RNA–Protein interactions for RNA: ENST00000595792.1

PNKP-206, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 645 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-206ENST00000595792 FOXA2Q9Y261 457 aaPredicted RBP13.78□□□□□ -0.2
PNKP-206ENST00000595792 ZNF256Q9Y2P7 627 aaPredicted RBP13.78□□□□□ -0.2
PNKP-206ENST00000595792 NFYAP23511 347 aaPredicted RBP13.77□□□□□ -0.21
PNKP-206ENST00000595792 DUTP33316 252 aaKnown RBP13.77□□□□□ -0.21
PNKP-206ENST00000595792 UNQ5815/PRO19632Q6UWF5 114 aa13.77□□□□□ -0.21
PNKP-206ENST00000595792 IGHV4OR15-8A0A075B7B6 117 aa13.76□□□□□ -0.21
PNKP-206ENST00000595792 A0A087WW49 117 aa13.76□□□□□ -0.21
PNKP-206ENST00000595792 IGKV1D-13A0A0B4J2D9 117 aa13.76□□□□□ -0.21
PNKP-206ENST00000595792 IGLV2-14P01704 120 aa13.76□□□□□ -0.21
PNKP-206ENST00000595792 IGHV3-11P01762 117 aa13.76□□□□□ -0.21
PNKP-206ENST00000595792 IGKV1-13P0DP09 117 aa13.76□□□□□ -0.21
PNKP-206ENST00000595792 AKIRIN2Q53H80 203 aa13.76□□□□□ -0.21
PNKP-206ENST00000595792 TMEM177Q53S58 311 aa13.76□□□□□ -0.21
PNKP-206ENST00000595792 IDNKQ5T6J7 187 aa13.76□□□□□ -0.21
PNKP-206ENST00000595792 DLX4Q92988 240 aaPredicted RBP13.76□□□□□ -0.21
PNKP-206ENST00000595792 YIPF6Q96EC8 236 aa13.76□□□□□ -0.21
PNKP-206ENST00000595792 MS4A10Q96PG2 267 aa13.76□□□□□ -0.21
PNKP-206ENST00000595792 U3KQK5 164 aa13.76□□□□□ -0.21
PNKP-206ENST00000595792 OVOL1O14753 267 aa13.75□□□□□ -0.21
PNKP-206ENST00000595792 PTHLHP12272 177 aa13.75□□□□□ -0.21
PNKP-206ENST00000595792 RPL30P62888 115 aaKnown RBP13.75□□□□□ -0.21
PNKP-206ENST00000595792 FXYD3Q14802 87 aa13.75□□□□□ -0.21
PNKP-206ENST00000595792 ARL6IP1Q15041 203 aa13.75□□□□□ -0.21
PNKP-206ENST00000595792 ACTBL2Q562R1 376 aa13.75□□□□□ -0.21
PNKP-206ENST00000595792 GVQW1Q8N7I0 195 aa13.75□□□□□ -0.21
PNKP-206ENST00000595792 GRPEL2Q8TAA5 225 aa13.75□□□□□ -0.21
PNKP-206ENST00000595792 ARPC1AQ92747 370 aa13.75□□□□□ -0.21
PNKP-206ENST00000595792 HARBI1Q96MB7 349 aa13.75□□□□□ -0.21
PNKP-206ENST00000595792 DCSTAMPQ9H295 470 aa13.75□□□□□ -0.21
PNKP-206ENST00000595792 RBM7Q9Y580 266 aaKnown RBP13.75□□□□□ -0.21
PNKP-206ENST00000595792 SAP30O75446 220 aa13.74□□□□□ -0.21
PNKP-206ENST00000595792 HLA-DQB1P01920 261 aa13.74□□□□□ -0.21
PNKP-206ENST00000595792 LGALS1P09382 135 aaKnown RBP13.74□□□□□ -0.21
PNKP-206ENST00000595792 GNG2P59768 71 aa13.74□□□□□ -0.21
PNKP-206ENST00000595792 TCTEX1D1Q8N7M0 179 aa13.74□□□□□ -0.21
PNKP-206ENST00000595792 TRAV18A0A075B6X5 111 aa13.73□□□□□ -0.21
PNKP-206ENST00000595792 LINC01619G3V211 115 aa13.73□□□□□ -0.21
PNKP-206ENST00000595792 SHOXO15266 292 aa13.73□□□□□ -0.21
PNKP-206ENST00000595792 NHLRC4P0CG21 123 aaPredicted RBP13.73□□□□□ -0.21
PNKP-206ENST00000595792 LGALS7P47929 136 aa13.73□□□□□ -0.21
PNKP-206ENST00000595792 SCAND1P57086 179 aa13.73□□□□□ -0.21
PNKP-206ENST00000595792 TPPP2P59282 170 aa13.73□□□□□ -0.21
PNKP-206ENST00000595792 TMEM267Q0VDI3 215 aaPredicted RBP13.73□□□□□ -0.21
PNKP-206ENST00000595792 EIF4EBP1Q13541 118 aaPredicted RBP13.73□□□□□ -0.21
PNKP-206ENST00000595792 CNIH2Q6PI25 160 aa13.73□□□□□ -0.21
PNKP-206ENST00000595792 HAPLN4Q86UW8 402 aa13.73□□□□□ -0.21
PNKP-206ENST00000595792 RHOVQ96L33 236 aa13.73□□□□□ -0.21
PNKP-206ENST00000595792 VCX3AQ9NNX9 186 aa13.73□□□□□ -0.21
PNKP-206ENST00000595792 ANXA10Q9UJ72 324 aa13.73□□□□□ -0.21
PNKP-206ENST00000595792 OR2W1Q9Y3N9 320 aa13.73□□□□□ -0.21
PNKP-206ENST00000595792 ETV7Q9Y603 341 aa13.73□□□□□ -0.21
PNKP-206ENST00000595792 TENM3Q9P273 2699 aa13.73□□□□□ -0.21
PNKP-206ENST00000595792 TUSC2O75896 110 aa13.72□□□□□ -0.21
PNKP-206ENST00000595792 SCGNO76038 276 aa13.72□□□□□ -0.21
PNKP-206ENST00000595792 CRYZL1O95825 349 aa13.72□□□□□ -0.21
PNKP-206ENST00000595792 SPNP16150 400 aa13.72□□□□□ -0.21
PNKP-206ENST00000595792 RPS19P39019 145 aaKnown RBP13.72□□□□□ -0.21
PNKP-206ENST00000595792 BRWD1-AS2P59051 145 aa13.72□□□□□ -0.21
PNKP-206ENST00000595792 PITPNAQ00169 270 aa13.72□□□□□ -0.21
PNKP-206ENST00000595792 IDO2Q6ZQW0 420 aa13.72□□□□□ -0.21
PNKP-206ENST00000595792 ZNF645Q8N7E2 425 aa13.72□□□□□ -0.21
PNKP-206ENST00000595792 OR5T1Q8NG75 326 aa13.72□□□□□ -0.21
PNKP-206ENST00000595792 GPHA2Q96T91 129 aa13.72□□□□□ -0.21
PNKP-206ENST00000595792 SPATA2Q9UM82 520 aa13.72□□□□□ -0.21
PNKP-206ENST00000595792 RBMX2Q9Y388 322 aaKnown RBP13.72□□□□□ -0.21
PNKP-206ENST00000595792 TRIM64CA6NLI5 447 aa13.71□□□□□ -0.21
PNKP-206ENST00000595792 RBMXL2O75526 392 aaKnown RBP13.71□□□□□ -0.21
PNKP-206ENST00000595792 FCER2P06734 321 aa13.71□□□□□ -0.21
PNKP-206ENST00000595792 CTXN2P0C2S0 81 aa13.71□□□□□ -0.21
PNKP-206ENST00000595792 INSL3P51460 131 aa13.71□□□□□ -0.21
PNKP-206ENST00000595792 LSM3P62310 102 aaKnown RBP13.71□□□□□ -0.21
PNKP-206ENST00000595792 DEFA5Q01523 94 aa13.71□□□□□ -0.21
PNKP-206ENST00000595792 RTL8BQ17RB0 113 aa13.71□□□□□ -0.21
PNKP-206ENST00000595792 OVCH2Q7RTZ1 564 aa13.71□□□□□ -0.21
PNKP-206ENST00000595792 ZNF429Q86V71 674 aa13.71□□□□□ -0.21
PNKP-206ENST00000595792 TSPAN14Q8NG11 270 aa13.71□□□□□ -0.21
PNKP-206ENST00000595792 ADTRPQ96IZ2 230 aa13.71□□□□□ -0.21
PNKP-206ENST00000595792 AUNIPQ9H7T9 357 aa13.71□□□□□ -0.21
PNKP-206ENST00000595792 TRGV3P03979 118 aa13.7□□□□□ -0.22
PNKP-206ENST00000595792 APELAP0DMC3 54 aa13.7□□□□□ -0.22
PNKP-206ENST00000595792 RRASP10301 218 aa13.7□□□□□ -0.22
PNKP-206ENST00000595792 UBE2KP61086 200 aa13.7□□□□□ -0.22
PNKP-206ENST00000595792 TAGLNQ01995 201 aaKnown RBP13.7□□□□□ -0.22
PNKP-206ENST00000595792 OR2B11Q5JQS5 317 aa13.7□□□□□ -0.22
PNKP-206ENST00000595792 PYHIN1Q6K0P9 492 aa13.7□□□□□ -0.22
PNKP-206ENST00000595792 BEST4Q8NFU0 473 aa13.7□□□□□ -0.22
PNKP-206ENST00000595792 SNAPC3Q92966 411 aa13.7□□□□□ -0.22
PNKP-206ENST00000595792 SMAD5-AS1Q9Y6J3 95 aa13.7□□□□□ -0.22
PNKP-206ENST00000595792 A0A087WXM4 84 aa13.69□□□□□ -0.22
PNKP-206ENST00000595792 AIREO43918 545 aa13.69□□□□□ -0.22
PNKP-206ENST00000595792 FCGR3BO75015 233 aa13.69□□□□□ -0.22
PNKP-206ENST00000595792 TMEM127O75204 238 aa13.69□□□□□ -0.22
PNKP-206ENST00000595792 CNIH1O95406 144 aa13.69□□□□□ -0.22
PNKP-206ENST00000595792 SAA1P0DJI8 122 aaPredicted RBP13.69□□□□□ -0.22
PNKP-206ENST00000595792 PRSS8Q16651 343 aa13.69□□□□□ -0.22
PNKP-206ENST00000595792 TIMM50Q3ZCQ8 353 aa13.69□□□□□ -0.22
PNKP-206ENST00000595792 ACSM6Q6P461 480 aa13.69□□□□□ -0.22
PNKP-206ENST00000595792 HOGA1Q86XE5 327 aa13.69□□□□□ -0.22
PNKP-206ENST00000595792 SBSPONQ8IVN8 264 aa13.69□□□□□ -0.22
PNKP-206ENST00000595792 TEX45Q8NA69 505 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms