RNA–Protein interactions for RNA: ENST00000594504.5

UPF1-203, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-203ENST00000594504 PPYP01298 95 aa9.75□□□□□ -0.85
UPF1-203ENST00000594504 IGKV1-13P0DP09 117 aa9.75□□□□□ -0.85
UPF1-203ENST00000594504 FCGR2CP31995 323 aa9.75□□□□□ -0.85
UPF1-203ENST00000594504 RCVRNP35243 200 aa9.75□□□□□ -0.85
UPF1-203ENST00000594504 CXorf66Q5JRM2 361 aaPredicted RBP9.75□□□□□ -0.85
UPF1-203ENST00000594504 OVCH2Q7RTZ1 564 aa9.75□□□□□ -0.85
UPF1-203ENST00000594504 PDPNQ86YL7 162 aa9.75□□□□□ -0.85
UPF1-203ENST00000594504 NPBQ8NG41 125 aa9.75□□□□□ -0.85
UPF1-203ENST00000594504 OR5H2Q8NGV7 314 aa9.75□□□□□ -0.85
UPF1-203ENST00000594504 MCFD2Q8NI22 146 aa9.75□□□□□ -0.85
UPF1-203ENST00000594504 GIMAP1Q8WWP7 306 aa9.75□□□□□ -0.85
UPF1-203ENST00000594504 ADTRPQ96IZ2 230 aa9.75□□□□□ -0.85
UPF1-203ENST00000594504 ASCL2Q99929 193 aa9.75□□□□□ -0.85
UPF1-203ENST00000594504 NXF2Q9GZY0 626 aaKnown RBP9.75□□□□□ -0.85
UPF1-203ENST00000594504 EHFQ9NZC4 300 aa9.75□□□□□ -0.85
UPF1-203ENST00000594504 RABL2AQ9UBK7 228 aaPredicted RBP9.75□□□□□ -0.85
UPF1-203ENST00000594504 RABL2BQ9UNT1 228 aa9.75□□□□□ -0.85
UPF1-203ENST00000594504 LSM4Q9Y4Z0 139 aaKnown RBP9.75□□□□□ -0.85
UPF1-203ENST00000594504 DNAH9Q9NYC9 4486 aa9.75□□□□□ -0.85
UPF1-203ENST00000594504 J3QRK9 145 aa9.74□□□□□ -0.85
UPF1-203ENST00000594504 NDUFA3O95167 84 aa9.74□□□□□ -0.85
UPF1-203ENST00000594504 AADACP22760 399 aa9.74□□□□□ -0.85
UPF1-203ENST00000594504 SLC6A1P30531 599 aa9.74□□□□□ -0.85
UPF1-203ENST00000594504 DUTP33316 252 aaKnown RBP9.74□□□□□ -0.85
UPF1-203ENST00000594504 ECI1P42126 302 aa9.74□□□□□ -0.85
UPF1-203ENST00000594504 CDX1P47902 265 aaPredicted RBP9.74□□□□□ -0.85
UPF1-203ENST00000594504 RFX2P48378 723 aa9.74□□□□□ -0.85
UPF1-203ENST00000594504 LINC00205P59089 165 aa9.74□□□□□ -0.85
UPF1-203ENST00000594504 MRPS10P82664 201 aaKnown RBP9.74□□□□□ -0.85
UPF1-203ENST00000594504 CBX3Q13185 183 aa9.74□□□□□ -0.85
UPF1-203ENST00000594504 DYRK1AQ13627 763 aa9.74□□□□□ -0.85
UPF1-203ENST00000594504 MSMO1Q15800 293 aa9.74□□□□□ -0.85
UPF1-203ENST00000594504 DIRAS2Q96HU8 199 aa9.74□□□□□ -0.85
UPF1-203ENST00000594504 RITA1Q96K30 269 aa9.74□□□□□ -0.85
UPF1-203ENST00000594504 ABHD1Q96SE0 405 aa9.74□□□□□ -0.85
UPF1-203ENST00000594504 DCUN1D5Q9BTE7 237 aa9.74□□□□□ -0.85
UPF1-203ENST00000594504 SLC35D1Q9NTN3 355 aa9.74□□□□□ -0.85
UPF1-203ENST00000594504 KIAA1456Q9P272 454 aa9.74□□□□□ -0.85
UPF1-203ENST00000594504 RBMX2Q9Y388 322 aaKnown RBP9.74□□□□□ -0.85
UPF1-203ENST00000594504 PMP2P02689 132 aa9.73□□□□□ -0.85
UPF1-203ENST00000594504 IGKV1-16P04430 117 aa9.73□□□□□ -0.85
UPF1-203ENST00000594504 ELANEP08246 267 aa9.73□□□□□ -0.85
UPF1-203ENST00000594504 RRASP10301 218 aa9.73□□□□□ -0.85
UPF1-203ENST00000594504 CNTFRP26992 372 aa9.73□□□□□ -0.85
UPF1-203ENST00000594504 HLA-DMAP28067 261 aa9.73□□□□□ -0.85
UPF1-203ENST00000594504 HRH1P35367 487 aa9.73□□□□□ -0.85
UPF1-203ENST00000594504 HERV-K104P61576 105 aa9.73□□□□□ -0.85
UPF1-203ENST00000594504 CFHR3Q02985 330 aa9.73□□□□□ -0.85
UPF1-203ENST00000594504 FOXE3Q13461 319 aa9.73□□□□□ -0.85
UPF1-203ENST00000594504 RTL8BQ17RB0 113 aa9.73□□□□□ -0.85
UPF1-203ENST00000594504 C5orf64Q2M2E5 130 aa9.73□□□□□ -0.85
UPF1-203ENST00000594504 ACTBL2Q562R1 376 aa9.73□□□□□ -0.85
UPF1-203ENST00000594504 DHRS11Q6UWP2 260 aa9.73□□□□□ -0.85
UPF1-203ENST00000594504 LYSMD2Q8IV50 215 aa9.73□□□□□ -0.85
UPF1-203ENST00000594504 OR5M8Q8NGP6 311 aa9.73□□□□□ -0.85
UPF1-203ENST00000594504 OR52I2Q8NH67 350 aa9.73□□□□□ -0.85
UPF1-203ENST00000594504 SECTM1Q8WVN6 248 aa9.73□□□□□ -0.85
UPF1-203ENST00000594504 FCAMRQ8WWV6 532 aa9.73□□□□□ -0.85
UPF1-203ENST00000594504 DDB2Q92466 427 aa9.73□□□□□ -0.85
UPF1-203ENST00000594504 FLYWCH2Q96CP2 140 aaKnown RBP9.73□□□□□ -0.85
UPF1-203ENST00000594504 TSNAXQ99598 290 aaKnown RBP9.73□□□□□ -0.85
UPF1-203ENST00000594504 HSD17B10Q99714 261 aaKnown RBP9.73□□□□□ -0.85
UPF1-203ENST00000594504 GON7Q9BXV9 100 aa9.73□□□□□ -0.85
UPF1-203ENST00000594504 NDUFA13Q9P0J0 144 aa9.73□□□□□ -0.85
UPF1-203ENST00000594504 WSB1Q9Y6I7 421 aa9.73□□□□□ -0.85
UPF1-203ENST00000594504 LINC00473A8K010 186 aa9.72□□□□□ -0.85
UPF1-203ENST00000594504 SEC14L6B5MCN3 397 aa9.72□□□□□ -0.85
UPF1-203ENST00000594504 G3V318 75 aa9.72□□□□□ -0.85
UPF1-203ENST00000594504 GABARAPH6UMI1 98 aa9.72□□□□□ -0.85
UPF1-203ENST00000594504 RRHO14718 337 aa9.72□□□□□ -0.85
UPF1-203ENST00000594504 RAMP3O60896 148 aa9.72□□□□□ -0.85
UPF1-203ENST00000594504 SPDEFO95238 335 aa9.72□□□□□ -0.85
UPF1-203ENST00000594504 IGLV2-14P01704 120 aa9.72□□□□□ -0.85
UPF1-203ENST00000594504 HLA-DRB1P01911 266 aa9.72□□□□□ -0.85
UPF1-203ENST00000594504 VDAC1P21796 283 aa9.72□□□□□ -0.85
UPF1-203ENST00000594504 FXYD4P59646 89 aa9.72□□□□□ -0.85
UPF1-203ENST00000594504 RPS16P62249 146 aaKnown RBP9.72□□□□□ -0.85
UPF1-203ENST00000594504 IL18Q14116 193 aa9.72□□□□□ -0.85
UPF1-203ENST00000594504 RNASE12Q5GAN4 147 aaKnown RBP9.72□□□□□ -0.85
UPF1-203ENST00000594504 C9orf66Q5T8R8 295 aa9.72□□□□□ -0.85
UPF1-203ENST00000594504 ZNF660Q6AZW8 331 aaPredicted RBP9.72□□□□□ -0.85
UPF1-203ENST00000594504 PYHIN1Q6K0P9 492 aa9.72□□□□□ -0.85
UPF1-203ENST00000594504 LIN54Q6MZP7 749 aa9.72□□□□□ -0.85
UPF1-203ENST00000594504 KCTD9Q7L273 389 aa9.72□□□□□ -0.85
UPF1-203ENST00000594504 RNF152Q8N8N0 203 aa9.72□□□□□ -0.85
UPF1-203ENST00000594504 ZBTB34Q8NCN2 500 aa9.72□□□□□ -0.85
UPF1-203ENST00000594504 BVESQ8NE79 360 aa9.72□□□□□ -0.85
UPF1-203ENST00000594504 OR11H1Q8NG94 326 aa9.72□□□□□ -0.85
UPF1-203ENST00000594504 BORCS5Q969J3 196 aa9.72□□□□□ -0.85
UPF1-203ENST00000594504 OR5B12Q96R08 314 aa9.72□□□□□ -0.85
UPF1-203ENST00000594504 ZNF2Q9BSG1 426 aaPredicted RBP9.72□□□□□ -0.85
UPF1-203ENST00000594504 SLC5A7Q9GZV3 580 aa9.72□□□□□ -0.85
UPF1-203ENST00000594504 KLK15Q9H2R5 256 aa9.72□□□□□ -0.85
UPF1-203ENST00000594504 KLK11Q9UBX7 282 aa9.72□□□□□ -0.85
UPF1-203ENST00000594504 MTFP1Q9UDX5 166 aa9.72□□□□□ -0.85
UPF1-203ENST00000594504 ZNF107Q9UII5 783 aaPredicted RBP9.72□□□□□ -0.85
UPF1-203ENST00000594504 PRELID3BQ9Y3B1 194 aa9.72□□□□□ -0.85
UPF1-203ENST00000594504 A3GALT2U3KPV4 340 aa9.72□□□□□ -0.85
UPF1-203ENST00000594504 U3KQK5 164 aa9.72□□□□□ -0.85
UPF1-203ENST00000594504 CTDSPLO15194 276 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms