RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 HLA-DMAP28067 261 aa9.36□□□□□ -0.91
LIG3-213ENST00000590630 FXYD4P59646 89 aa9.36□□□□□ -0.91
LIG3-213ENST00000590630 MRPS10P82664 201 aaKnown RBP9.36□□□□□ -0.91
LIG3-213ENST00000590630 EIF4EBP1Q13541 118 aaPredicted RBP9.36□□□□□ -0.91
LIG3-213ENST00000590630 NSUN5P1Q3KNT7 163 aa9.36□□□□□ -0.91
LIG3-213ENST00000590630 ACTBL2Q562R1 376 aa9.36□□□□□ -0.91
LIG3-213ENST00000590630 ZNF660Q6AZW8 331 aaPredicted RBP9.36□□□□□ -0.91
LIG3-213ENST00000590630 HIST2H2BDQ6DRA6 164 aa9.36□□□□□ -0.91
LIG3-213ENST00000590630 TEX38Q6PEX7 206 aa9.36□□□□□ -0.91
LIG3-213ENST00000590630 ZNF66Q6ZN08 573 aa9.36□□□□□ -0.91
LIG3-213ENST00000590630 OR4F17Q8NGA8 305 aa9.36□□□□□ -0.91
LIG3-213ENST00000590630 OSR1Q8TAX0 266 aaPredicted RBP9.36□□□□□ -0.91
LIG3-213ENST00000590630 OR4F4Q96R69 305 aa9.36□□□□□ -0.91
LIG3-213ENST00000590630 ABHD1Q96SE0 405 aa9.36□□□□□ -0.91
LIG3-213ENST00000590630 C6orf62Q9GZU0 229 aaPredicted RBP9.36□□□□□ -0.91
LIG3-213ENST00000590630 SLC5A7Q9GZV3 580 aa9.36□□□□□ -0.91
LIG3-213ENST00000590630 RSL24D1Q9UHA3 163 aaKnown RBP9.36□□□□□ -0.91
LIG3-213ENST00000590630 ATP6V0E1O15342 81 aa9.35□□□□□ -0.91
LIG3-213ENST00000590630 IGLV2-23P01705 113 aa9.35□□□□□ -0.91
LIG3-213ENST00000590630 CRIP2P52943 208 aaPredicted RBP9.35□□□□□ -0.91
LIG3-213ENST00000590630 CX3CL1P78423 397 aa9.35□□□□□ -0.91
LIG3-213ENST00000590630 CFHR3Q02985 330 aa9.35□□□□□ -0.91
LIG3-213ENST00000590630 FOXE3Q13461 319 aa9.35□□□□□ -0.91
LIG3-213ENST00000590630 KHDC1LQ5JSQ8 128 aa9.35□□□□□ -0.91
LIG3-213ENST00000590630 ZNF562Q6V9R5 426 aa9.35□□□□□ -0.91
LIG3-213ENST00000590630 PPP1R27Q86WC6 154 aa9.35□□□□□ -0.91
LIG3-213ENST00000590630 TMEM17Q86X19 198 aa9.35□□□□□ -0.91
LIG3-213ENST00000590630 OR6F1Q8NGZ6 308 aa9.35□□□□□ -0.91
LIG3-213ENST00000590630 OR52I2Q8NH67 350 aa9.35□□□□□ -0.91
LIG3-213ENST00000590630 OR4S2Q8NH73 311 aa9.35□□□□□ -0.91
LIG3-213ENST00000590630 MCFD2Q8NI22 146 aa9.35□□□□□ -0.91
LIG3-213ENST00000590630 TCTEX1D2Q8WW35 142 aa9.35□□□□□ -0.91
LIG3-213ENST00000590630 FCAMRQ8WWV6 532 aa9.35□□□□□ -0.91
LIG3-213ENST00000590630 MOB3AQ96BX8 217 aa9.35□□□□□ -0.91
LIG3-213ENST00000590630 DIRAS2Q96HU8 199 aa9.35□□□□□ -0.91
LIG3-213ENST00000590630 ZNF2Q9BSG1 426 aaPredicted RBP9.35□□□□□ -0.91
LIG3-213ENST00000590630 NXF2Q9GZY0 626 aaKnown RBP9.35□□□□□ -0.91
LIG3-213ENST00000590630 PARP11Q9NR21 331 aa9.35□□□□□ -0.91
LIG3-213ENST00000590630 CCL28Q9NRJ3 127 aa9.35□□□□□ -0.91
LIG3-213ENST00000590630 TAS2R8Q9NYW2 309 aa9.35□□□□□ -0.91
LIG3-213ENST00000590630 MTFP1Q9UDX5 166 aa9.35□□□□□ -0.91
LIG3-213ENST00000590630 MEGF8Q7Z7M0 2845 aa9.34□□□□□ -0.91
LIG3-213ENST00000590630 A0A1W2PRX2 142 aa9.34□□□□□ -0.91
LIG3-213ENST00000590630 GABARAPH6UMI1 98 aa9.34□□□□□ -0.91
LIG3-213ENST00000590630 FCN1O00602 326 aa9.34□□□□□ -0.91
LIG3-213ENST00000590630 FCGR3BO75015 233 aa9.34□□□□□ -0.91
LIG3-213ENST00000590630 IGHG4P01861 327 aa9.34□□□□□ -0.91
LIG3-213ENST00000590630 ELANEP08246 267 aa9.34□□□□□ -0.91
LIG3-213ENST00000590630 TBPP20226 339 aa9.34□□□□□ -0.91
LIG3-213ENST00000590630 SLC6A1P30531 599 aa9.34□□□□□ -0.91
LIG3-213ENST00000590630 KIR2DS2P43631 304 aa9.34□□□□□ -0.91
LIG3-213ENST00000590630 UBE2KP61086 200 aa9.34□□□□□ -0.91
LIG3-213ENST00000590630 TSPAN5P62079 268 aa9.34□□□□□ -0.91
LIG3-213ENST00000590630 RPL30P62888 115 aaKnown RBP9.34□□□□□ -0.91
LIG3-213ENST00000590630 NDPQ00604 133 aa9.34□□□□□ -0.91
LIG3-213ENST00000590630 SSBP1Q04837 148 aaKnown RBP9.34□□□□□ -0.91
LIG3-213ENST00000590630 CATR1Q13166 79 aa9.34□□□□□ -0.91
LIG3-213ENST00000590630 VMA21Q3ZAQ7 101 aa9.34□□□□□ -0.91
LIG3-213ENST00000590630 CXorf66Q5JRM2 361 aaPredicted RBP9.34□□□□□ -0.91
LIG3-213ENST00000590630 VAX1Q5SQQ9 334 aa9.34□□□□□ -0.91
LIG3-213ENST00000590630 PYHIN1Q6K0P9 492 aa9.34□□□□□ -0.91
LIG3-213ENST00000590630 ZNF818PQ6ZRF7 136 aa9.34□□□□□ -0.91
LIG3-213ENST00000590630 MFSD4AQ8N468 514 aa9.34□□□□□ -0.91
LIG3-213ENST00000590630 TCTEX1D1Q8N7M0 179 aa9.34□□□□□ -0.91
LIG3-213ENST00000590630 RNF152Q8N8N0 203 aa9.34□□□□□ -0.91
LIG3-213ENST00000590630 TEX45Q8NA69 505 aa9.34□□□□□ -0.91
LIG3-213ENST00000590630 FAM110DQ8TAY7 271 aaPredicted RBP9.34□□□□□ -0.91
LIG3-213ENST00000590630 R3HDM4Q96D70 268 aa9.34□□□□□ -0.91
LIG3-213ENST00000590630 DCUN1D5Q9BTE7 237 aa9.34□□□□□ -0.91
LIG3-213ENST00000590630 TPSG1Q9NRR2 321 aa9.34□□□□□ -0.91
LIG3-213ENST00000590630 ZFP57Q9NU63 452 aa9.34□□□□□ -0.91
LIG3-213ENST00000590630 KLK11Q9UBX7 282 aa9.34□□□□□ -0.91
LIG3-213ENST00000590630 NOTCH3Q9UM47 2321 aa9.34□□□□□ -0.91
LIG3-213ENST00000590630 TRAV41A0A0B4J266 112 aa9.33□□□□□ -0.92
LIG3-213ENST00000590630 SRRM4A7MD48 611 aaKnown RBP9.33□□□□□ -0.92
LIG3-213ENST00000590630 CTDSPLO15194 276 aa9.33□□□□□ -0.92
LIG3-213ENST00000590630 TNFSF12O43508 249 aa9.33□□□□□ -0.92
LIG3-213ENST00000590630 CA2P00918 260 aa9.33□□□□□ -0.92
LIG3-213ENST00000590630 CRYGBP07316 175 aa9.33□□□□□ -0.92
LIG3-213ENST00000590630 PPIFP30405 207 aaKnown RBP9.33□□□□□ -0.92
LIG3-213ENST00000590630 GNRHRP30968 328 aa9.33□□□□□ -0.92
LIG3-213ENST00000590630 RPL23AP62750 156 aaKnown RBP9.33□□□□□ -0.92
LIG3-213ENST00000590630 TMEM267Q0VDI3 215 aaPredicted RBP9.33□□□□□ -0.92
LIG3-213ENST00000590630 IL18Q14116 193 aa9.33□□□□□ -0.92
LIG3-213ENST00000590630 RNASE12Q5GAN4 147 aaKnown RBP9.33□□□□□ -0.92
LIG3-213ENST00000590630 RNASE10Q5GAN6 216 aaKnown RBP9.33□□□□□ -0.92
LIG3-213ENST00000590630 OR2B11Q5JQS5 317 aa9.33□□□□□ -0.92
LIG3-213ENST00000590630 LPCAT3Q6P1A2 487 aa9.33□□□□□ -0.92
LIG3-213ENST00000590630 CMTM1Q8IZ96 169 aa9.33□□□□□ -0.92
LIG3-213ENST00000590630 MINDY2Q8NBR6 621 aa9.33□□□□□ -0.92
LIG3-213ENST00000590630 ABHD5Q8WTS1 349 aa9.33□□□□□ -0.92
LIG3-213ENST00000590630 SMIM4Q8WVI0 70 aa9.33□□□□□ -0.92
LIG3-213ENST00000590630 ARPC1AQ92747 370 aa9.33□□□□□ -0.92
LIG3-213ENST00000590630 CLCC1Q96S66 551 aa9.33□□□□□ -0.92
LIG3-213ENST00000590630 WSB1Q9Y6I7 421 aa9.33□□□□□ -0.92
LIG3-213ENST00000590630 A3GALT2U3KPV4 340 aa9.33□□□□□ -0.92
LIG3-213ENST00000590630 A6NHS1 94 aa9.32□□□□□ -0.92
LIG3-213ENST00000590630 G3V318 75 aa9.32□□□□□ -0.92
LIG3-213ENST00000590630 RBFOX2O43251 390 aaKnown RBP eCLIP9.32□□□□□ -0.92
LIG3-213ENST00000590630 CREBL2O60519 120 aaPredicted RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms