RNA–Protein interactions for RNA: ENST00000593504.5

SYMPK-202, Transcript of symplekin, humanhuman

TSL 2

Gene SYMPK, Length 5,107 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-202ENST00000593504 RIF1Q5UIP0 2472 aaKnown RBP12.89□□□□□ -0.35
SYMPK-202ENST00000593504 RTTNQ86VV8 2226 aa12.89□□□□□ -0.35
SYMPK-202ENST00000593504 IGKV1D-8A0A087WSZ0 117 aa12.89□□□□□ -0.35
SYMPK-202ENST00000593504 FBP1P09467 338 aa12.89□□□□□ -0.35
SYMPK-202ENST00000593504 FAM87AP0C7U9 286 aa12.89□□□□□ -0.35
SYMPK-202ENST00000593504 MPZP25189 248 aa12.89□□□□□ -0.35
SYMPK-202ENST00000593504 MDS2Q8NDY4 140 aa12.89□□□□□ -0.35
SYMPK-202ENST00000593504 OR4F17Q8NGA8 305 aa12.89□□□□□ -0.35
SYMPK-202ENST00000593504 COL4A4P53420 1690 aaPredicted RBP12.89□□□□□ -0.35
SYMPK-202ENST00000593504 PROB1E7EW31 1015 aa12.88□□□□□ -0.35
SYMPK-202ENST00000593504 SRSF10O75494 262 aaKnown RBP12.88□□□□□ -0.35
SYMPK-202ENST00000593504 RPLP1P05386 114 aaKnown RBP12.88□□□□□ -0.35
SYMPK-202ENST00000593504 RND3P61587 244 aa12.88□□□□□ -0.35
SYMPK-202ENST00000593504 KHDC3LQ587J8 217 aa12.88□□□□□ -0.35
SYMPK-202ENST00000593504 RNF144BQ7Z419 303 aa12.88□□□□□ -0.35
SYMPK-202ENST00000593504 NOL4LQ96MY1 436 aaPredicted RBP12.88□□□□□ -0.35
SYMPK-202ENST00000593504 NDFIP1Q9BT67 221 aa12.88□□□□□ -0.35
SYMPK-202ENST00000593504 TMEM140Q9NV12 185 aa12.88□□□□□ -0.35
SYMPK-202ENST00000593504 THYN1Q9P016 225 aa12.88□□□□□ -0.35
SYMPK-202ENST00000593504 KCNMB2Q9Y691 235 aa12.88□□□□□ -0.35
SYMPK-202ENST00000593504 OBSL1O75147 1896 aa12.88□□□□□ -0.35
SYMPK-202ENST00000593504 WNT5AP41221 380 aa12.88□□□□□ -0.35
SYMPK-202ENST00000593504 OR4C12Q96R67 309 aa12.88□□□□□ -0.35
SYMPK-202ENST00000593504 SCNM1Q9BWG6 230 aa12.88□□□□□ -0.35
SYMPK-202ENST00000593504 OR51M1Q9H341 326 aa12.88□□□□□ -0.35
SYMPK-202ENST00000593504 RNF222A6NCQ9 220 aa12.88□□□□□ -0.35
SYMPK-202ENST00000593504 ZG16O60844 167 aa12.88□□□□□ -0.35
SYMPK-202ENST00000593504 PGA5P0DJD9 388 aa12.88□□□□□ -0.35
SYMPK-202ENST00000593504 ETV2O00321 342 aaPredicted RBP12.88□□□□□ -0.35
SYMPK-202ENST00000593504 GPR6P46095 362 aaPredicted RBP12.88□□□□□ -0.35
SYMPK-202ENST00000593504 ID4P47928 161 aa12.88□□□□□ -0.35
SYMPK-202ENST00000593504 PLPPR1Q8TBJ4 325 aa12.88□□□□□ -0.35
SYMPK-202ENST00000593504 PACRGQ96M98 296 aaPredicted RBP12.88□□□□□ -0.35
SYMPK-202ENST00000593504 MS4A10Q96PG2 267 aa12.88□□□□□ -0.35
SYMPK-202ENST00000593504 IGKV1-27A0A075B6S5 117 aa12.87□□□□□ -0.35
SYMPK-202ENST00000593504 ZNF729A6NN14 1252 aaPredicted RBP12.87□□□□□ -0.35
SYMPK-202ENST00000593504 UCP1P25874 307 aa12.87□□□□□ -0.35
SYMPK-202ENST00000593504 FAM201AQ5SY85 155 aa12.87□□□□□ -0.35
SYMPK-202ENST00000593504 TMEM37Q8WXS4 190 aa12.87□□□□□ -0.35
SYMPK-202ENST00000593504 TAF15Q92804 592 aaKnown RBP eCLIP12.87□□□□□ -0.35
SYMPK-202ENST00000593504 NPVFQ9HCQ7 196 aa12.87□□□□□ -0.35
SYMPK-202ENST00000593504 TRAPPC1Q9Y5R8 145 aa12.87□□□□□ -0.35
SYMPK-202ENST00000593504 IGHV3-72A0A0B4J1Y9 119 aa12.87□□□□□ -0.35
SYMPK-202ENST00000593504 KHDC1LQ5JSQ8 128 aa12.87□□□□□ -0.35
SYMPK-202ENST00000593504 C19orf35Q6ZS72 473 aa12.87□□□□□ -0.35
SYMPK-202ENST00000593504 BET1LQ9NYM9 111 aa12.87□□□□□ -0.35
SYMPK-202ENST00000593504 NDUFA2O43678 99 aa12.87□□□□□ -0.35
SYMPK-202ENST00000593504 BCL2P10415 239 aa12.87□□□□□ -0.35
SYMPK-202ENST00000593504 OR13A1Q8NGR1 328 aa12.87□□□□□ -0.35
SYMPK-202ENST00000593504 AAMDCQ9H7C9 122 aa12.87□□□□□ -0.35
SYMPK-202ENST00000593504 ARL2-SNX15V9GYD0 113 aa12.87□□□□□ -0.35
SYMPK-202ENST00000593504 DNAJC13O75165 2243 aa12.87□□□□□ -0.35
SYMPK-202ENST00000593504 BRS3P32247 399 aa12.87□□□□□ -0.35
SYMPK-202ENST00000593504 MMDQ15546 238 aa12.87□□□□□ -0.35
SYMPK-202ENST00000593504 ZDHHC16Q969W1 377 aa12.87□□□□□ -0.35
SYMPK-202ENST00000593504 ZNF785A8K8V0 405 aa12.86□□□□□ -0.35
SYMPK-202ENST00000593504 SMIM8Q96KF7 97 aa12.86□□□□□ -0.35
SYMPK-202ENST00000593504 SMDT1Q9H4I9 107 aa12.86□□□□□ -0.35
SYMPK-202ENST00000593504 LRRK1Q38SD2 2015 aa12.86□□□□□ -0.35
SYMPK-202ENST00000593504 CXorf1O96002 111 aa12.86□□□□□ -0.35
SYMPK-202ENST00000593504 ERVFRD-1P60508 538 aa12.86□□□□□ -0.35
SYMPK-202ENST00000593504 KLRB1Q12918 225 aa12.86□□□□□ -0.35
SYMPK-202ENST00000593504 CYB561D1Q8N8Q1 229 aa12.86□□□□□ -0.35
SYMPK-202ENST00000593504 LINC01560Q8TB33 94 aa12.86□□□□□ -0.35
SYMPK-202ENST00000593504 B4DEV8 164 aa12.86□□□□□ -0.35
SYMPK-202ENST00000593504 FOXF2Q12947 444 aa12.86□□□□□ -0.35
SYMPK-202ENST00000593504 PMS2P11Q13670 270 aa12.86□□□□□ -0.35
SYMPK-202ENST00000593504 VKORC1L1Q8N0U8 176 aa12.86□□□□□ -0.35
SYMPK-202ENST00000593504 PUSL1Q8N0Z8 303 aaKnown RBP12.86□□□□□ -0.35
SYMPK-202ENST00000593504 OR4X1Q8NH49 305 aa12.86□□□□□ -0.35
SYMPK-202ENST00000593504 BARX1Q9HBU1 254 aaPredicted RBP12.86□□□□□ -0.35
SYMPK-202ENST00000593504 IGSF23A1L1A6 192 aa12.86□□□□□ -0.35
SYMPK-202ENST00000593504 DCTN5Q9BTE1 182 aa12.86□□□□□ -0.35
SYMPK-202ENST00000593504 ASCL3Q9NQ33 180 aa12.86□□□□□ -0.35
SYMPK-202ENST00000593504 RNF24Q9Y225 148 aa12.86□□□□□ -0.35
SYMPK-202ENST00000593504 LOC105371267A0A1B0GV96 52 aa12.85□□□□□ -0.35
SYMPK-202ENST00000593504 H0Y8G0 127 aa12.85□□□□□ -0.35
SYMPK-202ENST00000593504 DANCRP0C864 163 aa12.85□□□□□ -0.35
SYMPK-202ENST00000593504 ARL16Q0P5N6 197 aa12.85□□□□□ -0.35
SYMPK-202ENST00000593504 SRSF6Q13247 344 aaKnown RBP12.85□□□□□ -0.35
SYMPK-202ENST00000593504 DOLPP1Q86YN1 238 aa12.85□□□□□ -0.35
SYMPK-202ENST00000593504 PXMP4Q9Y6I8 212 aa12.85□□□□□ -0.35
SYMPK-202ENST00000593504 MC5RP33032 325 aa12.85□□□□□ -0.35
SYMPK-202ENST00000593504 FHITP49789 147 aa12.85□□□□□ -0.35
SYMPK-202ENST00000593504 APC2O95996 2303 aa12.85□□□□□ -0.35
SYMPK-202ENST00000593504 TRAV24A0A0B4J272 114 aa12.85□□□□□ -0.35
SYMPK-202ENST00000593504 IGHV1-69-2A0A0G2JMI3 117 aa12.85□□□□□ -0.35
SYMPK-202ENST00000593504 SPINK4O60575 86 aa12.85□□□□□ -0.35
SYMPK-202ENST00000593504 RPL39P5Q59GN2 51 aa12.85□□□□□ -0.35
SYMPK-202ENST00000593504 FOXL2NBQ6ZUU3 175 aa12.85□□□□□ -0.35
SYMPK-202ENST00000593504 PDPNQ86YL7 162 aa12.85□□□□□ -0.35
SYMPK-202ENST00000593504 WASHC3Q9Y3C0 194 aa12.85□□□□□ -0.35
SYMPK-202ENST00000593504 YTHDF2Q9Y5A9 579 aaKnown RBP12.85□□□□□ -0.35
SYMPK-202ENST00000593504 IGKV1D-13A0A0B4J2D9 117 aa12.85□□□□□ -0.35
SYMPK-202ENST00000593504 PDE6DO43924 150 aa12.85□□□□□ -0.35
SYMPK-202ENST00000593504 IGKV1-13P0DP09 117 aa12.85□□□□□ -0.35
SYMPK-202ENST00000593504 BSPH1Q075Z2 132 aa12.85□□□□□ -0.35
SYMPK-202ENST00000593504 PEAR1Q5VY43 1037 aaPredicted RBP12.85□□□□□ -0.35
SYMPK-202ENST00000593504 TRBV6-7A0A0A0MS04 114 aa12.84□□□□□ -0.35
SYMPK-202ENST00000593504 C10orf113Q5VZT2 155 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms