RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 FAM103A1Q9BTL3 118 aaKnown RBP8.72□□□□□ -1.01
VRK3-210ENST00000596121 SLIRPQ9GZT3 109 aaKnown RBP8.72□□□□□ -1.01
VRK3-210ENST00000596121 KLK15Q9H2R5 256 aa8.72□□□□□ -1.01
VRK3-210ENST00000596121 IFT46Q9NQC8 304 aa8.72□□□□□ -1.01
VRK3-210ENST00000596121 PARP11Q9NR21 331 aa8.72□□□□□ -1.01
VRK3-210ENST00000596121 TAS2R8Q9NYW2 309 aa8.72□□□□□ -1.01
VRK3-210ENST00000596121 NUBP2Q9Y5Y2 271 aa8.72□□□□□ -1.01
VRK3-210ENST00000596121 SMIM31A0A1B0GVY4 71 aa8.71□□□□□ -1.02
VRK3-210ENST00000596121 TNFSF12O43508 249 aa8.71□□□□□ -1.02
VRK3-210ENST00000596121 FCGR3BO75015 233 aa8.71□□□□□ -1.02
VRK3-210ENST00000596121 SPDEFO95238 335 aa8.71□□□□□ -1.02
VRK3-210ENST00000596121 CRYZL1O95825 349 aa8.71□□□□□ -1.02
VRK3-210ENST00000596121 IGLV1-40P01703 118 aa8.71□□□□□ -1.02
VRK3-210ENST00000596121 PSMB8P28062 276 aa8.71□□□□□ -1.02
VRK3-210ENST00000596121 HRH1P35367 487 aa8.71□□□□□ -1.02
VRK3-210ENST00000596121 FXYD4P59646 89 aa8.71□□□□□ -1.02
VRK3-210ENST00000596121 SLC35B1P78383 322 aa8.71□□□□□ -1.02
VRK3-210ENST00000596121 PLGLAQ15195 96 aa8.71□□□□□ -1.02
VRK3-210ENST00000596121 OR2B11Q5JQS5 317 aa8.71□□□□□ -1.02
VRK3-210ENST00000596121 TEX38Q6PEX7 206 aa8.71□□□□□ -1.02
VRK3-210ENST00000596121 ZNF818PQ6ZRF7 136 aa8.71□□□□□ -1.02
VRK3-210ENST00000596121 MFSD4AQ8N468 514 aa8.71□□□□□ -1.02
VRK3-210ENST00000596121 OR52I2Q8NH67 350 aa8.71□□□□□ -1.02
VRK3-210ENST00000596121 ADTRPQ96IZ2 230 aa8.71□□□□□ -1.02
VRK3-210ENST00000596121 HARBI1Q96MB7 349 aa8.71□□□□□ -1.02
VRK3-210ENST00000596121 TSNAXQ99598 290 aaKnown RBP8.71□□□□□ -1.02
VRK3-210ENST00000596121 RBM38Q9H0Z9 239 aaKnown RBP8.71□□□□□ -1.02
VRK3-210ENST00000596121 SCPEP1Q9HB40 452 aa8.71□□□□□ -1.02
VRK3-210ENST00000596121 EHFQ9NZC4 300 aa8.71□□□□□ -1.02
VRK3-210ENST00000596121 CCDC59Q9P031 241 aaKnown RBP8.71□□□□□ -1.02
VRK3-210ENST00000596121 KLK11Q9UBX7 282 aa8.71□□□□□ -1.02
VRK3-210ENST00000596121 SCOCQ9UIL1 159 aa8.71□□□□□ -1.02
VRK3-210ENST00000596121 ADAM30Q9UKF2 790 aa8.71□□□□□ -1.02
VRK3-210ENST00000596121 TRAV41A0A0B4J266 112 aa8.7□□□□□ -1.02
VRK3-210ENST00000596121 SHOXO15266 292 aa8.7□□□□□ -1.02
VRK3-210ENST00000596121 SLC22A5O76082 557 aa8.7□□□□□ -1.02
VRK3-210ENST00000596121 RRASP10301 218 aa8.7□□□□□ -1.02
VRK3-210ENST00000596121 VDAC1P21796 283 aa8.7□□□□□ -1.02
VRK3-210ENST00000596121 GNRHRP30968 328 aa8.7□□□□□ -1.02
VRK3-210ENST00000596121 LGALS7P47929 136 aa8.7□□□□□ -1.02
VRK3-210ENST00000596121 CRIP2P52943 208 aaPredicted RBP8.7□□□□□ -1.02
VRK3-210ENST00000596121 TAGLNQ01995 201 aaKnown RBP8.7□□□□□ -1.02
VRK3-210ENST00000596121 FOXE3Q13461 319 aa8.7□□□□□ -1.02
VRK3-210ENST00000596121 RTL8BQ17RB0 113 aa8.7□□□□□ -1.02
VRK3-210ENST00000596121 KHDC1LQ5JSQ8 128 aa8.7□□□□□ -1.02
VRK3-210ENST00000596121 ASPHD1Q5U4P2 390 aa8.7□□□□□ -1.02
VRK3-210ENST00000596121 ZNF562Q6V9R5 426 aa8.7□□□□□ -1.02
VRK3-210ENST00000596121 IDO2Q6ZQW0 420 aa8.7□□□□□ -1.02
VRK3-210ENST00000596121 C8orf86Q6ZUL3 223 aa8.7□□□□□ -1.02
VRK3-210ENST00000596121 KCTD9Q7L273 389 aa8.7□□□□□ -1.02
VRK3-210ENST00000596121 TMEM17Q86X19 198 aa8.7□□□□□ -1.02
VRK3-210ENST00000596121 C1QL4Q86Z23 238 aa8.7□□□□□ -1.02
VRK3-210ENST00000596121 VKORC1L1Q8N0U8 176 aa8.7□□□□□ -1.02
VRK3-210ENST00000596121 COMMD1Q8N668 190 aa8.7□□□□□ -1.02
VRK3-210ENST00000596121 OR4F17Q8NGA8 305 aa8.7□□□□□ -1.02
VRK3-210ENST00000596121 OR5H2Q8NGV7 314 aa8.7□□□□□ -1.02
VRK3-210ENST00000596121 MYOZ3Q8TDC0 251 aa8.7□□□□□ -1.02
VRK3-210ENST00000596121 CASTOR1Q8WTX7 329 aa8.7□□□□□ -1.02
VRK3-210ENST00000596121 MOB3AQ96BX8 217 aa8.7□□□□□ -1.02
VRK3-210ENST00000596121 OR4F4Q96R69 305 aa8.7□□□□□ -1.02
VRK3-210ENST00000596121 ZNF2Q9BSG1 426 aaPredicted RBP8.7□□□□□ -1.02
VRK3-210ENST00000596121 SLC5A7Q9GZV3 580 aa8.7□□□□□ -1.02
VRK3-210ENST00000596121 NXF2Q9GZY0 626 aaKnown RBP8.7□□□□□ -1.02
VRK3-210ENST00000596121 FXYD6Q9H0Q3 95 aa8.7□□□□□ -1.02
VRK3-210ENST00000596121 A3GALT2U3KPV4 340 aa8.7□□□□□ -1.02
VRK3-210ENST00000596121 G3V4G9 280 aa8.69□□□□□ -1.02
VRK3-210ENST00000596121 M0QYG6 137 aa8.69□□□□□ -1.02
VRK3-210ENST00000596121 SULT1C2O00338 296 aa8.69□□□□□ -1.02
VRK3-210ENST00000596121 RGS5O15539 181 aa8.69□□□□□ -1.02
VRK3-210ENST00000596121 RAMP3O60896 148 aa8.69□□□□□ -1.02
VRK3-210ENST00000596121 ELANEP08246 267 aa8.69□□□□□ -1.02
VRK3-210ENST00000596121 UBE2KP61086 200 aa8.69□□□□□ -1.02
VRK3-210ENST00000596121 DGCR2P98153 550 aa8.69□□□□□ -1.02
VRK3-210ENST00000596121 FXYD3Q14802 87 aa8.69□□□□□ -1.02
VRK3-210ENST00000596121 MSMO1Q15800 293 aa8.69□□□□□ -1.02
VRK3-210ENST00000596121 ECSCRQ19T08 205 aa8.69□□□□□ -1.02
VRK3-210ENST00000596121 ZNF66Q6ZN08 573 aa8.69□□□□□ -1.02
VRK3-210ENST00000596121 PPP1R27Q86WC6 154 aa8.69□□□□□ -1.02
VRK3-210ENST00000596121 WFDC9Q8NEX5 89 aa8.69□□□□□ -1.02
VRK3-210ENST00000596121 TCTEX1D2Q8WW35 142 aa8.69□□□□□ -1.02
VRK3-210ENST00000596121 RAX2Q96IS3 184 aa8.69□□□□□ -1.02
VRK3-210ENST00000596121 DUX3Q96PT4 197 aa8.69□□□□□ -1.02
VRK3-210ENST00000596121 HSD17B10Q99714 261 aaKnown RBP8.69□□□□□ -1.02
VRK3-210ENST00000596121 TINAGL1Q9GZM7 467 aaPredicted RBP8.69□□□□□ -1.02
VRK3-210ENST00000596121 ZFP57Q9NU63 452 aa8.69□□□□□ -1.02
VRK3-210ENST00000596121 SAA1P0DJI8 122 aaPredicted RBP8.68□□□□□ -1.02
VRK3-210ENST00000596121 RCVRNP35243 200 aa8.68□□□□□ -1.02
VRK3-210ENST00000596121 TAS2R46P59540 309 aa8.68□□□□□ -1.02
VRK3-210ENST00000596121 GNB1P62873 340 aa8.68□□□□□ -1.02
VRK3-210ENST00000596121 PRSS8Q16651 343 aa8.68□□□□□ -1.02
VRK3-210ENST00000596121 DEFB136Q30KP8 78 aa8.68□□□□□ -1.02
VRK3-210ENST00000596121 SAMD5Q5TGI4 173 aa8.68□□□□□ -1.02
VRK3-210ENST00000596121 ZNF695Q8IW36 515 aa8.68□□□□□ -1.02
VRK3-210ENST00000596121 MRPL41Q8IXM3 137 aaKnown RBP8.68□□□□□ -1.02
VRK3-210ENST00000596121 LINC00482Q8N8I6 264 aa8.68□□□□□ -1.02
VRK3-210ENST00000596121 TEX45Q8NA69 505 aa8.68□□□□□ -1.02
VRK3-210ENST00000596121 KLHL30-AS1Q8NEE0 82 aa8.68□□□□□ -1.02
VRK3-210ENST00000596121 LFNGQ8NES3 379 aa8.68□□□□□ -1.02
VRK3-210ENST00000596121 OR4D10Q8NGI6 311 aa8.68□□□□□ -1.02
VRK3-210ENST00000596121 OSR1Q8TAX0 266 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms