RNA–Protein interactions for RNA: ENST00000597304.5

ZNF558-205, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 2,612 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-205ENST00000597304 WIPI2Q9Y4P8 454 aa10.56□□□□□ -0.72
ZNF558-205ENST00000597304 FREM1Q5H8C1 2179 aa10.56□□□□□ -0.72
ZNF558-205ENST00000597304 IGKV3D-15A0A087WSY6 115 aa10.55□□□□□ -0.72
ZNF558-205ENST00000597304 RAB29O14966 203 aa10.55□□□□□ -0.72
ZNF558-205ENST00000597304 HNF1AP20823 631 aa10.55□□□□□ -0.72
ZNF558-205ENST00000597304 ARR3P36575 388 aa10.55□□□□□ -0.72
ZNF558-205ENST00000597304 EDDM3BP56851 147 aa10.55□□□□□ -0.72
ZNF558-205ENST00000597304 ZNF90Q03938 601 aa10.55□□□□□ -0.72
ZNF558-205ENST00000597304 IGFBP7Q16270 282 aa10.55□□□□□ -0.72
ZNF558-205ENST00000597304 H2BFWTQ7Z2G1 175 aa10.55□□□□□ -0.72
ZNF558-205ENST00000597304 Q8N7P7 452 aa10.55□□□□□ -0.72
ZNF558-205ENST00000597304 MRPL18Q9H0U6 180 aaKnown RBP10.55□□□□□ -0.72
ZNF558-205ENST00000597304 CFAP54Q96N23 3096 aa10.55□□□□□ -0.72
ZNF558-205ENST00000597304 TRAV9-1A0A075B6T8 112 aa10.55□□□□□ -0.72
ZNF558-205ENST00000597304 CLDN14O95500 239 aa10.55□□□□□ -0.72
ZNF558-205ENST00000597304 CD1BP29016 333 aa10.55□□□□□ -0.72
ZNF558-205ENST00000597304 GFRA1P56159 465 aa10.55□□□□□ -0.72
ZNF558-205ENST00000597304 Q8IYB0 196 aa10.55□□□□□ -0.72
ZNF558-205ENST00000597304 SAMD10Q9BYL1 202 aa10.55□□□□□ -0.72
ZNF558-205ENST00000597304 KCNIP1Q9NZI2 227 aa10.55□□□□□ -0.72
ZNF558-205ENST00000597304 WDR83OSQ9Y284 106 aa10.55□□□□□ -0.72
ZNF558-205ENST00000597304 IL6RP08887 468 aaPredicted RBP10.54□□□□□ -0.72
ZNF558-205ENST00000597304 SELEP16581 610 aa10.54□□□□□ -0.72
ZNF558-205ENST00000597304 FOLR3P41439 243 aa10.54□□□□□ -0.72
ZNF558-205ENST00000597304 SRYQ05066 204 aa10.54□□□□□ -0.72
ZNF558-205ENST00000597304 BAGE3Q86Y29 109 aa10.54□□□□□ -0.72
ZNF558-205ENST00000597304 BAGE2Q86Y30 109 aa10.54□□□□□ -0.72
ZNF558-205ENST00000597304 TUSC5Q8IXB3 177 aa10.54□□□□□ -0.72
ZNF558-205ENST00000597304 C5orf30Q96GV9 206 aa10.54□□□□□ -0.72
ZNF558-205ENST00000597304 GMPPAQ96IJ6 420 aaPredicted RBP10.54□□□□□ -0.72
ZNF558-205ENST00000597304 DEPPQ9NTK1 212 aa10.54□□□□□ -0.72
ZNF558-205ENST00000597304 SCO2A0A1W2PP80 73 aa10.54□□□□□ -0.72
ZNF558-205ENST00000597304 C17orf98A8MV24 154 aa10.54□□□□□ -0.72
ZNF558-205ENST00000597304 ARL14EPLP0DKL9 152 aa10.54□□□□□ -0.72
ZNF558-205ENST00000597304 MRPS11P82912 194 aaKnown RBP10.54□□□□□ -0.72
ZNF558-205ENST00000597304 OR5I1Q13606 314 aa10.54□□□□□ -0.72
ZNF558-205ENST00000597304 GALMQ96C23 342 aa10.54□□□□□ -0.72
ZNF558-205ENST00000597304 RTL8AQ9BWD3 113 aa10.54□□□□□ -0.72
ZNF558-205ENST00000597304 QTRT1Q9BXR0 403 aaKnown RBP10.54□□□□□ -0.72
ZNF558-205ENST00000597304 IL36BQ9NZH7 164 aa10.54□□□□□ -0.72
ZNF558-205ENST00000597304 C15orf62A8K5M9 175 aa10.54□□□□□ -0.72
ZNF558-205ENST00000597304 THBS3P49746 956 aa10.54□□□□□ -0.72
ZNF558-205ENST00000597304 EIF4EBP1Q13541 118 aaPredicted RBP10.54□□□□□ -0.72
ZNF558-205ENST00000597304 C21orf62-AS1Q17RA5 79 aa10.54□□□□□ -0.72
ZNF558-205ENST00000597304 MCEMP1Q8IX19 187 aa10.54□□□□□ -0.72
ZNF558-205ENST00000597304 OCC1Q8TAD7 63 aa10.54□□□□□ -0.72
ZNF558-205ENST00000597304 TMEM204Q9BSN7 226 aa10.54□□□□□ -0.72
ZNF558-205ENST00000597304 POLDIP2Q9Y2S7 368 aa10.54□□□□□ -0.72
ZNF558-205ENST00000597304 KMT2EQ8IZD2 1858 aa10.53□□□□□ -0.72
ZNF558-205ENST00000597304 MED12LQ86YW9 2145 aa10.53□□□□□ -0.72
ZNF558-205ENST00000597304 WDFY3Q8IZQ1 3526 aa10.53□□□□□ -0.72
ZNF558-205ENST00000597304 SH2D1BO14796 132 aa10.53□□□□□ -0.72
ZNF558-205ENST00000597304 NXPH2O95156 264 aa10.53□□□□□ -0.72
ZNF558-205ENST00000597304 TRIP6Q15654 476 aaKnown RBP10.53□□□□□ -0.72
ZNF558-205ENST00000597304 COL5A1-AS1Q5SY13 56 aa10.53□□□□□ -0.72
ZNF558-205ENST00000597304 OR1L6Q8NGR2 347 aa10.53□□□□□ -0.72
ZNF558-205ENST00000597304 TAAR6Q96RI8 345 aa10.53□□□□□ -0.72
ZNF558-205ENST00000597304 WDR87Q6ZQQ6 2873 aa10.53□□□□□ -0.72
ZNF558-205ENST00000597304 PINLYPA6NC86 204 aa10.53□□□□□ -0.72
ZNF558-205ENST00000597304 FCN1O00602 326 aa10.53□□□□□ -0.72
ZNF558-205ENST00000597304 NEURL1O76050 574 aa10.53□□□□□ -0.72
ZNF558-205ENST00000597304 CXorf1O96002 111 aa10.53□□□□□ -0.72
ZNF558-205ENST00000597304 BRWD1-AS2P59051 145 aa10.53□□□□□ -0.72
ZNF558-205ENST00000597304 SPATA46Q5T0L3 261 aa10.53□□□□□ -0.72
ZNF558-205ENST00000597304 SCCPDHQ8NBX0 429 aa10.53□□□□□ -0.72
ZNF558-205ENST00000597304 OR4B1Q8NGF8 309 aa10.53□□□□□ -0.72
ZNF558-205ENST00000597304 NINJ1Q92982 152 aa10.53□□□□□ -0.72
ZNF558-205ENST00000597304 MPDU1O75352 247 aa10.52□□□□□ -0.73
ZNF558-205ENST00000597304 STAG3L2P0CL84 134 aa10.52□□□□□ -0.73
ZNF558-205ENST00000597304 STAG3L3P0CL85 134 aa10.52□□□□□ -0.73
ZNF558-205ENST00000597304 COMPP49747 757 aaPredicted RBP10.52□□□□□ -0.73
ZNF558-205ENST00000597304 ERVK11-1P61568 191 aa10.52□□□□□ -0.73
ZNF558-205ENST00000597304 ZNF146Q15072 292 aa10.52□□□□□ -0.73
ZNF558-205ENST00000597304 DMRTA1Q5VZB9 504 aa10.52□□□□□ -0.73
ZNF558-205ENST00000597304 WDR86Q86TI4 376 aa10.52□□□□□ -0.73
ZNF558-205ENST00000597304 TCTEX1D1Q8N7M0 179 aa10.52□□□□□ -0.73
ZNF558-205ENST00000597304 OR52L2PQ8NGH6 319 aa10.52□□□□□ -0.73
ZNF558-205ENST00000597304 OPN3Q9H1Y3 402 aaPredicted RBP10.52□□□□□ -0.73
ZNF558-205ENST00000597304 MRPS17Q9Y2R5 130 aaKnown RBP10.52□□□□□ -0.73
ZNF558-205ENST00000597304 YLPM1P49750 1951 aaKnown RBP10.52□□□□□ -0.73
ZNF558-205ENST00000597304 TMEM30CPA0ZSE6 113 aa10.52□□□□□ -0.73
ZNF558-205ENST00000597304 SLC17A3O00476 420 aa10.52□□□□□ -0.73
ZNF558-205ENST00000597304 OPRK1P41145 380 aa10.52□□□□□ -0.73
ZNF558-205ENST00000597304 Q0VG73 95 aa10.52□□□□□ -0.73
ZNF558-205ENST00000597304 TMPRSS7Q7RTY8 843 aa10.52□□□□□ -0.73
ZNF558-205ENST00000597304 SIGLECL1Q8N7X8 197 aa10.52□□□□□ -0.73
ZNF558-205ENST00000597304 APH1AQ96BI3 265 aa10.52□□□□□ -0.73
ZNF558-205ENST00000597304 R4GN57 208 aa10.52□□□□□ -0.73
ZNF558-205ENST00000597304 GTF3C1Q12789 2109 aa10.51□□□□□ -0.73
ZNF558-205ENST00000597304 A8MXE2 369 aa10.51□□□□□ -0.73
ZNF558-205ENST00000597304 SNURFLB1AK76 121 aa10.51□□□□□ -0.73
ZNF558-205ENST00000597304 C12orf77C9JDV5 145 aa10.51□□□□□ -0.73
ZNF558-205ENST00000597304 F2Z2F3 143 aa10.51□□□□□ -0.73
ZNF558-205ENST00000597304 CCL4P13236 92 aa10.51□□□□□ -0.73
ZNF558-205ENST00000597304 IER3P46695 156 aa10.51□□□□□ -0.73
ZNF558-205ENST00000597304 RAB7AP51149 207 aa10.51□□□□□ -0.73
ZNF558-205ENST00000597304 ZXDAP98168 799 aa10.51□□□□□ -0.73
ZNF558-205ENST00000597304 HLA-DRB5Q30154 266 aa10.51□□□□□ -0.73
ZNF558-205ENST00000597304 PDLIM3Q53GG5 364 aaPredicted RBP10.51□□□□□ -0.73
ZNF558-205ENST00000597304 KRTCAP3Q53RY4 240 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms