RNA–Protein interactions for RNA: ENST00000596445.5

VRK3-211, Transcript of vaccinia related kinase 3, humanhuman

TSL 5

Gene VRK3, Length 840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-211ENST00000596445 TMEM177Q53S58 311 aa6.65□□□□□ -1.34
VRK3-211ENST00000596445 TRIQKQ629K1 86 aa6.65□□□□□ -1.34
VRK3-211ENST00000596445 ZNF57Q68EA5 555 aaPredicted RBP6.65□□□□□ -1.34
VRK3-211ENST00000596445 Q8N2B8 174 aa6.65□□□□□ -1.34
VRK3-211ENST00000596445 FAM71E2Q8N5Q1 922 aa6.65□□□□□ -1.34
VRK3-211ENST00000596445 Q8N9W7 124 aa6.65□□□□□ -1.34
VRK3-211ENST00000596445 NPBQ8NG41 125 aa6.65□□□□□ -1.34
VRK3-211ENST00000596445 OR51S1Q8NGJ8 323 aa6.65□□□□□ -1.34
VRK3-211ENST00000596445 ZFAND1Q8TCF1 268 aa6.65□□□□□ -1.34
VRK3-211ENST00000596445 TCTEX1D2Q8WW35 142 aa6.65□□□□□ -1.34
VRK3-211ENST00000596445 TAF15Q92804 592 aaKnown RBP eCLIP6.65□□□□□ -1.34
VRK3-211ENST00000596445 MRGPRFQ96AM1 343 aa6.65□□□□□ -1.34
VRK3-211ENST00000596445 ZNF486Q96H40 463 aaPredicted RBP6.65□□□□□ -1.34
VRK3-211ENST00000596445 GPHA2Q96T91 129 aa6.65□□□□□ -1.34
VRK3-211ENST00000596445 TSNAXQ99598 290 aaKnown RBP6.65□□□□□ -1.34
VRK3-211ENST00000596445 MDFIQ99750 246 aa6.65□□□□□ -1.34
VRK3-211ENST00000596445 CCDC32Q9BV29 185 aa6.65□□□□□ -1.34
VRK3-211ENST00000596445 ZNF702PQ9H963 129 aa6.65□□□□□ -1.34
VRK3-211ENST00000596445 BEX1Q9HBH7 125 aa6.65□□□□□ -1.34
VRK3-211ENST00000596445 HRASLSQ9HDD0 168 aa6.65□□□□□ -1.34
VRK3-211ENST00000596445 MCUBQ9NWR8 336 aa6.65□□□□□ -1.34
VRK3-211ENST00000596445 SLC2A8Q9NY64 477 aa6.65□□□□□ -1.34
VRK3-211ENST00000596445 MMP24Q9Y5R2 645 aa6.65□□□□□ -1.34
VRK3-211ENST00000596445 ANK2Q01484 3957 aa6.65□□□□□ -1.35
VRK3-211ENST00000596445 PLXNB1O43157 2135 aa6.64□□□□□ -1.35
VRK3-211ENST00000596445 RRHO14718 337 aa6.64□□□□□ -1.35
VRK3-211ENST00000596445 SHOXO15266 292 aa6.64□□□□□ -1.35
VRK3-211ENST00000596445 RBFOX2O43251 390 aaKnown RBP eCLIP6.64□□□□□ -1.35
VRK3-211ENST00000596445 FCGR3BO75015 233 aa6.64□□□□□ -1.35
VRK3-211ENST00000596445 NDUFA3O95167 84 aa6.64□□□□□ -1.35
VRK3-211ENST00000596445 SPDEFO95238 335 aa6.64□□□□□ -1.35
VRK3-211ENST00000596445 CRYZL1O95825 349 aa6.64□□□□□ -1.35
VRK3-211ENST00000596445 RLN1P04808 185 aa6.64□□□□□ -1.35
VRK3-211ENST00000596445 CNTFRP26992 372 aa6.64□□□□□ -1.35
VRK3-211ENST00000596445 CD40LGP29965 261 aa6.64□□□□□ -1.35
VRK3-211ENST00000596445 COMPP49747 757 aaPredicted RBP6.64□□□□□ -1.35
VRK3-211ENST00000596445 BRWD1-AS2P59051 145 aa6.64□□□□□ -1.35
VRK3-211ENST00000596445 RND3P61587 244 aa6.64□□□□□ -1.35
VRK3-211ENST00000596445 CATR1Q13166 79 aa6.64□□□□□ -1.35
VRK3-211ENST00000596445 ZNF846Q147U1 533 aa6.64□□□□□ -1.35
VRK3-211ENST00000596445 SURF2Q15527 256 aaPredicted RBP6.64□□□□□ -1.35
VRK3-211ENST00000596445 C5orf64Q2M2E5 130 aa6.64□□□□□ -1.35
VRK3-211ENST00000596445 PHLDA2Q53GA4 152 aa6.64□□□□□ -1.35
VRK3-211ENST00000596445 OR2B11Q5JQS5 317 aa6.64□□□□□ -1.35
VRK3-211ENST00000596445 IDO2Q6ZQW0 420 aa6.64□□□□□ -1.35
VRK3-211ENST00000596445 Q6ZS46 218 aa6.64□□□□□ -1.35
VRK3-211ENST00000596445 POC5Q8NA72 575 aa6.64□□□□□ -1.35
VRK3-211ENST00000596445 OR13C8Q8NGS7 320 aa6.64□□□□□ -1.35
VRK3-211ENST00000596445 OR4S2Q8NH73 311 aa6.64□□□□□ -1.35
VRK3-211ENST00000596445 OR2T6Q8NHC8 308 aa6.64□□□□□ -1.35
VRK3-211ENST00000596445 LINC01006Q8NI28 216 aa6.64□□□□□ -1.35
VRK3-211ENST00000596445 OSR1Q8TAX0 266 aaPredicted RBP6.64□□□□□ -1.35
VRK3-211ENST00000596445 MARCH1Q8TCQ1 289 aa6.64□□□□□ -1.35
VRK3-211ENST00000596445 CD300LFQ8TDQ1 290 aa6.64□□□□□ -1.35
VRK3-211ENST00000596445 RASL11BQ9BPW5 248 aa6.64□□□□□ -1.35
VRK3-211ENST00000596445 WDR12Q9GZL7 423 aaKnown RBP6.64□□□□□ -1.35
VRK3-211ENST00000596445 SLC2A9Q9NRM0 540 aa6.64□□□□□ -1.35
VRK3-211ENST00000596445 LIN7CQ9NUP9 197 aaKnown RBP6.64□□□□□ -1.35
VRK3-211ENST00000596445 KIAA1456Q9P272 454 aa6.64□□□□□ -1.35
VRK3-211ENST00000596445 CLPSL1A2RUU4 121 aa6.63□□□□□ -1.35
VRK3-211ENST00000596445 NAP1L6A6NFF2 107 aa6.63□□□□□ -1.35
VRK3-211ENST00000596445 SH2D7A6NKC9 451 aaPredicted RBP6.63□□□□□ -1.35
VRK3-211ENST00000596445 SRRM4A7MD48 611 aaKnown RBP6.63□□□□□ -1.35
VRK3-211ENST00000596445 MPPED1O15442 326 aa6.63□□□□□ -1.35
VRK3-211ENST00000596445 RAMP3O60896 148 aa6.63□□□□□ -1.35
VRK3-211ENST00000596445 PEX14O75381 377 aa6.63□□□□□ -1.35
VRK3-211ENST00000596445 IGLV2-23P01705 113 aa6.63□□□□□ -1.35
VRK3-211ENST00000596445 IGHG2P01859 326 aa6.63□□□□□ -1.35
VRK3-211ENST00000596445 HLA-DRB1P01911 266 aa6.63□□□□□ -1.35
VRK3-211ENST00000596445 CTSDP07339 412 aaPredicted RBP6.63□□□□□ -1.35
VRK3-211ENST00000596445 MDKP21741 143 aaPredicted RBP6.63□□□□□ -1.35
VRK3-211ENST00000596445 F2RP25116 425 aa6.63□□□□□ -1.35
VRK3-211ENST00000596445 PIGPP57054 158 aa6.63□□□□□ -1.35
VRK3-211ENST00000596445 PLGLAQ15195 96 aa6.63□□□□□ -1.35
VRK3-211ENST00000596445 PSG5Q15238 335 aa6.63□□□□□ -1.35
VRK3-211ENST00000596445 AWAT1Q58HT5 328 aa6.63□□□□□ -1.35
VRK3-211ENST00000596445 C9orf152Q5JTZ5 239 aa6.63□□□□□ -1.35
VRK3-211ENST00000596445 TBC1D26Q86UD7 250 aa6.63□□□□□ -1.35
VRK3-211ENST00000596445 SPAG16Q8N0X2 631 aa6.63□□□□□ -1.35
VRK3-211ENST00000596445 TCTEX1D1Q8N7M0 179 aa6.63□□□□□ -1.35
VRK3-211ENST00000596445 OR51H1Q8NH63 302 aa6.63□□□□□ -1.35
VRK3-211ENST00000596445 HARBI1Q96MB7 349 aa6.63□□□□□ -1.35
VRK3-211ENST00000596445 SCGB3A2Q96PL1 93 aa6.63□□□□□ -1.35
VRK3-211ENST00000596445 C7orf50Q9BRJ6 194 aaKnown RBP6.63□□□□□ -1.35
VRK3-211ENST00000596445 FAM212BQ9NTI7 297 aaPredicted RBP6.63□□□□□ -1.35
VRK3-211ENST00000596445 METTL1Q9UBP6 276 aaKnown RBP6.63□□□□□ -1.35
VRK3-211ENST00000596445 GPR132Q9UNW8 380 aa6.63□□□□□ -1.35
VRK3-211ENST00000596445 C14orf166Q9Y224 244 aaKnown RBP6.63□□□□□ -1.35
VRK3-211ENST00000596445 RNF114Q9Y508 228 aa6.63□□□□□ -1.35
VRK3-211ENST00000596445 TNCP24821 2201 aa6.62□□□□□ -1.35
VRK3-211ENST00000596445 CENPXA8MT69 81 aa6.62□□□□□ -1.35
VRK3-211ENST00000596445 KCNAB3O43448 404 aa6.62□□□□□ -1.35
VRK3-211ENST00000596445 SLC25A17O43808 307 aa6.62□□□□□ -1.35
VRK3-211ENST00000596445 HPRT1P00492 218 aa6.62□□□□□ -1.35
VRK3-211ENST00000596445 HRASP01112 189 aa6.62□□□□□ -1.35
VRK3-211ENST00000596445 PI3P19957 117 aa6.62□□□□□ -1.35
VRK3-211ENST00000596445 VDAC2P45880 294 aaPredicted RBP6.62□□□□□ -1.35
VRK3-211ENST00000596445 UBE2KP61086 200 aa6.62□□□□□ -1.35
VRK3-211ENST00000596445 VMA21Q3ZAQ7 101 aa6.62□□□□□ -1.35
VRK3-211ENST00000596445 ARSJQ5FYB0 599 aaPredicted RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms