RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 FFAR4Q5NUL3 377 aa13.8□□□□□ -0.2
LIG1-206ENST00000594067 C11orf53Q8IXP5 236 aa13.8□□□□□ -0.2
LIG1-206ENST00000594067 ZBTB34Q8NCN2 500 aa13.8□□□□□ -0.2
LIG1-206ENST00000594067 OR4F5Q8NH21 305 aa13.8□□□□□ -0.2
LIG1-206ENST00000594067 DTD1Q8TEA8 209 aa13.8□□□□□ -0.2
LIG1-206ENST00000594067 OR4F4Q96R69 305 aa13.8□□□□□ -0.2
LIG1-206ENST00000594067 HES4Q9HCC6 221 aa13.8□□□□□ -0.2
LIG1-206ENST00000594067 CTXND1A0A1B0GTU2 59 aa13.79□□□□□ -0.2
LIG1-206ENST00000594067 OOEPA6NGQ2 149 aa13.79□□□□□ -0.2
LIG1-206ENST00000594067 PMS2P5A8MQ11 134 aa13.79□□□□□ -0.2
LIG1-206ENST00000594067 GGCTO75223 188 aaKnown RBP13.79□□□□□ -0.2
LIG1-206ENST00000594067 DEFA4P12838 97 aa13.79□□□□□ -0.2
LIG1-206ENST00000594067 CD59P13987 128 aa13.79□□□□□ -0.2
LIG1-206ENST00000594067 GNB2P62879 340 aa13.79□□□□□ -0.2
LIG1-206ENST00000594067 TGFBR3Q03167 851 aa13.79□□□□□ -0.2
LIG1-206ENST00000594067 CATR1Q13166 79 aa13.79□□□□□ -0.2
LIG1-206ENST00000594067 PRAMEF6Q5VXH4 476 aa13.79□□□□□ -0.2
LIG1-206ENST00000594067 RFESDQ8TAC1 157 aa13.79□□□□□ -0.2
LIG1-206ENST00000594067 ANAPC16Q96DE5 110 aa13.79□□□□□ -0.2
LIG1-206ENST00000594067 GMPPAQ96IJ6 420 aaPredicted RBP13.79□□□□□ -0.2
LIG1-206ENST00000594067 NEU1Q99519 415 aa13.79□□□□□ -0.2
LIG1-206ENST00000594067 METRNQ9UJH8 293 aa13.79□□□□□ -0.2
LIG1-206ENST00000594067 FZR1Q9UM11 496 aa13.79□□□□□ -0.2
LIG1-206ENST00000594067 TMEM210A6NLX4 147 aa13.79□□□□□ -0.2
LIG1-206ENST00000594067 SLC35E4Q6ICL7 350 aa13.79□□□□□ -0.2
LIG1-206ENST00000594067 OR10P1Q8NGE3 313 aa13.79□□□□□ -0.2
LIG1-206ENST00000594067 OR2T10Q8NGZ9 312 aa13.79□□□□□ -0.2
LIG1-206ENST00000594067 OR6C3Q9NZP0 311 aa13.79□□□□□ -0.2
LIG1-206ENST00000594067 DEFB108AA8MXU0 73 aa13.78□□□□□ -0.2
LIG1-206ENST00000594067 SSTR5P35346 364 aa13.78□□□□□ -0.2
LIG1-206ENST00000594067 ATP6V1FQ16864 119 aa13.78□□□□□ -0.2
LIG1-206ENST00000594067 TECTAO75443 2155 aa13.78□□□□□ -0.2
LIG1-206ENST00000594067 NCOR1O75376 2440 aa13.78□□□□□ -0.2
LIG1-206ENST00000594067 GYPAP02724 150 aa13.78□□□□□ -0.2
LIG1-206ENST00000594067 TYMSP04818 313 aa13.78□□□□□ -0.2
LIG1-206ENST00000594067 H2BFWTQ7Z2G1 175 aa13.78□□□□□ -0.2
LIG1-206ENST00000594067 TMEM18Q96B42 140 aa13.78□□□□□ -0.2
LIG1-206ENST00000594067 CACNA1DQ01668 2161 aa13.78□□□□□ -0.2
LIG1-206ENST00000594067 LINC00473A8K010 186 aa13.77□□□□□ -0.2
LIG1-206ENST00000594067 GALR2O43603 387 aaPredicted RBP13.77□□□□□ -0.2
LIG1-206ENST00000594067 USF3Q68DE3 2245 aa13.77□□□□□ -0.2
LIG1-206ENST00000594067 EREGO14944 169 aa13.77□□□□□ -0.21
LIG1-206ENST00000594067 TCAPO15273 167 aa13.77□□□□□ -0.21
LIG1-206ENST00000594067 OR4A8P0C604 315 aa13.77□□□□□ -0.21
LIG1-206ENST00000594067 NPPCP23582 126 aa13.77□□□□□ -0.21
LIG1-206ENST00000594067 NUTF2P61970 127 aaKnown RBP13.77□□□□□ -0.21
LIG1-206ENST00000594067 LTC4SQ16873 150 aa13.77□□□□□ -0.21
LIG1-206ENST00000594067 ACOT6Q3I5F7 207 aaPredicted RBP13.77□□□□□ -0.21
LIG1-206ENST00000594067 ACP7Q6ZNF0 438 aa13.77□□□□□ -0.21
LIG1-206ENST00000594067 CISD2Q8N5K1 135 aaKnown RBP13.77□□□□□ -0.21
LIG1-206ENST00000594067 OR13A1Q8NGR1 328 aa13.77□□□□□ -0.21
LIG1-206ENST00000594067 NPCDR1Q9BY65 106 aa13.77□□□□□ -0.21
LIG1-206ENST00000594067 MANBALQ9NQG1 85 aa13.77□□□□□ -0.21
LIG1-206ENST00000594067 WASF3Q9UPY6 502 aa13.77□□□□□ -0.21
LIG1-206ENST00000594067 DOCK11Q5JSL3 2073 aa13.77□□□□□ -0.21
LIG1-206ENST00000594067 PAGE4O60829 102 aa13.77□□□□□ -0.21
LIG1-206ENST00000594067 WISP2O76076 250 aa13.77□□□□□ -0.21
LIG1-206ENST00000594067 CLDN14O95500 239 aa13.77□□□□□ -0.21
LIG1-206ENST00000594067 CNEP1R1Q8N9A8 125 aa13.77□□□□□ -0.21
LIG1-206ENST00000594067 TRIB1Q96RU8 372 aa13.77□□□□□ -0.21
LIG1-206ENST00000594067 DCTN5Q9BTE1 182 aa13.77□□□□□ -0.21
LIG1-206ENST00000594067 ZDHHC11Q9H8X9 412 aa13.77□□□□□ -0.21
LIG1-206ENST00000594067 PSG11Q9UQ72 335 aa13.77□□□□□ -0.21
LIG1-206ENST00000594067 RAB29O14966 203 aa13.76□□□□□ -0.21
LIG1-206ENST00000594067 COX5AP20674 150 aa13.76□□□□□ -0.21
LIG1-206ENST00000594067 SRP14P37108 136 aaKnown RBP13.76□□□□□ -0.21
LIG1-206ENST00000594067 PAX5Q02548 391 aa13.76□□□□□ -0.21
LIG1-206ENST00000594067 PLPPR2Q96GM1 343 aa13.76□□□□□ -0.21
LIG1-206ENST00000594067 MRPL37Q9BZE1 423 aaKnown RBP13.76□□□□□ -0.21
LIG1-206ENST00000594067 MSL2Q9HCI7 577 aa13.76□□□□□ -0.21
LIG1-206ENST00000594067 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.76□□□□□ -0.21
LIG1-206ENST00000594067 C1QTNF9BB2RNN3 333 aa13.76□□□□□ -0.21
LIG1-206ENST00000594067 MBP02144 154 aa13.76□□□□□ -0.21
LIG1-206ENST00000594067 HES3Q5TGS1 186 aa13.76□□□□□ -0.21
LIG1-206ENST00000594067 INO80CQ6PI98 192 aaPredicted RBP13.76□□□□□ -0.21
LIG1-206ENST00000594067 WDR82Q6UXN9 313 aa13.76□□□□□ -0.21
LIG1-206ENST00000594067 MRPL41Q8IXM3 137 aaKnown RBP13.76□□□□□ -0.21
LIG1-206ENST00000594067 ZNF709Q8N972 641 aa13.76□□□□□ -0.21
LIG1-206ENST00000594067 CXXC4Q9H2H0 198 aa13.76□□□□□ -0.21
LIG1-206ENST00000594067 PRRC2CQ9Y520 2896 aaKnown RBP13.75□□□□□ -0.21
LIG1-206ENST00000594067 VENTXO95231 258 aa13.75□□□□□ -0.21
LIG1-206ENST00000594067 FABP6P51161 128 aa13.75□□□□□ -0.21
LIG1-206ENST00000594067 NEIL1Q96FI4 390 aaPredicted RBP13.75□□□□□ -0.21
LIG1-206ENST00000594067 IFNL4K9M1U5 179 aa13.75□□□□□ -0.21
LIG1-206ENST00000594067 CDX4O14627 284 aaPredicted RBP13.75□□□□□ -0.21
LIG1-206ENST00000594067 TIMM8AO60220 97 aaPredicted RBP13.75□□□□□ -0.21
LIG1-206ENST00000594067 CCKARP32238 428 aa13.75□□□□□ -0.21
LIG1-206ENST00000594067 CNN1P51911 297 aaKnown RBP13.75□□□□□ -0.21
LIG1-206ENST00000594067 FAM214BQ7L5A3 538 aa13.75□□□□□ -0.21
LIG1-206ENST00000594067 GBGT1Q8N5D6 347 aa13.75□□□□□ -0.21
LIG1-206ENST00000594067 TMEM178AQ8NBL3 297 aa13.75□□□□□ -0.21
LIG1-206ENST00000594067 OR5T1Q8NG75 326 aa13.75□□□□□ -0.21
LIG1-206ENST00000594067 TAAR6Q96RI8 345 aa13.75□□□□□ -0.21
LIG1-206ENST00000594067 QTRT1Q9BXR0 403 aaKnown RBP13.75□□□□□ -0.21
LIG1-206ENST00000594067 BMP5P22003 454 aa13.74□□□□□ -0.21
LIG1-206ENST00000594067 RAB4BP61018 213 aa13.74□□□□□ -0.21
LIG1-206ENST00000594067 IQCJQ1A5X6 159 aa13.74□□□□□ -0.21
LIG1-206ENST00000594067 Q6ZT83 130 aa13.74□□□□□ -0.21
LIG1-206ENST00000594067 WFIKKN1Q96NZ8 548 aa13.74□□□□□ -0.21
LIG1-206ENST00000594067 CIB3Q96Q77 187 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms