RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 ZNF90Q03938 601 aa13.78□□□□□ -0.2
RANBP3-209ENST00000587411 WDR31Q8NA23 367 aa13.78□□□□□ -0.2
RANBP3-209ENST00000587411 QTRT1Q9BXR0 403 aaKnown RBP13.78□□□□□ -0.2
RANBP3-209ENST00000587411 DEPPQ9NTK1 212 aa13.78□□□□□ -0.2
RANBP3-209ENST00000587411 PGPEP1LA6NFU8 196 aa13.78□□□□□ -0.2
RANBP3-209ENST00000587411 C15orf62A8K5M9 175 aa13.78□□□□□ -0.2
RANBP3-209ENST00000587411 FOXG1P55316 489 aaPredicted RBP13.78□□□□□ -0.2
RANBP3-209ENST00000587411 Q0VG73 95 aa13.78□□□□□ -0.2
RANBP3-209ENST00000587411 TUSC5Q8IXB3 177 aa13.78□□□□□ -0.2
RANBP3-209ENST00000587411 SAP25Q8TEE9 199 aa13.78□□□□□ -0.2
RANBP3-209ENST00000587411 MRPL18Q9H0U6 180 aaKnown RBP13.78□□□□□ -0.2
RANBP3-209ENST00000587411 CABIN1Q9Y6J0 2220 aa13.78□□□□□ -0.2
RANBP3-209ENST00000587411 TMEM30CPA0ZSE6 113 aa13.77□□□□□ -0.2
RANBP3-209ENST00000587411 C17orf98A8MV24 154 aa13.77□□□□□ -0.2
RANBP3-209ENST00000587411 CXorf1O96002 111 aa13.77□□□□□ -0.2
RANBP3-209ENST00000587411 OPRK1P41145 380 aa13.77□□□□□ -0.2
RANBP3-209ENST00000587411 ARSJQ5FYB0 599 aaPredicted RBP13.77□□□□□ -0.2
RANBP3-209ENST00000587411 ZNF808Q8N4W9 903 aaPredicted RBP13.77□□□□□ -0.2
RANBP3-209ENST00000587411 C5orf30Q96GV9 206 aa13.77□□□□□ -0.2
RANBP3-209ENST00000587411 TMEM204Q9BSN7 226 aa13.77□□□□□ -0.2
RANBP3-209ENST00000587411 PAM16Q9Y3D7 125 aa13.77□□□□□ -0.2
RANBP3-209ENST00000587411 IL6RP08887 468 aaPredicted RBP13.77□□□□□ -0.21
RANBP3-209ENST00000587411 BMP5P22003 454 aa13.77□□□□□ -0.21
RANBP3-209ENST00000587411 CBLN1P23435 193 aa13.77□□□□□ -0.21
RANBP3-209ENST00000587411 EDDM3BP56851 147 aa13.77□□□□□ -0.21
RANBP3-209ENST00000587411 GCSAMLQ5JQS6 135 aa13.77□□□□□ -0.21
RANBP3-209ENST00000587411 APH1AQ96BI3 265 aa13.77□□□□□ -0.21
RANBP3-209ENST00000587411 BOKQ9UMX3 212 aaPredicted RBP13.77□□□□□ -0.21
RANBP3-209ENST00000587411 EYSQ5T1H1 3165 aa13.77□□□□□ -0.21
RANBP3-209ENST00000587411 TRBV9A0A0B4J1U6 114 aa13.77□□□□□ -0.21
RANBP3-209ENST00000587411 NEURL1O76050 574 aa13.77□□□□□ -0.21
RANBP3-209ENST00000587411 WISP2O76076 250 aa13.77□□□□□ -0.21
RANBP3-209ENST00000587411 NXPH2O95156 264 aa13.77□□□□□ -0.21
RANBP3-209ENST00000587411 STAG3L2P0CL84 134 aa13.77□□□□□ -0.21
RANBP3-209ENST00000587411 STAG3L3P0CL85 134 aa13.77□□□□□ -0.21
RANBP3-209ENST00000587411 BRWD1-AS2P59051 145 aa13.77□□□□□ -0.21
RANBP3-209ENST00000587411 RPP30P78346 268 aaKnown RBP13.77□□□□□ -0.21
RANBP3-209ENST00000587411 TDRG1Q3Y452 100 aa13.77□□□□□ -0.21
RANBP3-209ENST00000587411 COL5A1-AS1Q5SY13 56 aa13.77□□□□□ -0.21
RANBP3-209ENST00000587411 BAGE3Q86Y29 109 aa13.77□□□□□ -0.21
RANBP3-209ENST00000587411 BAGE2Q86Y30 109 aa13.77□□□□□ -0.21
RANBP3-209ENST00000587411 SPEM1Q8N4L4 309 aa13.77□□□□□ -0.21
RANBP3-209ENST00000587411 SCCPDHQ8NBX0 429 aa13.77□□□□□ -0.21
RANBP3-209ENST00000587411 OR4B1Q8NGF8 309 aa13.77□□□□□ -0.21
RANBP3-209ENST00000587411 CNTRLQ7Z7A1 2325 aa13.76□□□□□ -0.21
RANBP3-209ENST00000587411 ARL14EPLP0DKL9 152 aa13.76□□□□□ -0.21
RANBP3-209ENST00000587411 CD33P20138 364 aa13.76□□□□□ -0.21
RANBP3-209ENST00000587411 IGFBP7Q16270 282 aa13.76□□□□□ -0.21
RANBP3-209ENST00000587411 OCC1Q8TAD7 63 aa13.76□□□□□ -0.21
RANBP3-209ENST00000587411 VN1R17PQ8TDU5 208 aa13.76□□□□□ -0.21
RANBP3-209ENST00000587411 NINJ1Q92982 152 aa13.76□□□□□ -0.21
RANBP3-209ENST00000587411 SAMD10Q9BYL1 202 aa13.76□□□□□ -0.21
RANBP3-209ENST00000587411 LY96Q9Y6Y9 160 aa13.76□□□□□ -0.21
RANBP3-209ENST00000587411 SCO2A0A1W2PP80 73 aa13.76□□□□□ -0.21
RANBP3-209ENST00000587411 PINLYPA6NC86 204 aa13.76□□□□□ -0.21
RANBP3-209ENST00000587411 A8MXE2 369 aa13.76□□□□□ -0.21
RANBP3-209ENST00000587411 CYB561P49447 251 aa13.76□□□□□ -0.21
RANBP3-209ENST00000587411 MRPS11P82912 194 aaKnown RBP13.76□□□□□ -0.21
RANBP3-209ENST00000587411 ZNF703Q9H7S9 590 aaPredicted RBP13.76□□□□□ -0.21
RANBP3-209ENST00000587411 OOEPA6NGQ2 149 aa13.75□□□□□ -0.21
RANBP3-209ENST00000587411 C12orf77C9JDV5 145 aa13.75□□□□□ -0.21
RANBP3-209ENST00000587411 CDKN1AP38936 164 aa13.75□□□□□ -0.21
RANBP3-209ENST00000587411 SRYQ05066 204 aa13.75□□□□□ -0.21
RANBP3-209ENST00000587411 WDR86Q86TI4 376 aa13.75□□□□□ -0.21
RANBP3-209ENST00000587411 OR1L6Q8NGR2 347 aa13.75□□□□□ -0.21
RANBP3-209ENST00000587411 IFI44Q8TCB0 444 aa13.75□□□□□ -0.21
RANBP3-209ENST00000587411 SDK2Q58EX2 2172 aa13.75□□□□□ -0.21
RANBP3-209ENST00000587411 TGFBR3Q03167 851 aa13.75□□□□□ -0.21
RANBP3-209ENST00000587411 Q0VFX4 171 aa13.75□□□□□ -0.21
RANBP3-209ENST00000587411 TRA2AQ13595 282 aaKnown RBP eCLIP13.75□□□□□ -0.21
RANBP3-209ENST00000587411 NCKAP5O14513 1909 aa13.75□□□□□ -0.21
RANBP3-209ENST00000587411 LNP1A1A4G5 178 aa13.74□□□□□ -0.21
RANBP3-209ENST00000587411 LGALS4P56470 323 aa13.74□□□□□ -0.21
RANBP3-209ENST00000587411 PDLIM3Q53GG5 364 aaPredicted RBP13.74□□□□□ -0.21
RANBP3-209ENST00000587411 SPINK9Q5DT21 86 aa13.74□□□□□ -0.21
RANBP3-209ENST00000587411 SIGLECL1Q8N7X8 197 aa13.74□□□□□ -0.21
RANBP3-209ENST00000587411 OR52L2PQ8NGH6 319 aa13.74□□□□□ -0.21
RANBP3-209ENST00000587411 HSD17B10Q99714 261 aaKnown RBP13.74□□□□□ -0.21
RANBP3-209ENST00000587411 PHF7Q9BWX1 381 aaPredicted RBP13.74□□□□□ -0.21
RANBP3-209ENST00000587411 ZNF586Q9NXT0 402 aa13.74□□□□□ -0.21
RANBP3-209ENST00000587411 BRWD1Q9NSI6 2320 aa13.74□□□□□ -0.21
RANBP3-209ENST00000587411 ZNF407Q9C0G0 2248 aa13.74□□□□□ -0.21
RANBP3-209ENST00000587411 C9JCJ5 164 aa13.74□□□□□ -0.21
RANBP3-209ENST00000587411 FCN1O00602 326 aa13.74□□□□□ -0.21
RANBP3-209ENST00000587411 HAND1O96004 215 aa13.74□□□□□ -0.21
RANBP3-209ENST00000587411 MT-CO3P00414 261 aa13.74□□□□□ -0.21
RANBP3-209ENST00000587411 CCL4P13236 92 aa13.74□□□□□ -0.21
RANBP3-209ENST00000587411 COMPP49747 757 aaPredicted RBP13.74□□□□□ -0.21
RANBP3-209ENST00000587411 RPL19P84098 196 aaKnown RBP13.74□□□□□ -0.21
RANBP3-209ENST00000587411 AARDQ4LEZ3 155 aa13.74□□□□□ -0.21
RANBP3-209ENST00000587411 SLC35E4Q6ICL7 350 aa13.74□□□□□ -0.21
RANBP3-209ENST00000587411 PPP1R32Q7Z5V6 425 aa13.74□□□□□ -0.21
RANBP3-209ENST00000587411 RNF2Q99496 336 aa13.74□□□□□ -0.21
RANBP3-209ENST00000587411 ZFP30Q9Y2G7 519 aa13.74□□□□□ -0.21
RANBP3-209ENST00000587411 J3QW42 95 aa13.73□□□□□ -0.21
RANBP3-209ENST00000587411 HBZP02008 142 aa13.73□□□□□ -0.21
RANBP3-209ENST00000587411 SELEP16581 610 aa13.73□□□□□ -0.21
RANBP3-209ENST00000587411 THBS3P49746 956 aa13.73□□□□□ -0.21
RANBP3-209ENST00000587411 CLDN18P56856 261 aa13.73□□□□□ -0.21
RANBP3-209ENST00000587411 ZNF718Q3SXZ3 478 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms