RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 MMP9P14780 707 aa11.36□□□□□ -0.59
UBBP4-202ENST00000584755 ARHGDIBP52566 201 aa11.36□□□□□ -0.59
UBBP4-202ENST00000584755 ZNF345Q14585 488 aa11.36□□□□□ -0.59
UBBP4-202ENST00000584755 POU2AF1Q16633 256 aa11.36□□□□□ -0.59
UBBP4-202ENST00000584755 CLEC12BQ2HXU8 276 aa11.36□□□□□ -0.59
UBBP4-202ENST00000584755 DEFB113Q30KQ7 82 aa11.36□□□□□ -0.59
UBBP4-202ENST00000584755 MIDNQ504T8 468 aa11.36□□□□□ -0.59
UBBP4-202ENST00000584755 DHRS7BQ6IAN0 325 aaPredicted RBP11.36□□□□□ -0.59
UBBP4-202ENST00000584755 PNKDQ8N490 385 aa11.36□□□□□ -0.59
UBBP4-202ENST00000584755 FAM71E2Q8N5Q1 922 aa11.36□□□□□ -0.59
UBBP4-202ENST00000584755 OR1S1Q8NH92 325 aa11.36□□□□□ -0.59
UBBP4-202ENST00000584755 R3HDM4Q96D70 268 aa11.36□□□□□ -0.59
UBBP4-202ENST00000584755 CACNG5Q9UF02 275 aa11.36□□□□□ -0.59
UBBP4-202ENST00000584755 AMMECR1Q9Y4X0 333 aaPredicted RBP11.36□□□□□ -0.59
UBBP4-202ENST00000584755 ANKRD17O75179 2603 aaKnown RBP11.35□□□□□ -0.59
UBBP4-202ENST00000584755 NBPF19A0A087WUL8 3843 aa11.35□□□□□ -0.59
UBBP4-202ENST00000584755 A0A096LNT2 108 aa11.35□□□□□ -0.59
UBBP4-202ENST00000584755 RNF222A6NCQ9 220 aa11.35□□□□□ -0.59
UBBP4-202ENST00000584755 MARCH11A6NNE9 402 aa11.35□□□□□ -0.59
UBBP4-202ENST00000584755 H0YJW9 148 aa11.35□□□□□ -0.59
UBBP4-202ENST00000584755 OR2F2O95006 317 aa11.35□□□□□ -0.59
UBBP4-202ENST00000584755 RRASP10301 218 aa11.35□□□□□ -0.59
UBBP4-202ENST00000584755 NQO2P16083 231 aa11.35□□□□□ -0.59
UBBP4-202ENST00000584755 COX7A1P24310 79 aa11.35□□□□□ -0.59
UBBP4-202ENST00000584755 G6PCP35575 357 aa11.35□□□□□ -0.59
UBBP4-202ENST00000584755 NKX2-1P43699 371 aaPredicted RBP11.35□□□□□ -0.59
UBBP4-202ENST00000584755 S100A10P60903 97 aa11.35□□□□□ -0.59
UBBP4-202ENST00000584755 OR2F1Q13607 317 aa11.35□□□□□ -0.59
UBBP4-202ENST00000584755 DIAPH2-AS1Q14236 149 aa11.35□□□□□ -0.59
UBBP4-202ENST00000584755 IZUMO4Q1ZYL8 232 aa11.35□□□□□ -0.59
UBBP4-202ENST00000584755 RNASE11Q8TAA1 199 aaKnown RBP11.35□□□□□ -0.59
UBBP4-202ENST00000584755 C1orf159Q96HA4 380 aa11.35□□□□□ -0.59
UBBP4-202ENST00000584755 MFFQ9GZY8 342 aa11.35□□□□□ -0.59
UBBP4-202ENST00000584755 SIRT7Q9NRC8 400 aa11.35□□□□□ -0.59
UBBP4-202ENST00000584755 RCL1Q9Y2P8 373 aaKnown RBP11.35□□□□□ -0.59
UBBP4-202ENST00000584755 ABCA12Q86UK0 2595 aa11.35□□□□□ -0.59
UBBP4-202ENST00000584755 ABCA2Q9BZC7 2435 aa11.34□□□□□ -0.59
UBBP4-202ENST00000584755 VPS13CQ709C8 3753 aa11.34□□□□□ -0.59
UBBP4-202ENST00000584755 FAM90A26D6RGX4 464 aa11.34□□□□□ -0.59
UBBP4-202ENST00000584755 L7N2F9 121 aa11.34□□□□□ -0.59
UBBP4-202ENST00000584755 TXNL1O43396 289 aa11.34□□□□□ -0.59
UBBP4-202ENST00000584755 SCGB1D2O95969 90 aa11.34□□□□□ -0.59
UBBP4-202ENST00000584755 RLN2P04090 185 aa11.34□□□□□ -0.59
UBBP4-202ENST00000584755 EPHA1P21709 976 aa11.34□□□□□ -0.59
UBBP4-202ENST00000584755 DVL1P1P54792 670 aaPredicted RBP11.34□□□□□ -0.59
UBBP4-202ENST00000584755 RTL8BQ17RB0 113 aa11.34□□□□□ -0.59
UBBP4-202ENST00000584755 AARDQ4LEZ3 155 aa11.34□□□□□ -0.59
UBBP4-202ENST00000584755 CXorf66Q5JRM2 361 aaPredicted RBP11.34□□□□□ -0.59
UBBP4-202ENST00000584755 ACOT7LQ6ZUV0 252 aa11.34□□□□□ -0.59
UBBP4-202ENST00000584755 VMO1Q7Z5L0 202 aa11.34□□□□□ -0.59
UBBP4-202ENST00000584755 TGIF2LXQ8IUE1 241 aa11.34□□□□□ -0.59
UBBP4-202ENST00000584755 KCNRGQ8N5I3 272 aa11.34□□□□□ -0.59
UBBP4-202ENST00000584755 DMBX1Q8NFW5 382 aa11.34□□□□□ -0.59
UBBP4-202ENST00000584755 SLC35D1Q9NTN3 355 aa11.34□□□□□ -0.59
UBBP4-202ENST00000584755 LSM5Q9Y4Y9 91 aaKnown RBP11.34□□□□□ -0.59
UBBP4-202ENST00000584755 INSIG2Q9Y5U4 225 aa11.34□□□□□ -0.59
UBBP4-202ENST00000584755 POLQO75417 2590 aa11.34□□□□□ -0.59
UBBP4-202ENST00000584755 GCN1Q92616 2671 aaKnown RBP11.33□□□□□ -0.6
UBBP4-202ENST00000584755 APCP25054 2843 aa11.33□□□□□ -0.6
UBBP4-202ENST00000584755 A0A0D9SG52 128 aa11.33□□□□□ -0.6
UBBP4-202ENST00000584755 E5RGE8 158 aa11.33□□□□□ -0.6
UBBP4-202ENST00000584755 CRYZL1O95825 349 aa11.33□□□□□ -0.6
UBBP4-202ENST00000584755 APOA2P02652 100 aa11.33□□□□□ -0.6
UBBP4-202ENST00000584755 HOXB4P17483 251 aaPredicted RBP11.33□□□□□ -0.6
UBBP4-202ENST00000584755 USF1P22415 310 aaPredicted RBP11.33□□□□□ -0.6
UBBP4-202ENST00000584755 IFITM2Q01629 132 aa11.33□□□□□ -0.6
UBBP4-202ENST00000584755 PRB3Q04118 309 aaPredicted RBP11.33□□□□□ -0.6
UBBP4-202ENST00000584755 PAX8Q06710 450 aa11.33□□□□□ -0.6
UBBP4-202ENST00000584755 TMEM177Q53S58 311 aa11.33□□□□□ -0.6
UBBP4-202ENST00000584755 TMUB2Q71RG4 321 aa11.33□□□□□ -0.6
UBBP4-202ENST00000584755 H2BFWTQ7Z2G1 175 aa11.33□□□□□ -0.6
UBBP4-202ENST00000584755 PDPNQ86YL7 162 aa11.33□□□□□ -0.6
UBBP4-202ENST00000584755 DCUN1D4Q92564 292 aa11.33□□□□□ -0.6
UBBP4-202ENST00000584755 AQP10Q96PS8 301 aa11.33□□□□□ -0.6
UBBP4-202ENST00000584755 TBX15Q96SF7 602 aa11.33□□□□□ -0.6
UBBP4-202ENST00000584755 GON7Q9BXV9 100 aa11.33□□□□□ -0.6
UBBP4-202ENST00000584755 ASH1LQ9NR48 2969 aaKnown RBP11.33□□□□□ -0.6
UBBP4-202ENST00000584755 NSG2Q9Y328 171 aa11.33□□□□□ -0.6
UBBP4-202ENST00000584755 NAV2Q8IVL1 2488 aa11.32□□□□□ -0.6
UBBP4-202ENST00000584755 RNASEK-C17orf49H0YIS7 233 aa11.32□□□□□ -0.6
UBBP4-202ENST00000584755 GAPDHP04406 335 aaKnown RBP11.32□□□□□ -0.6
UBBP4-202ENST00000584755 IGKV1-16P04430 117 aa11.32□□□□□ -0.6
UBBP4-202ENST00000584755 IL6RP08887 468 aaPredicted RBP11.32□□□□□ -0.6
UBBP4-202ENST00000584755 C4BPBP20851 252 aa11.32□□□□□ -0.6
UBBP4-202ENST00000584755 S100A11P31949 105 aa11.32□□□□□ -0.6
UBBP4-202ENST00000584755 REG1BP48304 166 aa11.32□□□□□ -0.6
UBBP4-202ENST00000584755 POLR2GP62487 172 aaKnown RBP eCLIP11.32□□□□□ -0.6
UBBP4-202ENST00000584755 KLRD1Q13241 179 aa11.32□□□□□ -0.6
UBBP4-202ENST00000584755 LDLRAD2Q5SZI1 272 aa11.32□□□□□ -0.6
UBBP4-202ENST00000584755 INO80EQ8NBZ0 244 aaPredicted RBP11.32□□□□□ -0.6
UBBP4-202ENST00000584755 OSR1Q8TAX0 266 aaPredicted RBP11.32□□□□□ -0.6
UBBP4-202ENST00000584755 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.32□□□□□ -0.6
UBBP4-202ENST00000584755 LEUTXA8MZ59 168 aa11.32□□□□□ -0.6
UBBP4-202ENST00000584755 TOX4O94842 621 aa11.32□□□□□ -0.6
UBBP4-202ENST00000584755 HRASP01112 189 aa11.32□□□□□ -0.6
UBBP4-202ENST00000584755 ARG1P05089 322 aa11.32□□□□□ -0.6
UBBP4-202ENST00000584755 HTR1DP28221 377 aa11.32□□□□□ -0.6
UBBP4-202ENST00000584755 MC5RP33032 325 aa11.32□□□□□ -0.6
UBBP4-202ENST00000584755 RAB13P51153 203 aa11.32□□□□□ -0.6
UBBP4-202ENST00000584755 ERVK-16P61578 105 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms