RNA–Protein interactions for RNA: ENST00000589641.1

RFX2-213, Transcript of regulatory factor X2, human

TSL 3

Gene RFX2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-213	ENST00000589641	LIN7C	Q9NUP9	197 aa	Known RBP	5.1	□□□□□ -1.59
RFX2-213	ENST00000589641	C19orf73	Q9NVV2	129 aa		5.1	□□□□□ -1.59
RFX2-213	ENST00000589641	NAV3	Q8IVL0	2385 aa		5.09	□□□□□ -1.59
RFX2-213	ENST00000589641	FLNA	P21333	2647 aa	Known RBP	5.09	□□□□□ -1.59
RFX2-213	ENST00000589641	MPTX1	A8MV57	137 aa		5.09	□□□□□ -1.59
RFX2-213	ENST00000589641		A8MV72	311 aa	Predicted RBP	5.09	□□□□□ -1.59
RFX2-213	ENST00000589641	ODF3B	A8MYP8	253 aa		5.09	□□□□□ -1.59
RFX2-213	ENST00000589641		B4DSR2	109 aa		5.09	□□□□□ -1.59
RFX2-213	ENST00000589641		G3V3Q6	166 aa		5.09	□□□□□ -1.59
RFX2-213	ENST00000589641	RNASEK-C17orf49	H0YIS7	233 aa		5.09	□□□□□ -1.59
RFX2-213	ENST00000589641	BUB1B-PAK6	H3BSN5	160 aa		5.09	□□□□□ -1.59
RFX2-213	ENST00000589641		M0R1X1	148 aa		5.09	□□□□□ -1.59
RFX2-213	ENST00000589641	GOSR2	O14653	212 aa		5.09	□□□□□ -1.59
RFX2-213	ENST00000589641	TOR1A	O14656	332 aa		5.09	□□□□□ -1.59
RFX2-213	ENST00000589641	RBFOX2	O43251	390 aa	Known RBP eCLIP	5.09	□□□□□ -1.59
RFX2-213	ENST00000589641	RAMP3	O60896	148 aa		5.09	□□□□□ -1.59
RFX2-213	ENST00000589641	PF4	P02776	101 aa		5.09	□□□□□ -1.59
RFX2-213	ENST00000589641	MSMB	P08118	114 aa		5.09	□□□□□ -1.59
RFX2-213	ENST00000589641	HOXB5	P09067	269 aa		5.09	□□□□□ -1.59
RFX2-213	ENST00000589641	GIP	P09681	153 aa	Predicted RBP	5.09	□□□□□ -1.59
RFX2-213	ENST00000589641		P0C879	139 aa		5.09	□□□□□ -1.59
RFX2-213	ENST00000589641	CT45A6	P0DMU7	189 aa		5.09	□□□□□ -1.59
RFX2-213	ENST00000589641	CT45A5	P0DMU8	189 aa		5.09	□□□□□ -1.59
RFX2-213	ENST00000589641	CT45A7	P0DMV0	189 aa		5.09	□□□□□ -1.59
RFX2-213	ENST00000589641	LPAR6	P43657	344 aa		5.09	□□□□□ -1.59
RFX2-213	ENST00000589641	THBS3	P49746	956 aa		5.09	□□□□□ -1.59
RFX2-213	ENST00000589641	RAP2B	P61225	183 aa		5.09	□□□□□ -1.59
RFX2-213	ENST00000589641	DIAPH2-AS1	Q14236	149 aa		5.09	□□□□□ -1.59
RFX2-213	ENST00000589641	LDLRAD2	Q5SZI1	272 aa		5.09	□□□□□ -1.59
RFX2-213	ENST00000589641	TMEM268	Q5VZI3	342 aa		5.09	□□□□□ -1.59
RFX2-213	ENST00000589641	GGNBP1	Q5YKI7	109 aa		5.09	□□□□□ -1.59
RFX2-213	ENST00000589641	GSG1L	Q6UXU4	331 aa		5.09	□□□□□ -1.59
RFX2-213	ENST00000589641	LYZL2	Q7Z4W2	148 aa		5.09	□□□□□ -1.59
RFX2-213	ENST00000589641	VMO1	Q7Z5L0	202 aa		5.09	□□□□□ -1.59
RFX2-213	ENST00000589641	ZNF695	Q8IW36	515 aa		5.09	□□□□□ -1.59
RFX2-213	ENST00000589641	SPAG16	Q8N0X2	631 aa		5.09	□□□□□ -1.59
RFX2-213	ENST00000589641	PNKD	Q8N490	385 aa		5.09	□□□□□ -1.59
RFX2-213	ENST00000589641	SLC35G3	Q8N808	338 aa		5.09	□□□□□ -1.59
RFX2-213	ENST00000589641	ZNF383	Q8NA42	475 aa		5.09	□□□□□ -1.59
RFX2-213	ENST00000589641	DRAXIN	Q8NBI3	349 aa	Predicted RBP	5.09	□□□□□ -1.59
RFX2-213	ENST00000589641	OR5AN1	Q8NGI8	311 aa		5.09	□□□□□ -1.59
RFX2-213	ENST00000589641	OR13D1	Q8NGV5	346 aa		5.09	□□□□□ -1.59
RFX2-213	ENST00000589641	CD300LF	Q8TDQ1	290 aa		5.09	□□□□□ -1.59
RFX2-213	ENST00000589641	RBPMS	Q93062	196 aa	Known RBP	5.09	□□□□□ -1.59
RFX2-213	ENST00000589641	ADTRP	Q96IZ2	230 aa		5.09	□□□□□ -1.59
RFX2-213	ENST00000589641	OR10C1	Q96KK4	312 aa		5.09	□□□□□ -1.59
RFX2-213	ENST00000589641	S1PR3	Q99500	378 aa		5.09	□□□□□ -1.59
RFX2-213	ENST00000589641	FOXC2	Q99958	501 aa		5.09	□□□□□ -1.59
RFX2-213	ENST00000589641	REG4	Q9BYZ8	158 aa		5.09	□□□□□ -1.59
RFX2-213	ENST00000589641	TMED3	Q9Y3Q3	217 aa		5.09	□□□□□ -1.59
RFX2-213	ENST00000589641	ZAN	Q9Y493	2812 aa		5.09	□□□□□ -1.6
RFX2-213	ENST00000589641	PIGBOS1	A0A0B4J2F0	54 aa		5.08	□□□□□ -1.6
RFX2-213	ENST00000589641		A0A0G2JRQ6	117 aa		5.08	□□□□□ -1.6
RFX2-213	ENST00000589641	CCS	O14618	274 aa		5.08	□□□□□ -1.6
RFX2-213	ENST00000589641	TOX4	O94842	621 aa		5.08	□□□□□ -1.6
RFX2-213	ENST00000589641	HPRT1	P00492	218 aa		5.08	□□□□□ -1.6
RFX2-213	ENST00000589641	IGKV1-5	P01602	117 aa		5.08	□□□□□ -1.6
RFX2-213	ENST00000589641	SERPINE2	P07093	398 aa		5.08	□□□□□ -1.6
RFX2-213	ENST00000589641	SLC25A6	P12236	298 aa		5.08	□□□□□ -1.6
RFX2-213	ENST00000589641	ZNF16	P17020	682 aa	Predicted RBP	5.08	□□□□□ -1.6
RFX2-213	ENST00000589641	VDAC1	P21796	283 aa		5.08	□□□□□ -1.6
RFX2-213	ENST00000589641	GATA3	P23771	443 aa		5.08	□□□□□ -1.6
RFX2-213	ENST00000589641	COX7A1	P24310	79 aa		5.08	□□□□□ -1.6
RFX2-213	ENST00000589641	IL3RA	P26951	378 aa		5.08	□□□□□ -1.6
RFX2-213	ENST00000589641	KIR2DS2	P43631	304 aa		5.08	□□□□□ -1.6
RFX2-213	ENST00000589641	UBE2E1	P51965	193 aa		5.08	□□□□□ -1.6
RFX2-213	ENST00000589641	CYCS	P99999	105 aa	Known RBP	5.08	□□□□□ -1.6
RFX2-213	ENST00000589641	PRB3	Q04118	309 aa	Predicted RBP	5.08	□□□□□ -1.6
RFX2-213	ENST00000589641	ZNF816	Q0VGE8	651 aa	Predicted RBP	5.08	□□□□□ -1.6
RFX2-213	ENST00000589641	KLRD1	Q13241	179 aa		5.08	□□□□□ -1.6
RFX2-213	ENST00000589641		Q5BKY6	102 aa		5.08	□□□□□ -1.6
RFX2-213	ENST00000589641	NMS	Q5H8A3	153 aa		5.08	□□□□□ -1.6
RFX2-213	ENST00000589641	LINC01356	Q8N9X3	169 aa		5.08	□□□□□ -1.6
RFX2-213	ENST00000589641	OR10X1	Q8NGY0	326 aa		5.08	□□□□□ -1.6
RFX2-213	ENST00000589641	TCTEX1D2	Q8WW35	142 aa		5.08	□□□□□ -1.6
RFX2-213	ENST00000589641	LSM10	Q969L4	123 aa	Known RBP	5.08	□□□□□ -1.6
RFX2-213	ENST00000589641	SEC22A	Q96IW7	307 aa		5.08	□□□□□ -1.6
RFX2-213	ENST00000589641	RHOV	Q96L33	236 aa		5.08	□□□□□ -1.6
RFX2-213	ENST00000589641	C2orf50	Q96LR7	162 aa		5.08	□□□□□ -1.6
RFX2-213	ENST00000589641		Q96MF0	132 aa		5.08	□□□□□ -1.6
RFX2-213	ENST00000589641	NABP2	Q9BQ15	211 aa		5.08	□□□□□ -1.6
RFX2-213	ENST00000589641	PCGF1	Q9BSM1	259 aa		5.08	□□□□□ -1.6
RFX2-213	ENST00000589641	NMES1	Q9C002	83 aa		5.08	□□□□□ -1.6
RFX2-213	ENST00000589641	PLEKHA2	Q9HB19	425 aa		5.08	□□□□□ -1.6
RFX2-213	ENST00000589641	LPAR2	Q9HBW0	351 aa		5.08	□□□□□ -1.6
RFX2-213	ENST00000589641	DPM3	Q9P2X0	92 aa		5.08	□□□□□ -1.6
RFX2-213	ENST00000589641	PRELID3B	Q9Y3B1	194 aa		5.08	□□□□□ -1.6
RFX2-213	ENST00000589641	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	5.08	□□□□□ -1.6
RFX2-213	ENST00000589641	TLN2	Q9Y4G6	2542 aa		5.08	□□□□□ -1.6
RFX2-213	ENST00000589641	ACAN	P16112	2415 aa		5.08	□□□□□ -1.6
RFX2-213	ENST00000589641	TRAV14DV4	A0A0A6YYC5	116 aa		5.07	□□□□□ -1.6
RFX2-213	ENST00000589641	TRAV20	A0A0B4J274	112 aa		5.07	□□□□□ -1.6
RFX2-213	ENST00000589641	CENPVL3	A0A0U1RRI6	287 aa		5.07	□□□□□ -1.6
RFX2-213	ENST00000589641		A0A1B0GU03	582 aa		5.07	□□□□□ -1.6
RFX2-213	ENST00000589641	C13orf42	A0A1B0GVH6	325 aa		5.07	□□□□□ -1.6
RFX2-213	ENST00000589641	C5orf51	A6NDU8	294 aa		5.07	□□□□□ -1.6
RFX2-213	ENST00000589641	LEUTX	A8MZ59	168 aa		5.07	□□□□□ -1.6
RFX2-213	ENST00000589641		H0YJW9	148 aa		5.07	□□□□□ -1.6
RFX2-213	ENST00000589641	SMLR1	H3BR10	107 aa		5.07	□□□□□ -1.6
RFX2-213	ENST00000589641	BOLA2-SMG1P6	H3BVE0	249 aa		5.07	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 38 ms