RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 CST11Q9H112 138 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 EDA2RQ9HAV5 297 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 CALYQ9NYX4 217 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 HHLA2Q9UM44 414 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 ERGIC3Q9Y282 383 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 SCN3AQ9NY46 2000 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 HYDINQ4G0P3 5121 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 POLQO75417 2590 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 FN1P02751 2386 aaKnown RBP1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 PRRC2AP48634 2157 aaKnown RBP1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 TRAV8-7A0A075B6U6 113 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 TRBV6-6A0A0A6YYG2 114 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 IGHV3-20A0A0C4DH32 117 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 H0YHG0 523 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 H3BUA1 57 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 J3QT63 122 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 SULT1B1O43704 296 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 DHRS3O75911 302 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 KBTBD11O94819 623 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 ATP6V1G2O95670 118 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 PPP1R3DO95685 299 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 PATE4P0C8F1 98 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 GNB3P16520 340 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 USF1P22415 310 aaPredicted RBP1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 PYCR1P32322 319 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 VHLP40337 213 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 GPR6P46095 362 aaPredicted RBP1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 ACTBP60709 375 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 PPP1CBP62140 327 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 ACTG1P63261 375 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 RSU1Q15404 277 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 CEACAM16Q2WEN9 425 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 NSUN5P1Q3KNT7 163 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 C11orf71Q6IPW1 123 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 Q6ZS49 121 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 HS3ST5Q8IZT8 346 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 MUC15Q8N387 334 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 ACBD7Q8N6N7 88 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 SLC26A10Q8NG04 563 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 ERMAPQ96PL5 475 aaPredicted RBP1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 DOK1Q99704 481 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 TSSK6Q9BXA6 273 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 PECRQ9BY49 303 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 NAA50Q9GZZ1 169 aaKnown RBP1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 CYB5R1Q9UHQ9 305 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 POMPQ9Y244 141 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 CBY1Q9Y3M2 126 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 V9GYS6 101 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 EPPK1P58107 5090 aaKnown RBP1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 CELSR2Q9HCU4 2923 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 CACNA1DQ01668 2161 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 RYR2Q92736 4967 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 A0A087WUU8 490 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 IGLV1-36A0A0B4J1U3 117 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 TRAV1-2A0A0B4J238 106 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 A0A0G2JMP0 313 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 A0A0G2JN53 185 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 A0A0X1KG70 313 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 GGT3PA6NGU5 568 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 ZNF850A8MQ14 1090 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 E9PQ18 207 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 H7C423 109 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 BHLHE40O14503 412 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 TOR1AO14656 332 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 TCAPO15273 167 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 ORC5O43913 435 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 GABARAPO95166 117 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 HLA-DPB1P04440 258 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 EIF4EP06730 217 aaKnown RBP1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 HTR1AP08908 422 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 MMP7P09237 267 aaPredicted RBP1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 OR5H8P0DN80 308 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 RAB3BP20337 219 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 IGHV1-2P23083 117 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 CD34P28906 385 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 BRS3P32247 399 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 TAS2R46P59540 309 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 PAX2Q02962 417 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 ST3GAL4Q11206 333 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 CDK10Q15131 360 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 BCL2L15Q5TBC7 163 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 PVRIGQ6DKI7 326 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 AHSA2Q719I0 299 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 SKA3Q8IX90 412 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 ZFP41Q8N8Y5 198 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 GPR32P1Q8NGA4 272 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 OR4M2Q8NGB6 313 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 OR6T1Q8NGN1 323 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 OR13D1Q8NGV5 346 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 OR52E5Q8NH55 327 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 RPS4Y2Q8TD47 263 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 NRGNQ92686 78 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 TAF15Q92804 592 aaKnown RBP eCLIP1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 SLC25A38Q96DW6 304 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 ZNF275Q9NSD4 429 aaPredicted RBP1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 TAS2R8Q9NYW2 309 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 TAS2R5Q9NYW4 299 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 TAS2R1Q9NYW7 299 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 KIF25Q9UIL4 384 aa1.49□□□□□ -2.17
SMCHD1-211ENST00000584897 ST3GAL6Q9Y274 331 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms