RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 HOXA5P20719 270 aa14.5□□□□□ -0.09
SMARCA4-215ENST00000590574 CSN1S1P47710 185 aa14.5□□□□□ -0.09
SMARCA4-215ENST00000590574 TFF3Q07654 80 aa14.5□□□□□ -0.09
SMARCA4-215ENST00000590574 FAM162BQ5T6X4 162 aa14.5□□□□□ -0.09
SMARCA4-215ENST00000590574 OR1B1Q8NGR6 318 aa14.5□□□□□ -0.09
SMARCA4-215ENST00000590574 HARBI1Q96MB7 349 aa14.5□□□□□ -0.09
SMARCA4-215ENST00000590574 TMEM140Q9NV12 185 aa14.5□□□□□ -0.09
SMARCA4-215ENST00000590574 DDTP30046 118 aa14.5□□□□□ -0.09
SMARCA4-215ENST00000590574 S100A7P31151 101 aa14.5□□□□□ -0.09
SMARCA4-215ENST00000590574 RTP5Q14D33 572 aa14.5□□□□□ -0.09
SMARCA4-215ENST00000590574 NPCDR1Q9BY65 106 aa14.5□□□□□ -0.09
SMARCA4-215ENST00000590574 SLC35E4Q6ICL7 350 aa14.5□□□□□ -0.09
SMARCA4-215ENST00000590574 ETFRF1Q6IPR1 90 aa14.5□□□□□ -0.09
SMARCA4-215ENST00000590574 LEAP2Q969E1 77 aa14.5□□□□□ -0.09
SMARCA4-215ENST00000590574 C17orf98A8MV24 154 aa14.5□□□□□ -0.09
SMARCA4-215ENST00000590574 CELA3BP08861 270 aa14.5□□□□□ -0.09
SMARCA4-215ENST00000590574 AGAP20933 346 aa14.5□□□□□ -0.09
SMARCA4-215ENST00000590574 AHCTF1Q8WYP5 2266 aa14.5□□□□□ -0.09
SMARCA4-215ENST00000590574 PAX5Q02548 391 aa14.5□□□□□ -0.09
SMARCA4-215ENST00000590574 BCL2L2Q92843 193 aaPredicted RBP14.5□□□□□ -0.09
SMARCA4-215ENST00000590574 SPNS3Q6ZMD2 512 aa14.49□□□□□ -0.09
SMARCA4-215ENST00000590574 ABHD12Q8N2K0 398 aa14.49□□□□□ -0.09
SMARCA4-215ENST00000590574 RNF2Q99496 336 aa14.49□□□□□ -0.09
SMARCA4-215ENST00000590574 SDF2L1Q9HCN8 221 aa14.49□□□□□ -0.09
SMARCA4-215ENST00000590574 COLQQ9Y215 455 aaPredicted RBP14.49□□□□□ -0.09
SMARCA4-215ENST00000590574 SPAARA0A1B0GVQ0 90 aa14.49□□□□□ -0.09
SMARCA4-215ENST00000590574 FOXG1P55316 489 aaPredicted RBP14.49□□□□□ -0.09
SMARCA4-215ENST00000590574 ZFP36L1Q07352 338 aaKnown RBP14.49□□□□□ -0.09
SMARCA4-215ENST00000590574 ZNF324BQ6AW86 544 aaPredicted RBP14.49□□□□□ -0.09
SMARCA4-215ENST00000590574 TRAV34A0A0B4J273 112 aa14.49□□□□□ -0.09
SMARCA4-215ENST00000590574 C5orf52A6NGY3 159 aa14.49□□□□□ -0.09
SMARCA4-215ENST00000590574 OTX1P32242 354 aaPredicted RBP14.49□□□□□ -0.09
SMARCA4-215ENST00000590574 ELOBQ15370 118 aa14.49□□□□□ -0.09
SMARCA4-215ENST00000590574 CCL13Q99616 98 aa14.49□□□□□ -0.09
SMARCA4-215ENST00000590574 CEACAM18A8MTB9 384 aa14.49□□□□□ -0.09
SMARCA4-215ENST00000590574 TMEM250H0YL14 139 aa14.49□□□□□ -0.09
SMARCA4-215ENST00000590574 REG1BP48304 166 aa14.49□□□□□ -0.09
SMARCA4-215ENST00000590574 WFIKKN1Q96NZ8 548 aa14.49□□□□□ -0.09
SMARCA4-215ENST00000590574 TBX15Q96SF7 602 aa14.49□□□□□ -0.09
SMARCA4-215ENST00000590574 SRD5A3Q9H8P0 318 aa14.49□□□□□ -0.09
SMARCA4-215ENST00000590574 A0A1W2PN81 502 aa14.48□□□□□ -0.09
SMARCA4-215ENST00000590574 TCAPO15273 167 aa14.48□□□□□ -0.09
SMARCA4-215ENST00000590574 GCGP01275 180 aa14.48□□□□□ -0.09
SMARCA4-215ENST00000590574 HGFACQ04756 655 aa14.48□□□□□ -0.09
SMARCA4-215ENST00000590574 AARDQ4LEZ3 155 aa14.48□□□□□ -0.09
SMARCA4-215ENST00000590574 ITLN1Q8WWA0 313 aa14.48□□□□□ -0.09
SMARCA4-215ENST00000590574 TIMD4Q96H15 378 aa14.48□□□□□ -0.09
SMARCA4-215ENST00000590574 ANAPC10Q9UM13 185 aa14.48□□□□□ -0.09
SMARCA4-215ENST00000590574 J3QW42 95 aa14.48□□□□□ -0.09
SMARCA4-215ENST00000590574 PDPNQ86YL7 162 aa14.48□□□□□ -0.09
SMARCA4-215ENST00000590574 VSTM2AQ8TAG5 236 aa14.48□□□□□ -0.09
SMARCA4-215ENST00000590574 PHF3Q92576 2039 aaKnown RBP14.48□□□□□ -0.09
SMARCA4-215ENST00000590574 PRR33A8MZF0 331 aa14.48□□□□□ -0.09
SMARCA4-215ENST00000590574 VN1R17PQ8TDU5 208 aa14.48□□□□□ -0.09
SMARCA4-215ENST00000590574 FLYWCH2Q96CP2 140 aaKnown RBP14.48□□□□□ -0.09
SMARCA4-215ENST00000590574 GNB4Q9HAV0 340 aa14.48□□□□□ -0.09
SMARCA4-215ENST00000590574 IL19Q9UHD0 177 aa14.48□□□□□ -0.09
SMARCA4-215ENST00000590574 SLC35B1P78383 322 aa14.48□□□□□ -0.09
SMARCA4-215ENST00000590574 TNXAQ16473 311 aa14.48□□□□□ -0.09
SMARCA4-215ENST00000590574 CALYQ9NYX4 217 aa14.48□□□□□ -0.09
SMARCA4-215ENST00000590574 GAMTQ14353 236 aa14.47□□□□□ -0.09
SMARCA4-215ENST00000590574 C10orf113Q5VZT2 155 aa14.47□□□□□ -0.09
SMARCA4-215ENST00000590574 HEPN1Q6WQI6 88 aa14.47□□□□□ -0.09
SMARCA4-215ENST00000590574 ACP7Q6ZNF0 438 aa14.47□□□□□ -0.09
SMARCA4-215ENST00000590574 TMEM183AQ8IXX5 376 aa14.47□□□□□ -0.09
SMARCA4-215ENST00000590574 OR4X1Q8NH49 305 aa14.47□□□□□ -0.09
SMARCA4-215ENST00000590574 VSIRQ9H7M9 311 aa14.47□□□□□ -0.09
SMARCA4-215ENST00000590574 PAM16Q9Y3D7 125 aa14.47□□□□□ -0.09
SMARCA4-215ENST00000590574 RTTNQ86VV8 2226 aa14.47□□□□□ -0.09
SMARCA4-215ENST00000590574 WNT5AP41221 380 aa14.47□□□□□ -0.09
SMARCA4-215ENST00000590574 HIF1ANQ9NWT6 349 aa14.47□□□□□ -0.09
SMARCA4-215ENST00000590574 C9JQL5 133 aa14.47□□□□□ -0.09
SMARCA4-215ENST00000590574 ATXN7O15265 892 aaPredicted RBP14.47□□□□□ -0.09
SMARCA4-215ENST00000590574 TMEM11P17152 192 aa14.47□□□□□ -0.09
SMARCA4-215ENST00000590574 CD82P27701 267 aa14.47□□□□□ -0.09
SMARCA4-215ENST00000590574 TMEM42Q69YG0 159 aa14.47□□□□□ -0.09
SMARCA4-215ENST00000590574 TRGV8A0A0C4DH27 118 aa14.47□□□□□ -0.09
SMARCA4-215ENST00000590574 CYP2G1PQ6ZSU1 146 aa14.47□□□□□ -0.09
SMARCA4-215ENST00000590574 FOXL2NBQ6ZUU3 175 aa14.47□□□□□ -0.09
SMARCA4-215ENST00000590574 TXNDC17Q9BRA2 123 aa14.47□□□□□ -0.09
SMARCA4-215ENST00000590574 COA4Q9NYJ1 87 aa14.47□□□□□ -0.09
SMARCA4-215ENST00000590574 JPT1Q9UK76 154 aa14.47□□□□□ -0.09
SMARCA4-215ENST00000590574 P2RY6Q15077 328 aa14.46□□□□□ -0.09
SMARCA4-215ENST00000590574 C1orf174Q8IYL3 243 aa14.46□□□□□ -0.09
SMARCA4-215ENST00000590574 NAGKQ9UJ70 344 aa14.46□□□□□ -0.09
SMARCA4-215ENST00000590574 ETV2O00321 342 aaPredicted RBP14.46□□□□□ -0.09
SMARCA4-215ENST00000590574 PSG7Q13046 419 aa14.46□□□□□ -0.09
SMARCA4-215ENST00000590574 RPL39P5Q59GN2 51 aa14.46□□□□□ -0.09
SMARCA4-215ENST00000590574 SMIM15Q7Z3B0 74 aa14.46□□□□□ -0.09
SMARCA4-215ENST00000590574 KIAA1549LQ6ZVL6 1849 aa14.46□□□□□ -0.09
SMARCA4-215ENST00000590574 NTN3O00634 580 aaPredicted RBP14.46□□□□□ -0.09
SMARCA4-215ENST00000590574 SAP30LQ9HAJ7 183 aa14.46□□□□□ -0.09
SMARCA4-215ENST00000590574 GCSAMQ8N6F7 178 aa14.46□□□□□ -0.1
SMARCA4-215ENST00000590574 OR13A1Q8NGR1 328 aa14.46□□□□□ -0.1
SMARCA4-215ENST00000590574 ONECUT1Q9UBC0 465 aa14.46□□□□□ -0.1
SMARCA4-215ENST00000590574 ZDHHC8Q9ULC8 765 aa14.46□□□□□ -0.1
SMARCA4-215ENST00000590574 HOXB1P14653 301 aaPredicted RBP14.45□□□□□ -0.1
SMARCA4-215ENST00000590574 COX7A1P24310 79 aa14.45□□□□□ -0.1
SMARCA4-215ENST00000590574 ZNF497Q6ZNH5 498 aa14.45□□□□□ -0.1
SMARCA4-215ENST00000590574 RPEQ96AT9 228 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms