RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 PEX14O75381 377 aa15.23■□□□□ 0.03
DDX39A-214ENST00000590556 PGLYRP1O75594 196 aaPredicted RBP15.23■□□□□ 0.03
DDX39A-214ENST00000590556 IL7P13232 177 aa15.23■□□□□ 0.03
DDX39A-214ENST00000590556 CNTFRP26992 372 aa15.23■□□□□ 0.03
DDX39A-214ENST00000590556 CATR1Q13166 79 aa15.23■□□□□ 0.03
DDX39A-214ENST00000590556 PHLDA2Q53GA4 152 aa15.23■□□□□ 0.03
DDX39A-214ENST00000590556 OR2B11Q5JQS5 317 aa15.23■□□□□ 0.03
DDX39A-214ENST00000590556 IDO2Q6ZQW0 420 aa15.23■□□□□ 0.03
DDX39A-214ENST00000590556 Q8N9W7 124 aa15.23■□□□□ 0.03
DDX39A-214ENST00000590556 NPBQ8NG41 125 aa15.23■□□□□ 0.03
DDX39A-214ENST00000590556 TSNAXQ99598 290 aaKnown RBP15.23■□□□□ 0.03
DDX39A-214ENST00000590556 MDFIQ99750 246 aa15.23■□□□□ 0.03
DDX39A-214ENST00000590556 RASL11BQ9BPW5 248 aa15.23■□□□□ 0.03
DDX39A-214ENST00000590556 C16orf95Q9H693 158 aa15.23■□□□□ 0.03
DDX39A-214ENST00000590556 ZNF702PQ9H963 129 aa15.23■□□□□ 0.03
DDX39A-214ENST00000590556 BEX1Q9HBH7 125 aa15.23■□□□□ 0.03
DDX39A-214ENST00000590556 SLC2A8Q9NY64 477 aa15.23■□□□□ 0.03
DDX39A-214ENST00000590556 KIAA1456Q9P272 454 aa15.23■□□□□ 0.03
DDX39A-214ENST00000590556 SH2D7A6NKC9 451 aaPredicted RBP15.22■□□□□ 0.03
DDX39A-214ENST00000590556 SHOXO15266 292 aa15.22■□□□□ 0.03
DDX39A-214ENST00000590556 CRYZL1O95825 349 aa15.22■□□□□ 0.03
DDX39A-214ENST00000590556 RLN1P04808 185 aa15.22■□□□□ 0.03
DDX39A-214ENST00000590556 ECI1P42126 302 aa15.22■□□□□ 0.03
DDX39A-214ENST00000590556 KIR2DS2P43631 304 aa15.22■□□□□ 0.03
DDX39A-214ENST00000590556 LGALS7P47929 136 aa15.22■□□□□ 0.03
DDX39A-214ENST00000590556 ZNF846Q147U1 533 aa15.22■□□□□ 0.03
DDX39A-214ENST00000590556 TMEM177Q53S58 311 aa15.22■□□□□ 0.03
DDX39A-214ENST00000590556 ARSJQ5FYB0 599 aaPredicted RBP15.22■□□□□ 0.03
DDX39A-214ENST00000590556 C9orf152Q5JTZ5 239 aa15.22■□□□□ 0.03
DDX39A-214ENST00000590556 OR51H1Q8NH63 302 aa15.22■□□□□ 0.03
DDX39A-214ENST00000590556 OR2T6Q8NHC8 308 aa15.22■□□□□ 0.03
DDX39A-214ENST00000590556 ZFAND1Q8TCF1 268 aa15.22■□□□□ 0.03
DDX39A-214ENST00000590556 MARCH1Q8TCQ1 289 aa15.22■□□□□ 0.03
DDX39A-214ENST00000590556 ZNF486Q96H40 463 aaPredicted RBP15.22■□□□□ 0.03
DDX39A-214ENST00000590556 WDR12Q9GZL7 423 aaKnown RBP15.22■□□□□ 0.03
DDX39A-214ENST00000590556 LINC00854A0A1B0GVQ3 168 aa15.21■□□□□ 0.03
DDX39A-214ENST00000590556 MDKP21741 143 aaPredicted RBP15.21■□□□□ 0.03
DDX39A-214ENST00000590556 Q6ZS46 218 aa15.21■□□□□ 0.03
DDX39A-214ENST00000590556 Q8N2B8 174 aa15.21■□□□□ 0.03
DDX39A-214ENST00000590556 FAM71E2Q8N5Q1 922 aa15.21■□□□□ 0.03
DDX39A-214ENST00000590556 POC5Q8NA72 575 aa15.21■□□□□ 0.03
DDX39A-214ENST00000590556 OR13C8Q8NGS7 320 aa15.21■□□□□ 0.03
DDX39A-214ENST00000590556 OR4S2Q8NH73 311 aa15.21■□□□□ 0.03
DDX39A-214ENST00000590556 LINC01006Q8NI28 216 aa15.21■□□□□ 0.03
DDX39A-214ENST00000590556 MRGPRFQ96AM1 343 aa15.21■□□□□ 0.03
DDX39A-214ENST00000590556 HARBI1Q96MB7 349 aa15.21■□□□□ 0.03
DDX39A-214ENST00000590556 CCDC32Q9BV29 185 aa15.21■□□□□ 0.03
DDX39A-214ENST00000590556 LIN7CQ9NUP9 197 aaKnown RBP15.21■□□□□ 0.03
DDX39A-214ENST00000590556 SIGLEC9Q9Y336 463 aa15.21■□□□□ 0.03
DDX39A-214ENST00000590556 A0A1B0GUS0 222 aa15.2■□□□□ 0.02
DDX39A-214ENST00000590556 CLPSL1A2RUU4 121 aa15.2■□□□□ 0.02
DDX39A-214ENST00000590556 RRHO14718 337 aa15.2■□□□□ 0.02
DDX39A-214ENST00000590556 NDUFA3O95167 84 aa15.2■□□□□ 0.02
DDX39A-214ENST00000590556 PI3P19957 117 aa15.2■□□□□ 0.02
DDX39A-214ENST00000590556 CD40LGP29965 261 aa15.2■□□□□ 0.02
DDX39A-214ENST00000590556 BRWD1-AS2P59051 145 aa15.2■□□□□ 0.02
DDX39A-214ENST00000590556 PSG5Q15238 335 aa15.2■□□□□ 0.02
DDX39A-214ENST00000590556 SURF2Q15527 256 aaPredicted RBP15.2■□□□□ 0.02
DDX39A-214ENST00000590556 C5orf64Q2M2E5 130 aa15.2■□□□□ 0.02
DDX39A-214ENST00000590556 SPAG16Q8N0X2 631 aa15.2■□□□□ 0.02
DDX39A-214ENST00000590556 OSR1Q8TAX0 266 aaPredicted RBP15.2■□□□□ 0.02
DDX39A-214ENST00000590556 SLC2A9Q9NRM0 540 aa15.2■□□□□ 0.02
DDX39A-214ENST00000590556 MMP24Q9Y5R2 645 aa15.2■□□□□ 0.02
DDX39A-214ENST00000590556 SPDEFO95238 335 aa15.19■□□□□ 0.02
DDX39A-214ENST00000590556 CTSDP07339 412 aaPredicted RBP15.19■□□□□ 0.02
DDX39A-214ENST00000590556 PIGPP57054 158 aa15.19■□□□□ 0.02
DDX39A-214ENST00000590556 RND3P61587 244 aa15.19■□□□□ 0.02
DDX39A-214ENST00000590556 PLGLAQ15195 96 aa15.19■□□□□ 0.02
DDX39A-214ENST00000590556 AWAT1Q58HT5 328 aa15.19■□□□□ 0.02
DDX39A-214ENST00000590556 TBC1D26Q86UD7 250 aa15.19■□□□□ 0.02
DDX39A-214ENST00000590556 CD300LFQ8TDQ1 290 aa15.19■□□□□ 0.02
DDX39A-214ENST00000590556 SCGB3A2Q96PL1 93 aa15.19■□□□□ 0.02
DDX39A-214ENST00000590556 FBXL15Q9H469 300 aa15.19■□□□□ 0.02
DDX39A-214ENST00000590556 METTL1Q9UBP6 276 aaKnown RBP15.19■□□□□ 0.02
DDX39A-214ENST00000590556 C14orf166Q9Y224 244 aaKnown RBP15.19■□□□□ 0.02
DDX39A-214ENST00000590556 RNF114Q9Y508 228 aa15.19■□□□□ 0.02
DDX39A-214ENST00000590556 NAP1L6A6NFF2 107 aa15.18■□□□□ 0.02
DDX39A-214ENST00000590556 SRRM4A7MD48 611 aaKnown RBP15.18■□□□□ 0.02
DDX39A-214ENST00000590556 CENPXA8MT69 81 aa15.18■□□□□ 0.02
DDX39A-214ENST00000590556 RBFOX2O43251 390 aaKnown RBP eCLIP15.18■□□□□ 0.023e-6■■■■□ 19.7
DDX39A-214ENST00000590556 SLC25A17O43808 307 aa15.18■□□□□ 0.02
DDX39A-214ENST00000590556 RAMP3O60896 148 aa15.18■□□□□ 0.02
DDX39A-214ENST00000590556 IGLV2-23P01705 113 aa15.18■□□□□ 0.02
DDX39A-214ENST00000590556 VDAC2P45880 294 aaPredicted RBP15.18■□□□□ 0.02
DDX39A-214ENST00000590556 COMPP49747 757 aaPredicted RBP15.18■□□□□ 0.02
DDX39A-214ENST00000590556 LIN54Q6MZP7 749 aa15.18■□□□□ 0.02
DDX39A-214ENST00000590556 TCTEX1D1Q8N7M0 179 aa15.18■□□□□ 0.02
DDX39A-214ENST00000590556 CCDC71LQ8N9Z2 235 aa15.18■□□□□ 0.02
DDX39A-214ENST00000590556 COPZ2Q9P299 210 aa15.18■□□□□ 0.02
DDX39A-214ENST00000590556 GPR132Q9UNW8 380 aa15.18■□□□□ 0.02
DDX39A-214ENST00000590556 MPPED1O15442 326 aa15.17■□□□□ 0.02
DDX39A-214ENST00000590556 F2RP25116 425 aa15.17■□□□□ 0.02
DDX39A-214ENST00000590556 VMA21Q3ZAQ7 101 aa15.17■□□□□ 0.02
DDX39A-214ENST00000590556 C7orf50Q9BRJ6 194 aaKnown RBP15.17■□□□□ 0.02
DDX39A-214ENST00000590556 HPRT1P00492 218 aa15.16■□□□□ 0.02
DDX39A-214ENST00000590556 IGHG2P01859 326 aa15.16■□□□□ 0.02
DDX39A-214ENST00000590556 HLA-DRB1P01911 266 aa15.16■□□□□ 0.02
DDX39A-214ENST00000590556 TMEM95Q3KNT9 176 aa15.16■□□□□ 0.02
DDX39A-214ENST00000590556 C12orf54Q6X4T0 127 aa15.16■□□□□ 0.02
DDX39A-214ENST00000590556 SLC35E3Q7Z769 313 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms