RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 OR2B11Q5JQS5 317 aa15.55■□□□□ 0.08
SHKBP1-214ENST00000597396 LIN54Q6MZP7 749 aa15.55■□□□□ 0.08
SHKBP1-214ENST00000597396 MFSD4AQ8N468 514 aa15.55■□□□□ 0.08
SHKBP1-214ENST00000597396 C11orf44Q8N8P7 122 aa15.55■□□□□ 0.08
SHKBP1-214ENST00000597396 SOSTQ9BQB4 213 aa15.55■□□□□ 0.08
SHKBP1-214ENST00000597396 HSPB9Q9BQS6 159 aa15.55■□□□□ 0.08
SHKBP1-214ENST00000597396 TINAGL1Q9GZM7 467 aaPredicted RBP15.55■□□□□ 0.08
SHKBP1-214ENST00000597396 AP4M1O00189 453 aa15.54■□□□□ 0.08
SHKBP1-214ENST00000597396 GSTZ1O43708 216 aaPredicted RBP15.54■□□□□ 0.08
SHKBP1-214ENST00000597396 FBXO24O75426 580 aa15.54■□□□□ 0.08
SHKBP1-214ENST00000597396 RAB3DO95716 219 aa15.54■□□□□ 0.08
SHKBP1-214ENST00000597396 CSF1P09603 554 aa15.54■□□□□ 0.08
SHKBP1-214ENST00000597396 LGALS7P47929 136 aa15.54■□□□□ 0.08
SHKBP1-214ENST00000597396 CATR1Q13166 79 aa15.54■□□□□ 0.08
SHKBP1-214ENST00000597396 PSG5Q15238 335 aa15.54■□□□□ 0.08
SHKBP1-214ENST00000597396 PYDC2Q56P42 97 aa15.54■□□□□ 0.08
SHKBP1-214ENST00000597396 ZNF818PQ6ZRF7 136 aa15.54■□□□□ 0.08
SHKBP1-214ENST00000597396 CHPT1Q8WUD6 406 aa15.54■□□□□ 0.08
SHKBP1-214ENST00000597396 NOL4LQ96MY1 436 aaPredicted RBP15.54■□□□□ 0.08
SHKBP1-214ENST00000597396 GPHA2Q96T91 129 aa15.54■□□□□ 0.08
SHKBP1-214ENST00000597396 LINC00527Q9UJ94 153 aa15.54■□□□□ 0.08
SHKBP1-214ENST00000597396 PSMB11A5LHX3 300 aa15.53■□□□□ 0.08
SHKBP1-214ENST00000597396 LINC01548A6NM66 108 aa15.53■□□□□ 0.08
SHKBP1-214ENST00000597396 SLC25A17O43808 307 aa15.53■□□□□ 0.08
SHKBP1-214ENST00000597396 KIR2DS2P43631 304 aa15.53■□□□□ 0.08
SHKBP1-214ENST00000597396 EIF4EBP1Q13541 118 aaPredicted RBP15.53■□□□□ 0.08
SHKBP1-214ENST00000597396 SPANXN2Q5MJ10 180 aa15.53■□□□□ 0.08
SHKBP1-214ENST00000597396 STEAP1BQ6NZ63 245 aa15.53■□□□□ 0.08
SHKBP1-214ENST00000597396 ARRDC1Q8N5I2 433 aa15.53■□□□□ 0.08
SHKBP1-214ENST00000597396 OR5AU1Q8NGC0 362 aa15.53■□□□□ 0.08
SHKBP1-214ENST00000597396 OR4S2Q8NH73 311 aa15.53■□□□□ 0.08
SHKBP1-214ENST00000597396 CD74P04233 296 aa15.52■□□□□ 0.08
SHKBP1-214ENST00000597396 GNRHRP30968 328 aa15.52■□□□□ 0.08
SHKBP1-214ENST00000597396 VMA21Q3ZAQ7 101 aa15.52■□□□□ 0.08
SHKBP1-214ENST00000597396 AADACL3Q5VUY0 350 aa15.52■□□□□ 0.08
SHKBP1-214ENST00000597396 LPCAT3Q6P1A2 487 aa15.52■□□□□ 0.08
SHKBP1-214ENST00000597396 CCDC190Q86UF4 302 aa15.52■□□□□ 0.08
SHKBP1-214ENST00000597396 CMTM1Q8IZ96 169 aa15.52■□□□□ 0.08
SHKBP1-214ENST00000597396 STPG2Q8N412 459 aa15.52■□□□□ 0.08
SHKBP1-214ENST00000597396 OR6Q1Q8NGQ2 317 aa15.52■□□□□ 0.08
SHKBP1-214ENST00000597396 SGMS2Q8NHU3 365 aa15.52■□□□□ 0.08
SHKBP1-214ENST00000597396 OSR1Q8TAX0 266 aaPredicted RBP15.52■□□□□ 0.08
SHKBP1-214ENST00000597396 WIPF2Q8TF74 440 aaPredicted RBP15.52■□□□□ 0.08
SHKBP1-214ENST00000597396 CLCC1Q96S66 551 aa15.52■□□□□ 0.08
SHKBP1-214ENST00000597396 PARP11Q9NR21 331 aa15.52■□□□□ 0.08
SHKBP1-214ENST00000597396 V9GYH0 126 aa15.52■□□□□ 0.08
SHKBP1-214ENST00000597396 IGHV7-81A0A0B4J1V7 117 aa15.51■□□□□ 0.07
SHKBP1-214ENST00000597396 GPR31O00270 319 aa15.51■□□□□ 0.07
SHKBP1-214ENST00000597396 IGLV2-23P01705 113 aa15.51■□□□□ 0.07
SHKBP1-214ENST00000597396 AKAIN1P0CW23 69 aa15.51■□□□□ 0.07
SHKBP1-214ENST00000597396 CD28P10747 220 aa15.51■□□□□ 0.07
SHKBP1-214ENST00000597396 S100GP29377 79 aa15.51■□□□□ 0.07
SHKBP1-214ENST00000597396 SLC35B1P78383 322 aa15.51■□□□□ 0.07
SHKBP1-214ENST00000597396 MEF2DQ14814 521 aa15.51■□□□□ 0.07
SHKBP1-214ENST00000597396 OR4X2Q8NGF9 303 aa15.51■□□□□ 0.07
SHKBP1-214ENST00000597396 OR4D10Q8NGI6 311 aa15.51■□□□□ 0.07
SHKBP1-214ENST00000597396 OR51H1Q8NH63 302 aa15.51■□□□□ 0.07
SHKBP1-214ENST00000597396 ABHD5Q8WTS1 349 aa15.51■□□□□ 0.07
SHKBP1-214ENST00000597396 OR51J1Q9H342 316 aa15.51■□□□□ 0.07
SHKBP1-214ENST00000597396 PGAM2P15259 253 aa15.5■□□□□ 0.07
SHKBP1-214ENST00000597396 PTBP1P26599 531 aaKnown RBP eCLIP15.5■□□□□ 0.07
SHKBP1-214ENST00000597396 SCGB2B2Q4G0G5 96 aa15.5■□□□□ 0.07
SHKBP1-214ENST00000597396 HIST2H2BDQ6DRA6 164 aa15.5■□□□□ 0.07
SHKBP1-214ENST00000597396 ZNF329Q86UD4 541 aa15.5■□□□□ 0.07
SHKBP1-214ENST00000597396 SPAG16Q8N0X2 631 aa15.5■□□□□ 0.07
SHKBP1-214ENST00000597396 POC5Q8NA72 575 aa15.5■□□□□ 0.07
SHKBP1-214ENST00000597396 THAP7Q9BT49 309 aaPredicted RBP15.5■□□□□ 0.07
SHKBP1-214ENST00000597396 GON7Q9BXV9 100 aa15.5■□□□□ 0.07
SHKBP1-214ENST00000597396 TPSG1Q9NRR2 321 aa15.5■□□□□ 0.07
SHKBP1-214ENST00000597396 TNCP24821 2201 aa15.49■□□□□ 0.07
SHKBP1-214ENST00000597396 A6NHS1 94 aa15.49■□□□□ 0.07
SHKBP1-214ENST00000597396 SRRM4A7MD48 611 aaKnown RBP15.49■□□□□ 0.07
SHKBP1-214ENST00000597396 DISC1C4P0D8 188 aa15.49■□□□□ 0.07
SHKBP1-214ENST00000597396 M0QZ24 198 aa15.49■□□□□ 0.07
SHKBP1-214ENST00000597396 FCN1O00602 326 aa15.49■□□□□ 0.07
SHKBP1-214ENST00000597396 ATP6V0E1O15342 81 aa15.49■□□□□ 0.07
SHKBP1-214ENST00000597396 CA2P00918 260 aa15.49■□□□□ 0.07
SHKBP1-214ENST00000597396 RLN1P04808 185 aa15.49■□□□□ 0.07
SHKBP1-214ENST00000597396 VDAC1P21796 283 aa15.49■□□□□ 0.07
SHKBP1-214ENST00000597396 PPP5CP53041 499 aa15.49■□□□□ 0.07
SHKBP1-214ENST00000597396 UCP3P55916 312 aa15.49■□□□□ 0.07
SHKBP1-214ENST00000597396 ZNF79Q15937 498 aa15.49■□□□□ 0.07
SHKBP1-214ENST00000597396 PHLDA2Q53GA4 152 aa15.49■□□□□ 0.07
SHKBP1-214ENST00000597396 C10orf99Q6UWK7 81 aa15.49■□□□□ 0.07
SHKBP1-214ENST00000597396 PPP1R27Q86WC6 154 aa15.49■□□□□ 0.07
SHKBP1-214ENST00000597396 SLC38A6Q8IZM9 456 aa15.49■□□□□ 0.07
SHKBP1-214ENST00000597396 Q8N402 240 aa15.49■□□□□ 0.07
SHKBP1-214ENST00000597396 OR4C16Q8NGL9 310 aa15.49■□□□□ 0.07
SHKBP1-214ENST00000597396 ANKRD20A5PA0PJZ0 165 aa15.48■□□□□ 0.07
SHKBP1-214ENST00000597396 PGLYRP1O75594 196 aaPredicted RBP15.48■□□□□ 0.07
SHKBP1-214ENST00000597396 ETV6P41212 452 aa15.48■□□□□ 0.07
SHKBP1-214ENST00000597396 UBE2KP61086 200 aa15.48■□□□□ 0.07
SHKBP1-214ENST00000597396 CX3CL1P78423 397 aa15.48■□□□□ 0.07
SHKBP1-214ENST00000597396 FAAP20Q6NZ36 180 aa15.48■□□□□ 0.07
SHKBP1-214ENST00000597396 LHFPL1Q86WI0 220 aa15.48■□□□□ 0.07
SHKBP1-214ENST00000597396 TEX45Q8NA69 505 aa15.48■□□□□ 0.07
SHKBP1-214ENST00000597396 CITED2Q99967 270 aaPredicted RBP15.48■□□□□ 0.07
SHKBP1-214ENST00000597396 RSRP1Q9BUV0 290 aa15.48■□□□□ 0.07
SHKBP1-214ENST00000597396 RBFOX2O43251 390 aaKnown RBP eCLIP15.47■□□□□ 0.07
SHKBP1-214ENST00000597396 HRASP01112 189 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms