RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 DUTP33316 252 aaKnown RBP10.75□□□□□ -0.69
APOC1-208ENST00000592535 LGALS7P47929 136 aa10.75□□□□□ -0.69
APOC1-208ENST00000592535 PITPNAQ00169 270 aa10.75□□□□□ -0.69
APOC1-208ENST00000592535 TAGLNQ01995 201 aaKnown RBP10.75□□□□□ -0.69
APOC1-208ENST00000592535 PJVKQ0ZLH3 352 aa10.75□□□□□ -0.69
APOC1-208ENST00000592535 RTL8BQ17RB0 113 aa10.75□□□□□ -0.69
APOC1-208ENST00000592535 PYHIN1Q6K0P9 492 aa10.75□□□□□ -0.69
APOC1-208ENST00000592535 DDB2Q92466 427 aa10.75□□□□□ -0.69
APOC1-208ENST00000592535 MS4A10Q96PG2 267 aa10.75□□□□□ -0.69
APOC1-208ENST00000592535 ETV7Q9Y603 341 aa10.75□□□□□ -0.69
APOC1-208ENST00000592535 A6NHS1 94 aa10.74□□□□□ -0.69
APOC1-208ENST00000592535 IGHV3-11P01762 117 aa10.74□□□□□ -0.69
APOC1-208ENST00000592535 LGALS1P09382 135 aaKnown RBP10.74□□□□□ -0.69
APOC1-208ENST00000592535 CTXN2P0C2S0 81 aa10.74□□□□□ -0.69
APOC1-208ENST00000592535 RRASP10301 218 aa10.74□□□□□ -0.69
APOC1-208ENST00000592535 TGFBR1P36897 503 aa10.74□□□□□ -0.69
APOC1-208ENST00000592535 SCAND1P57086 179 aa10.74□□□□□ -0.69
APOC1-208ENST00000592535 TPPP2P59282 170 aa10.74□□□□□ -0.69
APOC1-208ENST00000592535 CBX3Q13185 183 aa10.74□□□□□ -0.69
APOC1-208ENST00000592535 CNIH2Q6PI25 160 aa10.74□□□□□ -0.69
APOC1-208ENST00000592535 OR13F1Q8NGS4 319 aa10.74□□□□□ -0.69
APOC1-208ENST00000592535 DCUN1D4Q92564 292 aa10.74□□□□□ -0.69
APOC1-208ENST00000592535 ADTRPQ96IZ2 230 aa10.74□□□□□ -0.69
APOC1-208ENST00000592535 OR2W1Q9Y3N9 320 aa10.74□□□□□ -0.69
APOC1-208ENST00000592535 TNCP24821 2201 aa10.73□□□□□ -0.69
APOC1-208ENST00000592535 TRAV18A0A075B6X5 111 aa10.73□□□□□ -0.69
APOC1-208ENST00000592535 IGHV4OR15-8A0A075B7B6 117 aa10.73□□□□□ -0.69
APOC1-208ENST00000592535 A0A087WW49 117 aa10.73□□□□□ -0.69
APOC1-208ENST00000592535 IGKV1D-13A0A0B4J2D9 117 aa10.73□□□□□ -0.69
APOC1-208ENST00000592535 RAMP3O60896 148 aa10.73□□□□□ -0.69
APOC1-208ENST00000592535 CNIH1O95406 144 aa10.73□□□□□ -0.69
APOC1-208ENST00000592535 CRYZL1O95825 349 aa10.73□□□□□ -0.69
APOC1-208ENST00000592535 HLA-DQB1P01920 261 aa10.73□□□□□ -0.69
APOC1-208ENST00000592535 IGKV1-13P0DP09 117 aa10.73□□□□□ -0.69
APOC1-208ENST00000592535 SLURP1P55000 103 aa10.73□□□□□ -0.69
APOC1-208ENST00000592535 MRGPRG-AS1Q2M3A8 158 aa10.73□□□□□ -0.69
APOC1-208ENST00000592535 ZNF645Q8N7E2 425 aa10.73□□□□□ -0.69
APOC1-208ENST00000592535 PRR25Q96S07 402 aa10.73□□□□□ -0.69
APOC1-208ENST00000592535 VCX3AQ9NNX9 186 aa10.73□□□□□ -0.69
APOC1-208ENST00000592535 ZMAT5Q9UDW3 170 aaKnown RBP10.73□□□□□ -0.69
APOC1-208ENST00000592535 ANXA10Q9UJ72 324 aa10.73□□□□□ -0.69
APOC1-208ENST00000592535 LINC01619G3V211 115 aa10.72□□□□□ -0.69
APOC1-208ENST00000592535 OVOL1O14753 267 aa10.72□□□□□ -0.69
APOC1-208ENST00000592535 IGLV2-14P01704 120 aa10.72□□□□□ -0.69
APOC1-208ENST00000592535 TRGV3P03979 118 aa10.72□□□□□ -0.69
APOC1-208ENST00000592535 CD40LGP29965 261 aa10.72□□□□□ -0.69
APOC1-208ENST00000592535 ECI1P42126 302 aa10.72□□□□□ -0.69
APOC1-208ENST00000592535 VMA21Q3ZAQ7 101 aa10.72□□□□□ -0.69
APOC1-208ENST00000592535 TIMM50Q3ZCQ8 353 aa10.72□□□□□ -0.69
APOC1-208ENST00000592535 GVQW1Q8N7I0 195 aa10.72□□□□□ -0.69
APOC1-208ENST00000592535 POC5Q8NA72 575 aa10.72□□□□□ -0.69
APOC1-208ENST00000592535 OR5T1Q8NG75 326 aa10.72□□□□□ -0.69
APOC1-208ENST00000592535 DLX4Q92988 240 aaPredicted RBP10.72□□□□□ -0.69
APOC1-208ENST00000592535 YIPF6Q96EC8 236 aa10.72□□□□□ -0.69
APOC1-208ENST00000592535 RHOVQ96L33 236 aa10.72□□□□□ -0.69
APOC1-208ENST00000592535 SLA2Q9H6Q3 261 aa10.72□□□□□ -0.69
APOC1-208ENST00000592535 BATF3Q9NR55 127 aa10.72□□□□□ -0.69
APOC1-208ENST00000592535 ZNF355PQ9NSJ1 428 aa10.72□□□□□ -0.69
APOC1-208ENST00000592535 RBMX2Q9Y388 322 aaKnown RBP10.72□□□□□ -0.69
APOC1-208ENST00000592535 DPPA5A6NC42 116 aa10.71□□□□□ -0.69
APOC1-208ENST00000592535 AIREO43918 545 aa10.71□□□□□ -0.69
APOC1-208ENST00000592535 FCGR3BO75015 233 aa10.71□□□□□ -0.69
APOC1-208ENST00000592535 TUSC2O75896 110 aa10.71□□□□□ -0.69
APOC1-208ENST00000592535 PTHLHP12272 177 aa10.71□□□□□ -0.69
APOC1-208ENST00000592535 UBE2KP61086 200 aa10.71□□□□□ -0.69
APOC1-208ENST00000592535 LSM3P62310 102 aaKnown RBP10.71□□□□□ -0.69
APOC1-208ENST00000592535 RPL30P62888 115 aaKnown RBP10.71□□□□□ -0.69
APOC1-208ENST00000592535 IDO2Q6ZQW0 420 aa10.71□□□□□ -0.69
APOC1-208ENST00000592535 KCTD9Q7L273 389 aa10.71□□□□□ -0.69
APOC1-208ENST00000592535 TEX45Q8NA69 505 aa10.71□□□□□ -0.69
APOC1-208ENST00000592535 BEST4Q8NFU0 473 aa10.71□□□□□ -0.69
APOC1-208ENST00000592535 OSR1Q8TAX0 266 aaPredicted RBP10.71□□□□□ -0.69
APOC1-208ENST00000592535 AUNIPQ9H7T9 357 aa10.71□□□□□ -0.69
APOC1-208ENST00000592535 SPATA2Q9UM82 520 aa10.71□□□□□ -0.69
APOC1-208ENST00000592535 A0A0A6YYH2 397 aa10.7□□□□□ -0.7
APOC1-208ENST00000592535 A6NJ64 397 aa10.7□□□□□ -0.7
APOC1-208ENST00000592535 H3BUA1 57 aa10.7□□□□□ -0.7
APOC1-208ENST00000592535 HSPB1P04792 205 aaKnown RBP10.7□□□□□ -0.7
APOC1-208ENST00000592535 FCER2P06734 321 aa10.7□□□□□ -0.7
APOC1-208ENST00000592535 APELAP0DMC3 54 aa10.7□□□□□ -0.7
APOC1-208ENST00000592535 ARPC4P59998 168 aa10.7□□□□□ -0.7
APOC1-208ENST00000592535 TNXAQ16473 311 aa10.7□□□□□ -0.7
APOC1-208ENST00000592535 PRSS8Q16651 343 aa10.7□□□□□ -0.7
APOC1-208ENST00000592535 OR2B11Q5JQS5 317 aa10.7□□□□□ -0.7
APOC1-208ENST00000592535 C11orf87Q6NUJ2 197 aa10.7□□□□□ -0.7
APOC1-208ENST00000592535 HOGA1Q86XE5 327 aa10.7□□□□□ -0.7
APOC1-208ENST00000592535 B9D2Q9BPU9 175 aa10.7□□□□□ -0.7
APOC1-208ENST00000592535 RBM38Q9H0Z9 239 aaKnown RBP10.7□□□□□ -0.7
APOC1-208ENST00000592535 DIABLOQ9NR28 239 aa10.7□□□□□ -0.7
APOC1-208ENST00000592535 SORL1Q92673 2214 aa10.69□□□□□ -0.7
APOC1-208ENST00000592535 TMEM127O75204 238 aa10.69□□□□□ -0.7
APOC1-208ENST00000592535 SLC22A5O76082 557 aa10.69□□□□□ -0.7
APOC1-208ENST00000592535 SAA1P0DJI8 122 aaPredicted RBP10.69□□□□□ -0.7
APOC1-208ENST00000592535 RPS19P39019 145 aaKnown RBP10.69□□□□□ -0.7
APOC1-208ENST00000592535 INSL3P51460 131 aa10.69□□□□□ -0.7
APOC1-208ENST00000592535 DEFA5Q01523 94 aa10.69□□□□□ -0.7
APOC1-208ENST00000592535 CD69Q07108 199 aa10.69□□□□□ -0.7
APOC1-208ENST00000592535 EIF4EBP1Q13541 118 aaPredicted RBP10.69□□□□□ -0.7
APOC1-208ENST00000592535 DCTN2Q13561 401 aaKnown RBP10.69□□□□□ -0.7
APOC1-208ENST00000592535 OVCH2Q7RTZ1 564 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms