RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 ABCA11PQ4W5N1 156 aa11.43□□□□□ -0.58
VRK3-213ENST00000597215 Q8N9W7 124 aa11.43□□□□□ -0.58
VRK3-213ENST00000597215 OR51S1Q8NGJ8 323 aa11.43□□□□□ -0.58
VRK3-213ENST00000597215 ZFAND1Q8TCF1 268 aa11.43□□□□□ -0.58
VRK3-213ENST00000597215 ZNF486Q96H40 463 aaPredicted RBP11.43□□□□□ -0.58
VRK3-213ENST00000597215 RITA1Q96K30 269 aa11.43□□□□□ -0.58
VRK3-213ENST00000597215 GPHA2Q96T91 129 aa11.43□□□□□ -0.58
VRK3-213ENST00000597215 TSNAXQ99598 290 aaKnown RBP11.43□□□□□ -0.58
VRK3-213ENST00000597215 CCDC32Q9BV29 185 aa11.43□□□□□ -0.58
VRK3-213ENST00000597215 ZNF702PQ9H963 129 aa11.43□□□□□ -0.58
VRK3-213ENST00000597215 BEX1Q9HBH7 125 aa11.43□□□□□ -0.58
VRK3-213ENST00000597215 HRASLSQ9HDD0 168 aa11.43□□□□□ -0.58
VRK3-213ENST00000597215 A0A1B0GUS0 222 aa11.42□□□□□ -0.58
VRK3-213ENST00000597215 SHOXO15266 292 aa11.42□□□□□ -0.58
VRK3-213ENST00000597215 PGLYRP1O75594 196 aaPredicted RBP11.42□□□□□ -0.58
VRK3-213ENST00000597215 NDUFA3O95167 84 aa11.42□□□□□ -0.58
VRK3-213ENST00000597215 SPDEFO95238 335 aa11.42□□□□□ -0.58
VRK3-213ENST00000597215 CRYZL1O95825 349 aa11.42□□□□□ -0.58
VRK3-213ENST00000597215 RLN1P04808 185 aa11.42□□□□□ -0.58
VRK3-213ENST00000597215 IL7P13232 177 aa11.42□□□□□ -0.58
VRK3-213ENST00000597215 CNTFRP26992 372 aa11.42□□□□□ -0.58
VRK3-213ENST00000597215 CD40LGP29965 261 aa11.42□□□□□ -0.58
VRK3-213ENST00000597215 LGALS7P47929 136 aa11.42□□□□□ -0.58
VRK3-213ENST00000597215 BLCAPP62952 87 aa11.42□□□□□ -0.58
VRK3-213ENST00000597215 ZNF846Q147U1 533 aa11.42□□□□□ -0.58
VRK3-213ENST00000597215 SURF2Q15527 256 aaPredicted RBP11.42□□□□□ -0.58
VRK3-213ENST00000597215 PHLDA2Q53GA4 152 aa11.42□□□□□ -0.58
VRK3-213ENST00000597215 TMEM177Q53S58 311 aa11.42□□□□□ -0.58
VRK3-213ENST00000597215 ARSJQ5FYB0 599 aaPredicted RBP11.42□□□□□ -0.58
VRK3-213ENST00000597215 OR2B11Q5JQS5 317 aa11.42□□□□□ -0.58
VRK3-213ENST00000597215 IDO2Q6ZQW0 420 aa11.42□□□□□ -0.58
VRK3-213ENST00000597215 Q8N2B8 174 aa11.42□□□□□ -0.58
VRK3-213ENST00000597215 FAM71E2Q8N5Q1 922 aa11.42□□□□□ -0.58
VRK3-213ENST00000597215 POC5Q8NA72 575 aa11.42□□□□□ -0.58
VRK3-213ENST00000597215 NPBQ8NG41 125 aa11.42□□□□□ -0.58
VRK3-213ENST00000597215 OR51H1Q8NH63 302 aa11.42□□□□□ -0.58
VRK3-213ENST00000597215 OR4S2Q8NH73 311 aa11.42□□□□□ -0.58
VRK3-213ENST00000597215 OR2T6Q8NHC8 308 aa11.42□□□□□ -0.58
VRK3-213ENST00000597215 HARBI1Q96MB7 349 aa11.42□□□□□ -0.58
VRK3-213ENST00000597215 RASL11BQ9BPW5 248 aa11.42□□□□□ -0.58
VRK3-213ENST00000597215 LIN7CQ9NUP9 197 aaKnown RBP11.42□□□□□ -0.58
VRK3-213ENST00000597215 RRHO14718 337 aa11.41□□□□□ -0.58
VRK3-213ENST00000597215 PEX14O75381 377 aa11.41□□□□□ -0.58
VRK3-213ENST00000597215 MDKP21741 143 aaPredicted RBP11.41□□□□□ -0.58
VRK3-213ENST00000597215 RND3P61587 244 aa11.41□□□□□ -0.58
VRK3-213ENST00000597215 C5orf64Q2M2E5 130 aa11.41□□□□□ -0.58
VRK3-213ENST00000597215 C9orf152Q5JTZ5 239 aa11.41□□□□□ -0.58
VRK3-213ENST00000597215 SPAG16Q8N0X2 631 aa11.41□□□□□ -0.58
VRK3-213ENST00000597215 OR13C8Q8NGS7 320 aa11.41□□□□□ -0.58
VRK3-213ENST00000597215 LINC01006Q8NI28 216 aa11.41□□□□□ -0.58
VRK3-213ENST00000597215 OSR1Q8TAX0 266 aaPredicted RBP11.41□□□□□ -0.58
VRK3-213ENST00000597215 MARCH1Q8TCQ1 289 aa11.41□□□□□ -0.58
VRK3-213ENST00000597215 CD300LFQ8TDQ1 290 aa11.41□□□□□ -0.58
VRK3-213ENST00000597215 MRGPRFQ96AM1 343 aa11.41□□□□□ -0.58
VRK3-213ENST00000597215 MDFIQ99750 246 aa11.41□□□□□ -0.58
VRK3-213ENST00000597215 SLC2A9Q9NRM0 540 aa11.41□□□□□ -0.58
VRK3-213ENST00000597215 MMP24Q9Y5R2 645 aa11.41□□□□□ -0.58
VRK3-213ENST00000597215 DNHD1Q96M86 4753 aa11.41□□□□□ -0.58
VRK3-213ENST00000597215 CLPSL1A2RUU4 121 aa11.4□□□□□ -0.58
VRK3-213ENST00000597215 NAP1L6A6NFF2 107 aa11.4□□□□□ -0.58
VRK3-213ENST00000597215 SH2D7A6NKC9 451 aaPredicted RBP11.4□□□□□ -0.58
VRK3-213ENST00000597215 CENPXA8MT69 81 aa11.4□□□□□ -0.58
VRK3-213ENST00000597215 RBFOX2O43251 390 aaKnown RBP eCLIP11.4□□□□□ -0.58
VRK3-213ENST00000597215 CTSDP07339 412 aaPredicted RBP11.4□□□□□ -0.58
VRK3-213ENST00000597215 COMPP49747 757 aaPredicted RBP11.4□□□□□ -0.58
VRK3-213ENST00000597215 PLGLAQ15195 96 aa11.4□□□□□ -0.58
VRK3-213ENST00000597215 PSG5Q15238 335 aa11.4□□□□□ -0.58
VRK3-213ENST00000597215 AWAT1Q58HT5 328 aa11.4□□□□□ -0.58
VRK3-213ENST00000597215 TCTEX1D1Q8N7M0 179 aa11.4□□□□□ -0.58
VRK3-213ENST00000597215 CCDC71LQ8N9Z2 235 aa11.4□□□□□ -0.58
VRK3-213ENST00000597215 SCGB3A2Q96PL1 93 aa11.4□□□□□ -0.58
VRK3-213ENST00000597215 C7orf50Q9BRJ6 194 aaKnown RBP11.4□□□□□ -0.58
VRK3-213ENST00000597215 METTL1Q9UBP6 276 aaKnown RBP11.4□□□□□ -0.58
VRK3-213ENST00000597215 C14orf166Q9Y224 244 aaKnown RBP11.4□□□□□ -0.58
VRK3-213ENST00000597215 SLC25A17O43808 307 aa11.39□□□□□ -0.59
VRK3-213ENST00000597215 IGLV2-23P01705 113 aa11.39□□□□□ -0.59
VRK3-213ENST00000597215 PI3P19957 117 aa11.39□□□□□ -0.59
VRK3-213ENST00000597215 F2RP25116 425 aa11.39□□□□□ -0.59
VRK3-213ENST00000597215 VDAC2P45880 294 aaPredicted RBP11.39□□□□□ -0.59
VRK3-213ENST00000597215 PIGPP57054 158 aa11.39□□□□□ -0.59
VRK3-213ENST00000597215 BRWD1-AS2P59051 145 aa11.39□□□□□ -0.59
VRK3-213ENST00000597215 VMA21Q3ZAQ7 101 aa11.39□□□□□ -0.59
VRK3-213ENST00000597215 Q6ZS46 218 aa11.39□□□□□ -0.59
VRK3-213ENST00000597215 TBC1D26Q86UD7 250 aa11.39□□□□□ -0.59
VRK3-213ENST00000597215 FBXL15Q9H469 300 aa11.39□□□□□ -0.59
VRK3-213ENST00000597215 COPZ2Q9P299 210 aa11.39□□□□□ -0.59
VRK3-213ENST00000597215 GPR132Q9UNW8 380 aa11.39□□□□□ -0.59
VRK3-213ENST00000597215 SIGLEC9Q9Y336 463 aa11.39□□□□□ -0.59
VRK3-213ENST00000597215 RNF114Q9Y508 228 aa11.39□□□□□ -0.59
VRK3-213ENST00000597215 LINC00854A0A1B0GVQ3 168 aa11.38□□□□□ -0.59
VRK3-213ENST00000597215 MPPED1O15442 326 aa11.38□□□□□ -0.59
VRK3-213ENST00000597215 KCNAB3O43448 404 aa11.38□□□□□ -0.59
VRK3-213ENST00000597215 RAMP3O60896 148 aa11.38□□□□□ -0.59
VRK3-213ENST00000597215 HRASP01112 189 aa11.38□□□□□ -0.59
VRK3-213ENST00000597215 HLA-DRB1P01911 266 aa11.38□□□□□ -0.59
VRK3-213ENST00000597215 UBE2KP61086 200 aa11.38□□□□□ -0.59
VRK3-213ENST00000597215 LIN54Q6MZP7 749 aa11.38□□□□□ -0.59
VRK3-213ENST00000597215 SLC35E3Q7Z769 313 aa11.38□□□□□ -0.59
VRK3-213ENST00000597215 SLC25A21Q9BQT8 299 aaPredicted RBP11.38□□□□□ -0.59
VRK3-213ENST00000597215 AIFM2Q9BRQ8 373 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms