RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 H0YJW9 148 aa18.24■□□□□ 0.51
ACTN4-210ENST00000588618 SRPXP78539 464 aa18.24■□□□□ 0.51
ACTN4-210ENST00000588618 ZNF431Q8TF32 576 aaPredicted RBP18.24■□□□□ 0.51
ACTN4-210ENST00000588618 GLYATL2Q8WU03 294 aa18.24■□□□□ 0.51
ACTN4-210ENST00000588618 C22orf15Q8WYQ4 148 aa18.24■□□□□ 0.51
ACTN4-210ENST00000588618 PHB2Q99623 299 aa18.24■□□□□ 0.51
ACTN4-210ENST00000588618 TMEM222Q9H0R3 208 aa18.24■□□□□ 0.51
ACTN4-210ENST00000588618 hCG_2014768A0A024R1R8 64 aa18.23■□□□□ 0.51
ACTN4-210ENST00000588618 PIGBOS1A0A0B4J2F0 54 aa18.23■□□□□ 0.51
ACTN4-210ENST00000588618 DUS4LO95620 317 aaKnown RBP18.23■□□□□ 0.51
ACTN4-210ENST00000588618 TMEM187Q14656 261 aa18.23■□□□□ 0.51
ACTN4-210ENST00000588618 ANKRD55Q3KP44 614 aa18.23■□□□□ 0.51
ACTN4-210ENST00000588618 PDPNQ86YL7 162 aa18.23■□□□□ 0.51
ACTN4-210ENST00000588618 SNRPGP15A8MWD9 76 aa18.23■□□□□ 0.51
ACTN4-210ENST00000588618 RAMP3O60896 148 aa18.23■□□□□ 0.51
ACTN4-210ENST00000588618 CRYZL1O95825 349 aa18.23■□□□□ 0.51
ACTN4-210ENST00000588618 RPA2P15927 270 aa18.23■□□□□ 0.51
ACTN4-210ENST00000588618 SCGB2A2Q13296 93 aa18.23■□□□□ 0.51
ACTN4-210ENST00000588618 ZNF585BQ52M93 769 aa18.23■□□□□ 0.51
ACTN4-210ENST00000588618 DHRS7BQ6IAN0 325 aaPredicted RBP18.23■□□□□ 0.51
ACTN4-210ENST00000588618 ZNF695Q8IW36 515 aa18.23■□□□□ 0.51
ACTN4-210ENST00000588618 UXS1Q8NBZ7 420 aa18.23■□□□□ 0.51
ACTN4-210ENST00000588618 LHFPL5Q8TAF8 219 aa18.23■□□□□ 0.51
ACTN4-210ENST00000588618 FLYWCH2Q96CP2 140 aaKnown RBP18.23■□□□□ 0.51
ACTN4-210ENST00000588618 FAM212BQ9NTI7 297 aaPredicted RBP18.23■□□□□ 0.51
ACTN4-210ENST00000588618 RBFOX2O43251 390 aaKnown RBP eCLIP18.22■□□□□ 0.518e-8■■■□□ 17.8
ACTN4-210ENST00000588618 UCP1P25874 307 aa18.22■□□□□ 0.51
ACTN4-210ENST00000588618 CD1BP29016 333 aa18.22■□□□□ 0.51
ACTN4-210ENST00000588618 HES1Q14469 280 aa18.22■□□□□ 0.51
ACTN4-210ENST00000588618 LIN54Q6MZP7 749 aa18.22■□□□□ 0.51
ACTN4-210ENST00000588618 C9orf139Q6ZV77 190 aa18.22■□□□□ 0.51
ACTN4-210ENST00000588618 LGI3Q8N145 548 aa18.22■□□□□ 0.51
ACTN4-210ENST00000588618 SSNA1O43805 119 aa18.21■□□□□ 0.51
ACTN4-210ENST00000588618 HPRT1P00492 218 aa18.21■□□□□ 0.51
ACTN4-210ENST00000588618 LPAR6P43657 344 aa18.21■□□□□ 0.51
ACTN4-210ENST00000588618 LIAT1Q6ZQX7 453 aa18.21■□□□□ 0.51
ACTN4-210ENST00000588618 OR4C13Q8NGP0 309 aa18.21■□□□□ 0.51
ACTN4-210ENST00000588618 MITD1Q8WV92 249 aa18.21■□□□□ 0.51
ACTN4-210ENST00000588618 MEGF9Q9H1U4 602 aa18.21■□□□□ 0.51
ACTN4-210ENST00000588618 NAV3Q8IVL0 2385 aa18.21■□□□□ 0.5
ACTN4-210ENST00000588618 ATG12O94817 140 aa18.2■□□□□ 0.5
ACTN4-210ENST00000588618 C12orf45Q8N5I9 185 aaPredicted RBP18.2■□□□□ 0.5
ACTN4-210ENST00000588618 CFHR4Q92496 578 aa18.2■□□□□ 0.5
ACTN4-210ENST00000588618 ZDHHC16Q969W1 377 aa18.2■□□□□ 0.5
ACTN4-210ENST00000588618 OR51J1Q9H342 316 aa18.2■□□□□ 0.5
ACTN4-210ENST00000588618 CDC42EP3Q9UKI2 254 aa18.2■□□□□ 0.5
ACTN4-210ENST00000588618 SHOXO15266 292 aa18.2■□□□□ 0.5
ACTN4-210ENST00000588618 IGKV1D-33P01593 117 aa18.2■□□□□ 0.5
ACTN4-210ENST00000588618 IGKV1-33P01594 117 aa18.2■□□□□ 0.5
ACTN4-210ENST00000588618 IGKV1-39P01597 117 aa18.2■□□□□ 0.5
ACTN4-210ENST00000588618 IGKV1-16P04430 117 aa18.2■□□□□ 0.5
ACTN4-210ENST00000588618 IGKV1D-39P04432 117 aa18.2■□□□□ 0.5
ACTN4-210ENST00000588618 FAM106CPP0CH98 169 aa18.2■□□□□ 0.5
ACTN4-210ENST00000588618 HABP2Q14520 560 aaPredicted RBP18.2■□□□□ 0.5
ACTN4-210ENST00000588618 TMEM268Q5VZI3 342 aa18.2■□□□□ 0.5
ACTN4-210ENST00000588618 CADM3Q8N126 398 aa18.2■□□□□ 0.5
ACTN4-210ENST00000588618 BCL6BQ8N143 479 aaPredicted RBP18.2■□□□□ 0.5
ACTN4-210ENST00000588618 RNASE11Q8TAA1 199 aaKnown RBP18.2■□□□□ 0.5
ACTN4-210ENST00000588618 RBPMSQ93062 196 aaKnown RBP18.2■□□□□ 0.5
ACTN4-210ENST00000588618 PLEKHA2Q9HB19 425 aa18.2■□□□□ 0.5
ACTN4-210ENST00000588618 S1PR2O95136 353 aa18.19■□□□□ 0.5
ACTN4-210ENST00000588618 VENTXO95231 258 aa18.19■□□□□ 0.5
ACTN4-210ENST00000588618 CDS2O95674 445 aa18.19■□□□□ 0.5
ACTN4-210ENST00000588618 ERVK-16P61578 105 aa18.19■□□□□ 0.5
ACTN4-210ENST00000588618 RPS16P62249 146 aaKnown RBP18.19■□□□□ 0.5
ACTN4-210ENST00000588618 C2orf68Q2NKX9 166 aa18.19■□□□□ 0.5
ACTN4-210ENST00000588618 DEFB112Q30KQ8 113 aa18.19■□□□□ 0.5
ACTN4-210ENST00000588618 Q71RC1 249 aaPredicted RBP18.19■□□□□ 0.5
ACTN4-210ENST00000588618 OSR1Q8TAX0 266 aaPredicted RBP18.19■□□□□ 0.5
ACTN4-210ENST00000588618 HARBI1Q96MB7 349 aa18.19■□□□□ 0.5
ACTN4-210ENST00000588618 SSX3Q99909 188 aa18.19■□□□□ 0.5
ACTN4-210ENST00000588618 AIFM2Q9BRQ8 373 aa18.19■□□□□ 0.5
ACTN4-210ENST00000588618 MTORP42345 2549 aa18.19■□□□□ 0.5
ACTN4-210ENST00000588618 HIVEP2P31629 2446 aa18.19■□□□□ 0.5
ACTN4-210ENST00000588618 HRASP01112 189 aa18.18■□□□□ 0.5
ACTN4-210ENST00000588618 SNRNP70P08621 437 aaKnown RBP18.18■□□□□ 0.5
ACTN4-210ENST00000588618 CD24P25063 80 aa18.18■□□□□ 0.5
ACTN4-210ENST00000588618 AKR1C2P52895 323 aa18.18■□□□□ 0.5
ACTN4-210ENST00000588618 LRRC75BQ2VPJ9 315 aa18.18■□□□□ 0.5
ACTN4-210ENST00000588618 FBLN7Q53RD9 439 aa18.18■□□□□ 0.5
ACTN4-210ENST00000588618 OR2T10Q8NGZ9 312 aa18.18■□□□□ 0.5
ACTN4-210ENST00000588618 IL22RA2Q969J5 263 aa18.18■□□□□ 0.5
ACTN4-210ENST00000588618 TMEM56Q96MV1 263 aa18.18■□□□□ 0.5
ACTN4-210ENST00000588618 TMEM56-RWDD3S4R434 201 aa18.18■□□□□ 0.5
ACTN4-210ENST00000588618 MOSP00540 346 aa18.18■□□□□ 0.5
ACTN4-210ENST00000588618 DMBX1Q8NFW5 382 aa18.18■□□□□ 0.5
ACTN4-210ENST00000588618 GSX1Q9H4S2 264 aaPredicted RBP18.18■□□□□ 0.5
ACTN4-210ENST00000588618 COMMD9Q9P000 198 aa18.18■□□□□ 0.5
ACTN4-210ENST00000588618 A0A0B4J2A0 478 aa18.17■□□□□ 0.5
ACTN4-210ENST00000588618 KRASP01116 189 aa18.17■□□□□ 0.5
ACTN4-210ENST00000588618 NQO2P16083 231 aa18.17■□□□□ 0.5
ACTN4-210ENST00000588618 SRD5A1P18405 259 aa18.17■□□□□ 0.5
ACTN4-210ENST00000588618 DYNLT3P51808 116 aa18.17■□□□□ 0.5
ACTN4-210ENST00000588618 HNF4GQ14541 408 aa18.17■□□□□ 0.5
ACTN4-210ENST00000588618 TMEM177Q53S58 311 aa18.17■□□□□ 0.5
ACTN4-210ENST00000588618 RRNAD1Q96FB5 475 aaKnown RBP18.17■□□□□ 0.5
ACTN4-210ENST00000588618 SHPKQ9UHJ6 478 aa18.17■□□□□ 0.5
ACTN4-210ENST00000588618 F8P00451 2351 aa18.16■□□□□ 0.5
ACTN4-210ENST00000588618 MDFIC2A0A1B0GVS7 189 aa18.16■□□□□ 0.5
ACTN4-210ENST00000588618 BTBD17A6NE02 478 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms