RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 ETV3LQ6ZN32 361 aa11□□□□□ -0.65
SHKBP1-218ENST00000598907 CENPVQ7Z7K6 275 aaPredicted RBP11□□□□□ -0.65
SHKBP1-218ENST00000598907 MCRIP2Q9BUT9 160 aaKnown RBP11□□□□□ -0.65
SHKBP1-218ENST00000598907 MCUBQ9NWR8 336 aa11□□□□□ -0.65
SHKBP1-218ENST00000598907 GAB2Q9UQC2 676 aa11□□□□□ -0.65
SHKBP1-218ENST00000598907 RAB7AP51149 207 aa10.99□□□□□ -0.65
SHKBP1-218ENST00000598907 LUMP51884 338 aaPredicted RBP10.99□□□□□ -0.65
SHKBP1-218ENST00000598907 PRRX1P54821 245 aa10.99□□□□□ -0.65
SHKBP1-218ENST00000598907 HLA-DRB5Q30154 266 aa10.99□□□□□ -0.65
SHKBP1-218ENST00000598907 ODF3L1Q8IXM7 274 aa10.99□□□□□ -0.65
SHKBP1-218ENST00000598907 OR2AK2Q8NG84 335 aa10.99□□□□□ -0.65
SHKBP1-218ENST00000598907 OR4X2Q8NGF9 303 aa10.99□□□□□ -0.65
SHKBP1-218ENST00000598907 OR4P4Q8NGL7 312 aa10.99□□□□□ -0.65
SHKBP1-218ENST00000598907 ABHD14AQ9BUJ0 271 aa10.99□□□□□ -0.65
SHKBP1-218ENST00000598907 FXYD6Q9H0Q3 95 aa10.99□□□□□ -0.65
SHKBP1-218ENST00000598907 IFI27L2Q9H2X8 130 aa10.99□□□□□ -0.65
SHKBP1-218ENST00000598907 GHITMQ9H3K2 345 aa10.99□□□□□ -0.65
SHKBP1-218ENST00000598907 ZMAT5Q9UDW3 170 aaKnown RBP10.99□□□□□ -0.65
SHKBP1-218ENST00000598907 SCP2D1Q9UJQ7 156 aa10.99□□□□□ -0.65
SHKBP1-218ENST00000598907 A0A1W2PPE3 182 aa10.98□□□□□ -0.65
SHKBP1-218ENST00000598907 A6NDX4 124 aa10.98□□□□□ -0.65
SHKBP1-218ENST00000598907 LY6LH3BQJ8 138 aa10.98□□□□□ -0.65
SHKBP1-218ENST00000598907 ST8SIA5O15466 376 aa10.98□□□□□ -0.65
SHKBP1-218ENST00000598907 PROP1O75360 226 aa10.98□□□□□ -0.65
SHKBP1-218ENST00000598907 IGLV2-14P01704 120 aa10.98□□□□□ -0.65
SHKBP1-218ENST00000598907 OR8U9P0C7N5 309 aa10.98□□□□□ -0.65
SHKBP1-218ENST00000598907 GNG10P50151 68 aa10.98□□□□□ -0.65
SHKBP1-218ENST00000598907 CCR6P51684 374 aa10.98□□□□□ -0.65
SHKBP1-218ENST00000598907 ZNF137PP52743 207 aa10.98□□□□□ -0.65
SHKBP1-218ENST00000598907 DEFA1P59665 94 aa10.98□□□□□ -0.65
SHKBP1-218ENST00000598907 DEFA3P59666 94 aa10.98□□□□□ -0.65
SHKBP1-218ENST00000598907 SURF2Q15527 256 aaPredicted RBP10.98□□□□□ -0.65
SHKBP1-218ENST00000598907 MSMO1Q15800 293 aa10.98□□□□□ -0.65
SHKBP1-218ENST00000598907 SCGB2B2Q4G0G5 96 aa10.98□□□□□ -0.65
SHKBP1-218ENST00000598907 MZT2BQ6NZ67 158 aa10.98□□□□□ -0.65
SHKBP1-218ENST00000598907 IDO2Q6ZQW0 420 aa10.98□□□□□ -0.65
SHKBP1-218ENST00000598907 LHFPL4Q7Z7J7 247 aa10.98□□□□□ -0.65
SHKBP1-218ENST00000598907 DYNAPQ8N1N2 210 aa10.98□□□□□ -0.65
SHKBP1-218ENST00000598907 POC5Q8NA72 575 aa10.98□□□□□ -0.65
SHKBP1-218ENST00000598907 OR8U1Q8NH10 309 aa10.98□□□□□ -0.65
SHKBP1-218ENST00000598907 ST6GALNAC6Q969X2 333 aa10.98□□□□□ -0.65
SHKBP1-218ENST00000598907 SLC25A21Q9BQT8 299 aaPredicted RBP10.98□□□□□ -0.65
SHKBP1-218ENST00000598907 ZNF251Q9BRH9 671 aa10.98□□□□□ -0.65
SHKBP1-218ENST00000598907 PLECQ15149 4684 aaKnown RBP10.97□□□□□ -0.65
SHKBP1-218ENST00000598907 BUB1B-PAK6H3BSN5 160 aa10.97□□□□□ -0.65
SHKBP1-218ENST00000598907 TOR1AO14656 332 aa10.97□□□□□ -0.65
SHKBP1-218ENST00000598907 RAMP3O60896 148 aa10.97□□□□□ -0.65
SHKBP1-218ENST00000598907 SLC22A5O76082 557 aa10.97□□□□□ -0.65
SHKBP1-218ENST00000598907 JTBO76095 146 aa10.97□□□□□ -0.65
SHKBP1-218ENST00000598907 NDUFB6O95139 128 aa10.97□□□□□ -0.65
SHKBP1-218ENST00000598907 GNRHRP30968 328 aa10.97□□□□□ -0.65
SHKBP1-218ENST00000598907 ECI1P42126 302 aa10.97□□□□□ -0.65
SHKBP1-218ENST00000598907 LGALS4P56470 323 aa10.97□□□□□ -0.65
SHKBP1-218ENST00000598907 FXYD4P59646 89 aa10.97□□□□□ -0.65
SHKBP1-218ENST00000598907 HERV-K104P61576 105 aa10.97□□□□□ -0.65
SHKBP1-218ENST00000598907 EIF4EBP1Q13541 118 aaPredicted RBP10.97□□□□□ -0.65
SHKBP1-218ENST00000598907 LDLRAD2Q5SZI1 272 aa10.97□□□□□ -0.65
SHKBP1-218ENST00000598907 SBSPONQ8IVN8 264 aa10.97□□□□□ -0.65
SHKBP1-218ENST00000598907 DUSP18Q8NEJ0 188 aa10.97□□□□□ -0.65
SHKBP1-218ENST00000598907 ABHD14BQ96IU4 210 aa10.97□□□□□ -0.65
SHKBP1-218ENST00000598907 RSRP1Q9BUV0 290 aa10.97□□□□□ -0.65
SHKBP1-218ENST00000598907 CCL28Q9NRJ3 127 aa10.97□□□□□ -0.65
SHKBP1-218ENST00000598907 RNF150Q9ULK6 438 aa10.97□□□□□ -0.65
SHKBP1-218ENST00000598907 GPR132Q9UNW8 380 aa10.97□□□□□ -0.65
SHKBP1-218ENST00000598907 ALMS1Q8TCU4 4167 aa10.97□□□□□ -0.65
SHKBP1-218ENST00000598907 RAB29O14966 203 aa10.96□□□□□ -0.65
SHKBP1-218ENST00000598907 ARG1P05089 322 aa10.96□□□□□ -0.65
SHKBP1-218ENST00000598907 RAB25P57735 213 aa10.96□□□□□ -0.65
SHKBP1-218ENST00000598907 RBMS2Q15434 407 aaKnown RBP10.96□□□□□ -0.65
SHKBP1-218ENST00000598907 MINOS1Q5TGZ0 78 aa10.96□□□□□ -0.65
SHKBP1-218ENST00000598907 FAM71F2Q6NXP2 309 aa10.96□□□□□ -0.65
SHKBP1-218ENST00000598907 LPCAT3Q6P1A2 487 aa10.96□□□□□ -0.65
SHKBP1-218ENST00000598907 NRARPQ7Z6K4 114 aa10.96□□□□□ -0.65
SHKBP1-218ENST00000598907 ZNF645Q8N7E2 425 aa10.96□□□□□ -0.65
SHKBP1-218ENST00000598907 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.96□□□□□ -0.65
SHKBP1-218ENST00000598907 ZBTB34Q8NCN2 500 aa10.96□□□□□ -0.65
SHKBP1-218ENST00000598907 MARCH1Q8TCQ1 289 aa10.96□□□□□ -0.65
SHKBP1-218ENST00000598907 SECTM1Q8WVN6 248 aa10.96□□□□□ -0.65
SHKBP1-218ENST00000598907 C5orf30Q96GV9 206 aa10.96□□□□□ -0.65
SHKBP1-218ENST00000598907 AKR1E2Q96JD6 320 aa10.96□□□□□ -0.65
SHKBP1-218ENST00000598907 SLC5A7Q9GZV3 580 aa10.96□□□□□ -0.65
SHKBP1-218ENST00000598907 OR2D2Q9H210 308 aa10.96□□□□□ -0.65
SHKBP1-218ENST00000598907 PIPOXQ9P0Z9 390 aa10.96□□□□□ -0.65
SHKBP1-218ENST00000598907 PITPNC1Q9UKF7 332 aa10.96□□□□□ -0.65
SHKBP1-218ENST00000598907 TBL2Q9Y4P3 447 aaKnown RBP10.96□□□□□ -0.65
SHKBP1-218ENST00000598907 MINOS1-NBL1R4GNA1 71 aa10.96□□□□□ -0.65
SHKBP1-218ENST00000598907 SAA2-SAA4A0A096LPE2 208 aa10.95□□□□□ -0.66
SHKBP1-218ENST00000598907 FAM240BA0A1B0GVZ2 78 aa10.95□□□□□ -0.66
SHKBP1-218ENST00000598907 PTTG1O95997 202 aa10.95□□□□□ -0.66
SHKBP1-218ENST00000598907 TCRBP04435 133 aa10.95□□□□□ -0.66
SHKBP1-218ENST00000598907 CTSDP07339 412 aaPredicted RBP10.95□□□□□ -0.66
SHKBP1-218ENST00000598907 SAA2P0DJI9 122 aaPredicted RBP10.95□□□□□ -0.66
SHKBP1-218ENST00000598907 HTR1DP28221 377 aa10.95□□□□□ -0.66
SHKBP1-218ENST00000598907 THBS3P49746 956 aa10.95□□□□□ -0.66
SHKBP1-218ENST00000598907 ZNF818PQ6ZRF7 136 aa10.95□□□□□ -0.66
SHKBP1-218ENST00000598907 ZNF833PQ6ZTB9 187 aa10.95□□□□□ -0.66
SHKBP1-218ENST00000598907 SLC38A6Q8IZM9 456 aa10.95□□□□□ -0.66
SHKBP1-218ENST00000598907 DRAM1Q8N682 238 aa10.95□□□□□ -0.66
SHKBP1-218ENST00000598907 BVESQ8NE79 360 aa10.95□□□□□ -0.66
SHKBP1-218ENST00000598907 OR10X1Q8NGY0 326 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms