RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 CTSDP07339 412 aaPredicted RBP11.65□□□□□ -0.54
SCAMP4-209ENST00000585335 LGALS7P47929 136 aa11.65□□□□□ -0.54
SCAMP4-209ENST00000585335 RND3P61587 244 aa11.65□□□□□ -0.54
SCAMP4-209ENST00000585335 EIF4EBP1Q13541 118 aaPredicted RBP11.65□□□□□ -0.54
SCAMP4-209ENST00000585335 PLGLAQ15195 96 aa11.65□□□□□ -0.54
SCAMP4-209ENST00000585335 OR2B11Q5JQS5 317 aa11.65□□□□□ -0.54
SCAMP4-209ENST00000585335 SPAG16Q8N0X2 631 aa11.65□□□□□ -0.54
SCAMP4-209ENST00000585335 OR4F5Q8NH21 305 aa11.65□□□□□ -0.54
SCAMP4-209ENST00000585335 OSR1Q8TAX0 266 aaPredicted RBP11.65□□□□□ -0.54
SCAMP4-209ENST00000585335 HARBI1Q96MB7 349 aa11.65□□□□□ -0.54
SCAMP4-209ENST00000585335 RASL11BQ9BPW5 248 aa11.65□□□□□ -0.54
SCAMP4-209ENST00000585335 SLC25A21Q9BQT8 299 aaPredicted RBP11.65□□□□□ -0.54
SCAMP4-209ENST00000585335 AIFM2Q9BRQ8 373 aa11.65□□□□□ -0.54
SCAMP4-209ENST00000585335 PRSS22Q9GZN4 317 aa11.65□□□□□ -0.54
SCAMP4-209ENST00000585335 SLC2A9Q9NRM0 540 aa11.65□□□□□ -0.54
SCAMP4-209ENST00000585335 JMJD1CQ15652 2540 aa11.65□□□□□ -0.54
SCAMP4-209ENST00000585335 SETD2Q9BYW2 2564 aaPredicted RBP11.65□□□□□ -0.55
SCAMP4-209ENST00000585335 RBFOX2O43251 390 aaKnown RBP eCLIP11.64□□□□□ -0.555e-7■■□□□ 13.9
SCAMP4-209ENST00000585335 NDUFA7O95182 113 aa11.64□□□□□ -0.55
SCAMP4-209ENST00000585335 IGKV1-16P04430 117 aa11.64□□□□□ -0.55
SCAMP4-209ENST00000585335 RAG2P55895 527 aa11.64□□□□□ -0.55
SCAMP4-209ENST00000585335 PIGPP57054 158 aa11.64□□□□□ -0.55
SCAMP4-209ENST00000585335 LINC00205P59089 165 aa11.64□□□□□ -0.55
SCAMP4-209ENST00000585335 RPL30P62888 115 aaKnown RBP11.64□□□□□ -0.55
SCAMP4-209ENST00000585335 RBMS2Q15434 407 aaKnown RBP11.64□□□□□ -0.55
SCAMP4-209ENST00000585335 TMEM177Q53S58 311 aa11.64□□□□□ -0.55
SCAMP4-209ENST00000585335 C11orf88Q6PI97 169 aa11.64□□□□□ -0.55
SCAMP4-209ENST00000585335 TBC1D26Q86UD7 250 aa11.64□□□□□ -0.55
SCAMP4-209ENST00000585335 C2CD3Q4AC94 2353 aa11.64□□□□□ -0.55
SCAMP4-209ENST00000585335 NF1P21359 2839 aa11.63□□□□□ -0.55
SCAMP4-209ENST00000585335 LYRM1O43325 122 aa11.63□□□□□ -0.55
SCAMP4-209ENST00000585335 PEX14O75381 377 aa11.63□□□□□ -0.55
SCAMP4-209ENST00000585335 B3GALNT1O75752 331 aa11.63□□□□□ -0.55
SCAMP4-209ENST00000585335 UPK1BO75841 260 aa11.63□□□□□ -0.55
SCAMP4-209ENST00000585335 HRASP01112 189 aa11.63□□□□□ -0.55
SCAMP4-209ENST00000585335 HKR1P10072 659 aa11.63□□□□□ -0.55
SCAMP4-209ENST00000585335 PI3P19957 117 aa11.63□□□□□ -0.55
SCAMP4-209ENST00000585335 F2RP25116 425 aa11.63□□□□□ -0.55
SCAMP4-209ENST00000585335 VMA21Q3ZAQ7 101 aa11.63□□□□□ -0.55
SCAMP4-209ENST00000585335 C9orf152Q5JTZ5 239 aa11.63□□□□□ -0.55
SCAMP4-209ENST00000585335 MZT2BQ6NZ67 158 aa11.63□□□□□ -0.55
SCAMP4-209ENST00000585335 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.63□□□□□ -0.55
SCAMP4-209ENST00000585335 C5orf56Q8N8D9 126 aa11.63□□□□□ -0.55
SCAMP4-209ENST00000585335 NPBQ8NG41 125 aa11.63□□□□□ -0.55
SCAMP4-209ENST00000585335 OR2T6Q8NHC8 308 aa11.63□□□□□ -0.55
SCAMP4-209ENST00000585335 GPHA2Q96T91 129 aa11.63□□□□□ -0.55
SCAMP4-209ENST00000585335 TSC22D3Q99576 134 aa11.63□□□□□ -0.55
SCAMP4-209ENST00000585335 TEX13DA0A0J9YY54 714 aaPredicted RBP11.62□□□□□ -0.55
SCAMP4-209ENST00000585335 A0A1B0GUS0 222 aa11.62□□□□□ -0.55
SCAMP4-209ENST00000585335 RRHO14718 337 aa11.62□□□□□ -0.55
SCAMP4-209ENST00000585335 MPPED1O15442 326 aa11.62□□□□□ -0.55
SCAMP4-209ENST00000585335 TSPAN9O75954 239 aa11.62□□□□□ -0.55
SCAMP4-209ENST00000585335 NDUFA3O95167 84 aa11.62□□□□□ -0.55
SCAMP4-209ENST00000585335 SERPINE2P07093 398 aa11.62□□□□□ -0.55
SCAMP4-209ENST00000585335 F2RL1P55085 397 aa11.62□□□□□ -0.55
SCAMP4-209ENST00000585335 FOXL1Q12952 345 aa11.62□□□□□ -0.55
SCAMP4-209ENST00000585335 KRTAP24-1Q3LI83 254 aa11.62□□□□□ -0.55
SCAMP4-209ENST00000585335 FBLN7Q53RD9 439 aa11.62□□□□□ -0.55
SCAMP4-209ENST00000585335 Q8N9W7 124 aa11.62□□□□□ -0.55
SCAMP4-209ENST00000585335 C19orf24Q9BVV8 132 aa11.62□□□□□ -0.55
SCAMP4-209ENST00000585335 BEX1Q9HBH7 125 aa11.62□□□□□ -0.55
SCAMP4-209ENST00000585335 FAM212BQ9NTI7 297 aaPredicted RBP11.62□□□□□ -0.55
SCAMP4-209ENST00000585335 METTL1Q9UBP6 276 aaKnown RBP11.62□□□□□ -0.55
SCAMP4-209ENST00000585335 GPR132Q9UNW8 380 aa11.62□□□□□ -0.55
SCAMP4-209ENST00000585335 H0Y980 276 aa11.61□□□□□ -0.55
SCAMP4-209ENST00000585335 KCNAB3O43448 404 aa11.61□□□□□ -0.55
SCAMP4-209ENST00000585335 CREBL2O60519 120 aaPredicted RBP11.61□□□□□ -0.55
SCAMP4-209ENST00000585335 HPRT1P00492 218 aa11.61□□□□□ -0.55
SCAMP4-209ENST00000585335 TAS2R31P59538 309 aa11.61□□□□□ -0.55
SCAMP4-209ENST00000585335 DEFA1P59665 94 aa11.61□□□□□ -0.55
SCAMP4-209ENST00000585335 DEFA3P59666 94 aa11.61□□□□□ -0.55
SCAMP4-209ENST00000585335 ERVK-16P61578 105 aa11.61□□□□□ -0.55
SCAMP4-209ENST00000585335 PSG5Q15238 335 aa11.61□□□□□ -0.55
SCAMP4-209ENST00000585335 C5orf64Q2M2E5 130 aa11.61□□□□□ -0.55
SCAMP4-209ENST00000585335 Q6ZSV7 163 aa11.61□□□□□ -0.55
SCAMP4-209ENST00000585335 SGPP2Q8IWX5 399 aa11.61□□□□□ -0.55
SCAMP4-209ENST00000585335 FAM71E2Q8N5Q1 922 aa11.61□□□□□ -0.55
SCAMP4-209ENST00000585335 VSTM2AQ8TAG5 236 aa11.61□□□□□ -0.55
SCAMP4-209ENST00000585335 MRGPRFQ96AM1 343 aa11.61□□□□□ -0.55
SCAMP4-209ENST00000585335 C16orf95Q9H693 158 aa11.61□□□□□ -0.55
SCAMP4-209ENST00000585335 PLEKHA2Q9HB19 425 aa11.61□□□□□ -0.55
SCAMP4-209ENST00000585335 PLSCR3Q9NRY6 295 aa11.61□□□□□ -0.55
SCAMP4-209ENST00000585335 COMMD9Q9P000 198 aa11.61□□□□□ -0.55
SCAMP4-209ENST00000585335 C3orf85A0A1B0GTC6 90 aa11.6□□□□□ -0.55
SCAMP4-209ENST00000585335 SLC25A17O43808 307 aa11.6□□□□□ -0.55
SCAMP4-209ENST00000585335 ATG12O94817 140 aa11.6□□□□□ -0.55
SCAMP4-209ENST00000585335 NDUFB6O95139 128 aa11.6□□□□□ -0.55
SCAMP4-209ENST00000585335 CNTFRP26992 372 aa11.6□□□□□ -0.55
SCAMP4-209ENST00000585335 VDAC2P45880 294 aaPredicted RBP11.6□□□□□ -0.55
SCAMP4-209ENST00000585335 CCR6P51684 374 aa11.6□□□□□ -0.55
SCAMP4-209ENST00000585335 UBE2KP61086 200 aa11.6□□□□□ -0.55
SCAMP4-209ENST00000585335 BLCAPP62952 87 aa11.6□□□□□ -0.55
SCAMP4-209ENST00000585335 ASAH1Q13510 395 aa11.6□□□□□ -0.55
SCAMP4-209ENST00000585335 LIN54Q6MZP7 749 aa11.6□□□□□ -0.55
SCAMP4-209ENST00000585335 TMED4Q7Z7H5 227 aa11.6□□□□□ -0.55
SCAMP4-209ENST00000585335 RITA1Q96K30 269 aa11.6□□□□□ -0.55
SCAMP4-209ENST00000585335 RTBDNQ9BSG5 229 aaPredicted RBP11.6□□□□□ -0.55
SCAMP4-209ENST00000585335 FBXL15Q9H469 300 aa11.6□□□□□ -0.55
SCAMP4-209ENST00000585335 C5orf66Q9H5L9 145 aa11.6□□□□□ -0.55
SCAMP4-209ENST00000585335 VSIG4Q9Y279 399 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms