RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 OR56B1Q8NGI3 324 aa10.64□□□□□ -0.71
DNMT1-213ENST00000587604 GFI1Q99684 422 aa10.64□□□□□ -0.71
DNMT1-213ENST00000587604 NEURL2Q9BR09 285 aa10.64□□□□□ -0.71
DNMT1-213ENST00000587604 OR2D2Q9H210 308 aa10.64□□□□□ -0.71
DNMT1-213ENST00000587604 PLEKHA3Q9HB20 300 aa10.64□□□□□ -0.71
DNMT1-213ENST00000587604 LSM2Q9Y333 95 aaKnown RBP10.64□□□□□ -0.71
DNMT1-213ENST00000587604 ZNF785A8K8V0 405 aa10.63□□□□□ -0.71
DNMT1-213ENST00000587604 FABP7O15540 132 aa10.63□□□□□ -0.71
DNMT1-213ENST00000587604 DIRAS3O95661 229 aa10.63□□□□□ -0.71
DNMT1-213ENST00000587604 CD3GP09693 182 aa10.63□□□□□ -0.71
DNMT1-213ENST00000587604 UBE2KP61086 200 aa10.63□□□□□ -0.71
DNMT1-213ENST00000587604 RAB11BQ15907 218 aa10.63□□□□□ -0.71
DNMT1-213ENST00000587604 PRSS8Q16651 343 aa10.63□□□□□ -0.71
DNMT1-213ENST00000587604 VMA21Q3ZAQ7 101 aa10.63□□□□□ -0.71
DNMT1-213ENST00000587604 CD300EQ496F6 205 aaPredicted RBP10.63□□□□□ -0.71
DNMT1-213ENST00000587604 IGSF11Q5DX21 431 aa10.63□□□□□ -0.71
DNMT1-213ENST00000587604 OR10J5Q8NHC4 309 aa10.63□□□□□ -0.71
DNMT1-213ENST00000587604 TMEM203Q969S6 136 aa10.63□□□□□ -0.71
DNMT1-213ENST00000587604 FAM110AQ9BQ89 295 aa10.63□□□□□ -0.71
DNMT1-213ENST00000587604 AKIP1Q9NQ31 210 aa10.63□□□□□ -0.71
DNMT1-213ENST00000587604 SLC2A8Q9NY64 477 aa10.63□□□□□ -0.71
DNMT1-213ENST00000587604 AK6Q9Y3D8 172 aaKnown RBP10.63□□□□□ -0.71
DNMT1-213ENST00000587604 TRBV6-7A0A0A0MS04 114 aa10.62□□□□□ -0.71
DNMT1-213ENST00000587604 TRBV9A0A0B4J1U6 114 aa10.62□□□□□ -0.71
DNMT1-213ENST00000587604 RBMY1BA6NDE4 496 aaKnown RBP10.62□□□□□ -0.71
DNMT1-213ENST00000587604 RBMY1EA6NEQ0 496 aaKnown RBP10.62□□□□□ -0.71
DNMT1-213ENST00000587604 FAM223BA6NKX1 122 aa10.62□□□□□ -0.71
DNMT1-213ENST00000587604 PTGES3LE9PB15 166 aa10.62□□□□□ -0.71
DNMT1-213ENST00000587604 BMPR1BO00238 502 aa10.62□□□□□ -0.71
DNMT1-213ENST00000587604 BET1O15155 118 aa10.62□□□□□ -0.71
DNMT1-213ENST00000587604 RBMY1DP0C7P1 496 aaKnown RBP10.62□□□□□ -0.71
DNMT1-213ENST00000587604 GSTT2P0CG29 244 aa10.62□□□□□ -0.71
DNMT1-213ENST00000587604 GSTT2BP0CG30 244 aa10.62□□□□□ -0.71
DNMT1-213ENST00000587604 RANBP1P43487 201 aa10.62□□□□□ -0.71
DNMT1-213ENST00000587604 MRPS15P82914 257 aaKnown RBP10.62□□□□□ -0.71
DNMT1-213ENST00000587604 RHOGP84095 191 aa10.62□□□□□ -0.71
DNMT1-213ENST00000587604 ATP5G2Q06055 141 aa10.62□□□□□ -0.71
DNMT1-213ENST00000587604 TPBGQ13641 420 aa10.62□□□□□ -0.71
DNMT1-213ENST00000587604 PLECQ15149 4684 aaKnown RBP10.62□□□□□ -0.71
DNMT1-213ENST00000587604 MED22Q15528 200 aa10.62□□□□□ -0.71
DNMT1-213ENST00000587604 TNXAQ16473 311 aa10.62□□□□□ -0.71
DNMT1-213ENST00000587604 C2orf76Q3KRA6 126 aa10.62□□□□□ -0.71
DNMT1-213ENST00000587604 LIPKQ5VXJ0 399 aa10.62□□□□□ -0.71
DNMT1-213ENST00000587604 TMEM91Q6ZNR0 172 aa10.62□□□□□ -0.71
DNMT1-213ENST00000587604 FAM223AQ8IWN6 122 aa10.62□□□□□ -0.71
DNMT1-213ENST00000587604 SRSF12Q8WXF0 261 aaKnown RBP10.62□□□□□ -0.71
DNMT1-213ENST00000587604 UFD1Q92890 307 aa10.62□□□□□ -0.71
DNMT1-213ENST00000587604 FAM3DQ96BQ1 224 aa10.62□□□□□ -0.71
DNMT1-213ENST00000587604 C5orf30Q96GV9 206 aa10.62□□□□□ -0.71
DNMT1-213ENST00000587604 ADTRPQ96IZ2 230 aa10.62□□□□□ -0.71
DNMT1-213ENST00000587604 CABLES2Q9BTV7 478 aa10.62□□□□□ -0.71
DNMT1-213ENST00000587604 ZNF230Q9UIE0 474 aaPredicted RBP10.62□□□□□ -0.71
DNMT1-213ENST00000587604 KCNK7Q9Y2U2 307 aa10.62□□□□□ -0.71
DNMT1-213ENST00000587604 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.61□□□□□ -0.71
DNMT1-213ENST00000587604 MPPED1O15442 326 aa10.61□□□□□ -0.71
DNMT1-213ENST00000587604 DENRO43583 198 aaKnown RBP10.61□□□□□ -0.71
DNMT1-213ENST00000587604 ARL6IP5O75915 188 aa10.61□□□□□ -0.71
DNMT1-213ENST00000587604 CD7P09564 240 aa10.61□□□□□ -0.71
DNMT1-213ENST00000587604 CLDN12P56749 244 aa10.61□□□□□ -0.71
DNMT1-213ENST00000587604 ZNF45Q02386 682 aa10.61□□□□□ -0.71
DNMT1-213ENST00000587604 EXOSC2Q13868 293 aaKnown RBP10.61□□□□□ -0.71
DNMT1-213ENST00000587604 DEFB114Q30KQ6 69 aa10.61□□□□□ -0.71
DNMT1-213ENST00000587604 DEFB125Q8N687 156 aa10.61□□□□□ -0.71
DNMT1-213ENST00000587604 DDB2Q92466 427 aa10.61□□□□□ -0.71
DNMT1-213ENST00000587604 KCTD12Q96CX2 325 aaKnown RBP10.61□□□□□ -0.71
DNMT1-213ENST00000587604 RBM7Q9Y580 266 aaKnown RBP10.61□□□□□ -0.71
DNMT1-213ENST00000587604 OR11H12B2RN74 326 aa10.6□□□□□ -0.71
DNMT1-213ENST00000587604 EBAG9O00559 213 aa10.6□□□□□ -0.71
DNMT1-213ENST00000587604 TUSC2O75896 110 aa10.6□□□□□ -0.71
DNMT1-213ENST00000587604 ACTL6BO94805 426 aa10.6□□□□□ -0.71
DNMT1-213ENST00000587604 CRYZL1O95825 349 aa10.6□□□□□ -0.71
DNMT1-213ENST00000587604 PRH1P02810 166 aa10.6□□□□□ -0.71
DNMT1-213ENST00000587604 FCGR3AP08637 254 aa10.6□□□□□ -0.71
DNMT1-213ENST00000587604 DUTP33316 252 aaKnown RBP10.6□□□□□ -0.71
DNMT1-213ENST00000587604 KIR2DS2P43631 304 aa10.6□□□□□ -0.71
DNMT1-213ENST00000587604 TRAM1Q15629 374 aa10.6□□□□□ -0.71
DNMT1-213ENST00000587604 FAM209BQ5JX69 171 aa10.6□□□□□ -0.71
DNMT1-213ENST00000587604 IDO2Q6ZQW0 420 aa10.6□□□□□ -0.71
DNMT1-213ENST00000587604 TTC9CQ8N5M4 171 aa10.6□□□□□ -0.71
DNMT1-213ENST00000587604 NECAP1Q8NC96 275 aa10.6□□□□□ -0.71
DNMT1-213ENST00000587604 OSR1Q8TAX0 266 aaPredicted RBP10.6□□□□□ -0.71
DNMT1-213ENST00000587604 DYNLRB2Q8TF09 96 aa10.6□□□□□ -0.71
DNMT1-213ENST00000587604 ACOT12Q8WYK0 555 aa10.6□□□□□ -0.71
DNMT1-213ENST00000587604 RAB3CQ96E17 227 aa10.6□□□□□ -0.71
DNMT1-213ENST00000587604 SPIN2AQ99865 258 aa10.6□□□□□ -0.71
DNMT1-213ENST00000587604 SPIN2BQ9BPZ2 258 aa10.6□□□□□ -0.71
DNMT1-213ENST00000587604 CENPOQ9BU64 300 aa10.6□□□□□ -0.71
DNMT1-213ENST00000587604 RAB22AQ9UL26 194 aa10.6□□□□□ -0.71
DNMT1-213ENST00000587604 TMEM272A0A1B0GTI8 110 aa10.59□□□□□ -0.71
DNMT1-213ENST00000587604 ERICH4A6NGS2 130 aa10.59□□□□□ -0.71
DNMT1-213ENST00000587604 CREBL2O60519 120 aaPredicted RBP10.59□□□□□ -0.71
DNMT1-213ENST00000587604 FOLR2P14207 255 aa10.59□□□□□ -0.71
DNMT1-213ENST00000587604 PSMA1P25786 263 aaKnown RBP10.59□□□□□ -0.71
DNMT1-213ENST00000587604 PSMD7P51665 324 aa10.59□□□□□ -0.71
DNMT1-213ENST00000587604 IRF3Q14653 427 aa10.59□□□□□ -0.71
DNMT1-213ENST00000587604 RCN1Q15293 331 aa10.59□□□□□ -0.71
DNMT1-213ENST00000587604 OGFRL1Q5TC84 451 aaPredicted RBP10.59□□□□□ -0.71
DNMT1-213ENST00000587604 GINS4Q9BRT9 223 aa10.59□□□□□ -0.71
DNMT1-213ENST00000587604 ZNF430Q9H8G1 570 aaPredicted RBP10.59□□□□□ -0.71
DNMT1-213ENST00000587604 SRD5A3Q9H8P0 318 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms