RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 FAM216BQ8N7L0 139 aa13.01□□□□□ -0.33
MBD1-227ENST00000592060 ZNF439Q8NDP4 499 aa13.01□□□□□ -0.33
MBD1-227ENST00000592060 DEFB108BQ8NET1 73 aa13.01□□□□□ -0.33
MBD1-227ENST00000592060 CCL13Q99616 98 aa13.01□□□□□ -0.33
MBD1-227ENST00000592060 TMEM147Q9BVK8 224 aa13.01□□□□□ -0.33
MBD1-227ENST00000592060 LINC00574Q9H8X3 128 aa13.01□□□□□ -0.33
MBD1-227ENST00000592060 EPG5Q9HCE0 2579 aa13□□□□□ -0.33
MBD1-227ENST00000592060 TRGV10A0A0A0MS01 117 aa13□□□□□ -0.33
MBD1-227ENST00000592060 C7orf77A4D0Y5 90 aa13□□□□□ -0.33
MBD1-227ENST00000592060 COLCA2A8K830 154 aa13□□□□□ -0.33
MBD1-227ENST00000592060 C17orf100A8MU93 164 aa13□□□□□ -0.33
MBD1-227ENST00000592060 H7C2Y5 167 aa13□□□□□ -0.33
MBD1-227ENST00000592060 OR4A8P0C604 315 aa13□□□□□ -0.33
MBD1-227ENST00000592060 AKR1C3P42330 323 aa13□□□□□ -0.33
MBD1-227ENST00000592060 RAB2AP61019 212 aa13□□□□□ -0.33
MBD1-227ENST00000592060 FLI1Q01543 452 aaPredicted RBP13□□□□□ -0.33
MBD1-227ENST00000592060 AKIRIN2Q53H80 203 aa13□□□□□ -0.33
MBD1-227ENST00000592060 TMEM41BQ5BJD5 291 aa13□□□□□ -0.33
MBD1-227ENST00000592060 CT45A1Q5HYN5 189 aa13□□□□□ -0.33
MBD1-227ENST00000592060 SSX8Q7RTT4 187 aa13□□□□□ -0.33
MBD1-227ENST00000592060 CT45A3Q8NHU0 189 aa13□□□□□ -0.33
MBD1-227ENST00000592060 LEAP2Q969E1 77 aa13□□□□□ -0.33
MBD1-227ENST00000592060 RCC1LQ96I51 464 aaKnown RBP13□□□□□ -0.33
MBD1-227ENST00000592060 DIRC2Q96SL1 478 aa13□□□□□ -0.33
MBD1-227ENST00000592060 RPS10P5Q9NQ39 176 aa13□□□□□ -0.33
MBD1-227ENST00000592060 LAMA5O15230 3695 aa13□□□□□ -0.33
MBD1-227ENST00000592060 LOC102723971A0A1B0GUV8 181 aa13□□□□□ -0.33
MBD1-227ENST00000592060 HSPB1P04792 205 aaKnown RBP13□□□□□ -0.33
MBD1-227ENST00000592060 SNRNP70P08621 437 aaKnown RBP13□□□□□ -0.33
MBD1-227ENST00000592060 CTRB1P17538 263 aa13□□□□□ -0.33
MBD1-227ENST00000592060 KIR2DS2P43631 304 aa13□□□□□ -0.33
MBD1-227ENST00000592060 OR2B8PP59922 312 aa13□□□□□ -0.33
MBD1-227ENST00000592060 VWC2Q2TAL6 325 aa13□□□□□ -0.33
MBD1-227ENST00000592060 SPINK9Q5DT21 86 aa13□□□□□ -0.33
MBD1-227ENST00000592060 SOHLH1Q5JUK2 328 aa13□□□□□ -0.33
MBD1-227ENST00000592060 CTRB2Q6GPI1 263 aa13□□□□□ -0.33
MBD1-227ENST00000592060 ZNF436-AS1Q8NC38 126 aaPredicted RBP13□□□□□ -0.33
MBD1-227ENST00000592060 RXFP4Q8TDU9 374 aa13□□□□□ -0.33
MBD1-227ENST00000592060 CORO2AQ92828 525 aa13□□□□□ -0.33
MBD1-227ENST00000592060 ACACAQ13085 2346 aa12.99□□□□□ -0.33
MBD1-227ENST00000592060 ZNF729A6NN14 1252 aaPredicted RBP12.99□□□□□ -0.33
MBD1-227ENST00000592060 CEBPZOSA8MTT3 80 aa12.99□□□□□ -0.33
MBD1-227ENST00000592060 IRF2P14316 349 aa12.99□□□□□ -0.33
MBD1-227ENST00000592060 CCL8P80075 99 aa12.99□□□□□ -0.33
MBD1-227ENST00000592060 PINX1Q96BK5 328 aaKnown RBP12.99□□□□□ -0.33
MBD1-227ENST00000592060 CLCC1Q96S66 551 aa12.99□□□□□ -0.33
MBD1-227ENST00000592060 ZNF251Q9BRH9 671 aa12.99□□□□□ -0.33
MBD1-227ENST00000592060 IDI2-AS1Q9NZ38 188 aa12.99□□□□□ -0.33
MBD1-227ENST00000592060 DOCK11Q5JSL3 2073 aa12.98□□□□□ -0.33
MBD1-227ENST00000592060 SAA2-SAA4A0A096LPE2 208 aa12.98□□□□□ -0.33
MBD1-227ENST00000592060 C15orf62A8K5M9 175 aa12.98□□□□□ -0.33
MBD1-227ENST00000592060 M0R036 132 aa12.98□□□□□ -0.33
MBD1-227ENST00000592060 RBMXL2O75526 392 aaKnown RBP12.98□□□□□ -0.33
MBD1-227ENST00000592060 ARG1P05089 322 aa12.98□□□□□ -0.33
MBD1-227ENST00000592060 SAA2P0DJI9 122 aaPredicted RBP12.98□□□□□ -0.33
MBD1-227ENST00000592060 TNFRSF1AP19438 455 aa12.98□□□□□ -0.33
MBD1-227ENST00000592060 RHEBQ15382 184 aa12.98□□□□□ -0.33
MBD1-227ENST00000592060 PDLIM3Q53GG5 364 aaPredicted RBP12.98□□□□□ -0.33
MBD1-227ENST00000592060 KHDC3LQ587J8 217 aa12.98□□□□□ -0.33
MBD1-227ENST00000592060 PRAMEF5Q5TYX0 476 aa12.98□□□□□ -0.33
MBD1-227ENST00000592060 ZNF787Q6DD87 383 aa12.98□□□□□ -0.33
MBD1-227ENST00000592060 C15orf54Q8N8G6 183 aa12.98□□□□□ -0.33
MBD1-227ENST00000592060 S1PR3Q99500 378 aa12.98□□□□□ -0.33
MBD1-227ENST00000592060 C20orf24Q9BUV8 137 aa12.98□□□□□ -0.33
MBD1-227ENST00000592060 PRELID3BQ9Y3B1 194 aa12.98□□□□□ -0.33
MBD1-227ENST00000592060 KMT2BQ9UMN6 2715 aaPredicted RBP12.98□□□□□ -0.33
MBD1-227ENST00000592060 TET2Q6N021 2002 aaPredicted RBP12.98□□□□□ -0.33
MBD1-227ENST00000592060 A0A1W2PPE3 182 aa12.98□□□□□ -0.33
MBD1-227ENST00000592060 MDKP21741 143 aaPredicted RBP12.98□□□□□ -0.33
MBD1-227ENST00000592060 GNB2P62879 340 aa12.98□□□□□ -0.33
MBD1-227ENST00000592060 TMEM30BQ3MIR4 351 aa12.98□□□□□ -0.33
MBD1-227ENST00000592060 ADAM5Q6NVV9 412 aa12.98□□□□□ -0.33
MBD1-227ENST00000592060 OR10P1Q8NGE3 313 aa12.98□□□□□ -0.33
MBD1-227ENST00000592060 EGLN1Q9GZT9 426 aa12.98□□□□□ -0.33
MBD1-227ENST00000592060 IGKV1D-33P01593 117 aa12.97□□□□□ -0.33
MBD1-227ENST00000592060 IGKV1-33P01594 117 aa12.97□□□□□ -0.33
MBD1-227ENST00000592060 FAM87AP0C7U9 286 aa12.97□□□□□ -0.33
MBD1-227ENST00000592060 NQO2P16083 231 aa12.97□□□□□ -0.33
MBD1-227ENST00000592060 ELLP55199 621 aaPredicted RBP12.97□□□□□ -0.33
MBD1-227ENST00000592060 SPCS3P61009 180 aa12.97□□□□□ -0.33
MBD1-227ENST00000592060 RELBQ01201 579 aa12.97□□□□□ -0.33
MBD1-227ENST00000592060 ACSM6Q6P461 480 aa12.97□□□□□ -0.33
MBD1-227ENST00000592060 SSX9Q7RTT3 188 aa12.97□□□□□ -0.33
MBD1-227ENST00000592060 CYB561D1Q8N8Q1 229 aa12.97□□□□□ -0.33
MBD1-227ENST00000592060 OR52E5Q8NH55 327 aa12.97□□□□□ -0.33
MBD1-227ENST00000592060 OR4S2Q8NH73 311 aa12.97□□□□□ -0.33
MBD1-227ENST00000592060 TUBA4BQ9H853 241 aa12.97□□□□□ -0.33
MBD1-227ENST00000592060 UNKLQ9H9P5 680 aaKnown RBP12.97□□□□□ -0.33
MBD1-227ENST00000592060 MSRB2Q9Y3D2 182 aa12.97□□□□□ -0.33
MBD1-227ENST00000592060 ICE1Q9Y2F5 2266 aa12.96□□□□□ -0.33
MBD1-227ENST00000592060 NKX6-3A6NJ46 265 aa12.96□□□□□ -0.33
MBD1-227ENST00000592060 ATXN7O15265 892 aaPredicted RBP12.96□□□□□ -0.33
MBD1-227ENST00000592060 MMP23AO75900 390 aa12.96□□□□□ -0.33
MBD1-227ENST00000592060 FBP1P09467 338 aa12.96□□□□□ -0.33
MBD1-227ENST00000592060 FGF7P21781 194 aa12.96□□□□□ -0.33
MBD1-227ENST00000592060 ERVK-16P61578 105 aa12.96□□□□□ -0.33
MBD1-227ENST00000592060 RPS16P62249 146 aaKnown RBP12.96□□□□□ -0.33
MBD1-227ENST00000592060 TFF3Q07654 80 aa12.96□□□□□ -0.33
MBD1-227ENST00000592060 LCN15Q6UWW0 184 aa12.96□□□□□ -0.33
MBD1-227ENST00000592060 VKORC1L1Q8N0U8 176 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms