RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 SCOCQ9UIL1 159 aa8.6□□□□□ -1.03
CCDC47-206ENST00000584112 GAB2Q9UQC2 676 aa8.6□□□□□ -1.03
CCDC47-206ENST00000584112 ZNF256Q9Y2P7 627 aaPredicted RBP8.6□□□□□ -1.03
CCDC47-206ENST00000584112 KCNK7Q9Y2U2 307 aa8.6□□□□□ -1.03
CCDC47-206ENST00000584112 TRBV6-7A0A0A0MS04 114 aa8.59□□□□□ -1.03
CCDC47-206ENST00000584112 SHISA3A0PJX4 238 aa8.59□□□□□ -1.03
CCDC47-206ENST00000584112 RAB27BO00194 218 aa8.59□□□□□ -1.03
CCDC47-206ENST00000584112 ARPC1BO15143 372 aaKnown RBP8.59□□□□□ -1.03
CCDC47-206ENST00000584112 SLC25A17O43808 307 aa8.59□□□□□ -1.03
CCDC47-206ENST00000584112 OR8U9P0C7N5 309 aa8.59□□□□□ -1.03
CCDC47-206ENST00000584112 EGR2P11161 476 aaPredicted RBP8.59□□□□□ -1.03
CCDC47-206ENST00000584112 GNB3P16520 340 aa8.59□□□□□ -1.03
CCDC47-206ENST00000584112 LGALS7P47929 136 aa8.59□□□□□ -1.03
CCDC47-206ENST00000584112 TPPP2P59282 170 aa8.59□□□□□ -1.03
CCDC47-206ENST00000584112 PLA2G7Q13093 441 aa8.59□□□□□ -1.03
CCDC47-206ENST00000584112 SRSF7Q16629 238 aaKnown RBP eCLIP8.59□□□□□ -1.03
CCDC47-206ENST00000584112 RTL8BQ17RB0 113 aa8.59□□□□□ -1.03
CCDC47-206ENST00000584112 IGSF11Q5DX21 431 aa8.59□□□□□ -1.03
CCDC47-206ENST00000584112 UBE2UQ5VVX9 321 aa8.59□□□□□ -1.03
CCDC47-206ENST00000584112 C22orf42Q6IC83 251 aa8.59□□□□□ -1.03
CCDC47-206ENST00000584112 Q6ZS49 121 aa8.59□□□□□ -1.03
CCDC47-206ENST00000584112 LFNGQ8NES3 379 aa8.59□□□□□ -1.03
CCDC47-206ENST00000584112 DCUN1D4Q92564 292 aa8.59□□□□□ -1.03
CCDC47-206ENST00000584112 FCGR1BQ92637 280 aa8.59□□□□□ -1.03
CCDC47-206ENST00000584112 GINS4Q9BRT9 223 aa8.59□□□□□ -1.03
CCDC47-206ENST00000584112 FAM103A1Q9BTL3 118 aaKnown RBP8.59□□□□□ -1.03
CCDC47-206ENST00000584112 RBM7Q9Y580 266 aaKnown RBP8.59□□□□□ -1.03
CCDC47-206ENST00000584112 H3BUA1 57 aa8.58□□□□□ -1.04
CCDC47-206ENST00000584112 SCGNO76038 276 aa8.58□□□□□ -1.04
CCDC47-206ENST00000584112 CNIH1O95406 144 aa8.58□□□□□ -1.04
CCDC47-206ENST00000584112 LY86O95711 162 aa8.58□□□□□ -1.04
CCDC47-206ENST00000584112 GSTT2P0CG29 244 aa8.58□□□□□ -1.04
CCDC47-206ENST00000584112 GSTT2BP0CG30 244 aa8.58□□□□□ -1.04
CCDC47-206ENST00000584112 RRASP10301 218 aa8.58□□□□□ -1.04
CCDC47-206ENST00000584112 DTYMKP23919 212 aa8.58□□□□□ -1.04
CCDC47-206ENST00000584112 FGF9P31371 208 aaPredicted RBP8.58□□□□□ -1.04
CCDC47-206ENST00000584112 LINC00205P59089 165 aa8.58□□□□□ -1.04
CCDC47-206ENST00000584112 FXYD3Q14802 87 aa8.58□□□□□ -1.04
CCDC47-206ENST00000584112 GRPEL2Q8TAA5 225 aa8.58□□□□□ -1.04
CCDC47-206ENST00000584112 CASTOR1Q8WTX7 329 aa8.58□□□□□ -1.04
CCDC47-206ENST00000584112 ADTRPQ96IZ2 230 aa8.58□□□□□ -1.04
CCDC47-206ENST00000584112 HARBI1Q96MB7 349 aa8.58□□□□□ -1.04
CCDC47-206ENST00000584112 ALX4Q9H161 411 aaPredicted RBP8.58□□□□□ -1.04
CCDC47-206ENST00000584112 ATG5Q9H1Y0 275 aa8.58□□□□□ -1.04
CCDC47-206ENST00000584112 SDHAF2Q9NX18 166 aa8.58□□□□□ -1.04
CCDC47-206ENST00000584112 ZNF230Q9UIE0 474 aaPredicted RBP8.58□□□□□ -1.04
CCDC47-206ENST00000584112 NOTOA8MTQ0 251 aa8.57□□□□□ -1.04
CCDC47-206ENST00000584112 SHOXO15266 292 aa8.57□□□□□ -1.04
CCDC47-206ENST00000584112 SAP30O75446 220 aa8.57□□□□□ -1.04
CCDC47-206ENST00000584112 ATP6V1G2O95670 118 aa8.57□□□□□ -1.04
CCDC47-206ENST00000584112 IGHV3-11P01762 117 aa8.57□□□□□ -1.04
CCDC47-206ENST00000584112 TRGV3P03979 118 aa8.57□□□□□ -1.04
CCDC47-206ENST00000584112 HSPB1P04792 205 aaKnown RBP8.57□□□□□ -1.04
CCDC47-206ENST00000584112 PSMB9P28065 219 aa8.57□□□□□ -1.04
CCDC47-206ENST00000584112 SLURP1P55000 103 aa8.57□□□□□ -1.04
CCDC47-206ENST00000584112 TMEM177Q53S58 311 aa8.57□□□□□ -1.04
CCDC47-206ENST00000584112 OVCH2Q7RTZ1 564 aa8.57□□□□□ -1.04
CCDC47-206ENST00000584112 TPRA1Q86W33 373 aa8.57□□□□□ -1.04
CCDC47-206ENST00000584112 H1FOOQ8IZA3 346 aaPredicted RBP8.57□□□□□ -1.04
CCDC47-206ENST00000584112 POC5Q8NA72 575 aa8.57□□□□□ -1.04
CCDC47-206ENST00000584112 OR6Q1Q8NGQ2 317 aa8.57□□□□□ -1.04
CCDC47-206ENST00000584112 MAFIPQ8WZ33 124 aa8.57□□□□□ -1.04
CCDC47-206ENST00000584112 DLX4Q92988 240 aaPredicted RBP8.57□□□□□ -1.04
CCDC47-206ENST00000584112 TMEM68Q96MH6 324 aa8.57□□□□□ -1.04
CCDC47-206ENST00000584112 MS4A10Q96PG2 267 aa8.57□□□□□ -1.04
CCDC47-206ENST00000584112 YTHDF1Q9BYJ9 559 aaKnown RBP8.57□□□□□ -1.04
CCDC47-206ENST00000584112 TPSG1Q9NRR2 321 aa8.57□□□□□ -1.04
CCDC47-206ENST00000584112 ZNF355PQ9NSJ1 428 aa8.57□□□□□ -1.04
CCDC47-206ENST00000584112 TXNL4BQ9NX01 149 aaKnown RBP8.57□□□□□ -1.04
CCDC47-206ENST00000584112 STUB1Q9UNE7 303 aa8.57□□□□□ -1.04
CCDC47-206ENST00000584112 SSR3Q9UNL2 185 aa8.57□□□□□ -1.04
CCDC47-206ENST00000584112 IGHV4OR15-8A0A075B7B6 117 aa8.56□□□□□ -1.04
CCDC47-206ENST00000584112 A0A087WW49 117 aa8.56□□□□□ -1.04
CCDC47-206ENST00000584112 A0A0B4J203 849 aa8.56□□□□□ -1.04
CCDC47-206ENST00000584112 A0A0G2JLM5 398 aa8.56□□□□□ -1.04
CCDC47-206ENST00000584112 C13orf42A0A1B0GVH6 325 aa8.56□□□□□ -1.04
CCDC47-206ENST00000584112 IGLV2-23P01705 113 aa8.56□□□□□ -1.04
CCDC47-206ENST00000584112 CTXN2P0C2S0 81 aa8.56□□□□□ -1.04
CCDC47-206ENST00000584112 PITPNAQ00169 270 aa8.56□□□□□ -1.04
CCDC47-206ENST00000584112 VMA21Q3ZAQ7 101 aa8.56□□□□□ -1.04
CCDC47-206ENST00000584112 CDNFQ49AH0 187 aa8.56□□□□□ -1.04
CCDC47-206ENST00000584112 NR2C2APQ86WQ0 139 aa8.56□□□□□ -1.04
CCDC47-206ENST00000584112 SPARTQ8N0X7 666 aa8.56□□□□□ -1.04
CCDC47-206ENST00000584112 BVESQ8NE79 360 aa8.56□□□□□ -1.04
CCDC47-206ENST00000584112 RHOVQ96L33 236 aa8.56□□□□□ -1.04
CCDC47-206ENST00000584112 DCSTAMPQ9H295 470 aa8.56□□□□□ -1.04
CCDC47-206ENST00000584112 SMAD5-AS1Q9Y6J3 95 aa8.56□□□□□ -1.04
CCDC47-206ENST00000584112 SMIM30A4D0T7 59 aa8.55□□□□□ -1.04
CCDC47-206ENST00000584112 CREBL2O60519 120 aaPredicted RBP8.55□□□□□ -1.04
CCDC47-206ENST00000584112 SLC22A5O76082 557 aa8.55□□□□□ -1.04
CCDC47-206ENST00000584112 CRYGBP07316 175 aa8.55□□□□□ -1.04
CCDC47-206ENST00000584112 ZP3P21754 424 aa8.55□□□□□ -1.04
CCDC47-206ENST00000584112 DUTP33316 252 aaKnown RBP8.55□□□□□ -1.04
CCDC47-206ENST00000584112 HACD4Q5VWC8 232 aa8.55□□□□□ -1.04
CCDC47-206ENST00000584112 ACSM6Q6P461 480 aa8.55□□□□□ -1.04
CCDC47-206ENST00000584112 TEX45Q8NA69 505 aa8.55□□□□□ -1.04
CCDC47-206ENST00000584112 C5orf30Q96GV9 206 aa8.55□□□□□ -1.04
CCDC47-206ENST00000584112 OR4C12Q96R67 309 aa8.55□□□□□ -1.04
CCDC47-206ENST00000584112 ELOVL1Q9BW60 279 aa8.55□□□□□ -1.04
CCDC47-206ENST00000584112 RANGRFQ9HD47 186 aaPredicted RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms