.91
LIG1-217ENST00000599165 PYHIN1Q6K0P9 492 aa9.35□□□□□ -0.91
LIG1-217ENST00000599165 KCTD9Q7L273 389 aa9.35□□□□□ -0.91
LIG1-217ENST00000599165 VKORC1L1Q8N0U8 176 aa9.35□□□□□ -0.91
LIG1-217ENST00000599165 TEX45Q8NA69 505 aa9.35□□□□□ -0.91
LIG1-217ENST00000599165 POC5Q8NA72 575 aa9.35□□□□□ -0.91
LIG1-217ENST00000599165 OR13F1Q8NGS4 319 aa9.35□□□□□ -0.91
LIG1-217ENST00000599165 OSR1Q8TAX0 266 aaPredicted RBP9.35□□□□□ -0.91
LIG1-217ENST00000599165 SLC25A46Q96AG3 418 aa9.35□□□□□ -0.91
LIG1-217ENST00000599165 NAA50Q9GZZ1 169 aaKnown RBP9.35□□□□□ -0.91
LIG1-217ENST00000599165 ZNF430Q9H8G1 570 aaPredicted RBP9.35□□□□□ -0.91
LIG1-217ENST00000599165 CCL28Q9NRJ3 127 aa9.35□□□□□ -0.91
LIG1-217ENST00000599165 LSM4Q9Y4Z0 139 aaKnown RBP9.35□□□□□ -0.91
LIG1-217ENST00000599165 LINC01619G3V211 115 aa9.34□□□□□ -0.91
LIG1-217ENST00000599165 TRGV3P03979 118 aa9.34□□□□□ -0.91
LIG1-217ENST00000599165 EIF4EP06730 217 aaKnown RBP9.34□□□□□ -0.91
LIG1-217ENST00000599165 APELAP0DMC3 54 aa9.34□□□□□ -0.91
LIG1-217ENST00000599165 FCGR2CP31995 323 aa9.34□□□□□ -0.91
LIG1-217ENST00000599165 TAS2R20P59543 309 aa9.34□□□□□ -0.91
LIG1-217ENST00000599165 VBP1P61758 197 aa9.34□□□□□ -0.91
LIG1-217ENST00000599165 DYRK1AQ13627 763 aa9.34□□□□□ -0.91
LIG1-217ENST00000599165 UBE2NLQ5JXB2 153 aa9.34□□□□□ -0.91
LIG1-217ENST00000599165 C11orf87Q6NUJ2 197 aa9.34□□□□□ -0.91
LIG1-217ENST00000599165 SAMD12Q8N8I0 201 aa9.34□□□□□ -0.91
LIG1-217ENST00000599165 ADAD2Q8NCV1 583 aaKnown RBP9.34□□□□□ -0.91
LIG1-217ENST00000599165 SRSF12Q8WXF0 261 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms