RNA–Protein interactions for RNA: ENST00000583380.5

SKA2-207, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 5 BASIC

Gene SKA2, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-207ENST00000583380 ODF3L1Q8IXM7 274 aa7.97□□□□□ -1.13
SKA2-207ENST00000583380 ADTRPQ96IZ2 230 aa7.97□□□□□ -1.13
SKA2-207ENST00000583380 TRIB1Q96RU8 372 aa7.97□□□□□ -1.13
SKA2-207ENST00000583380 RAB1BQ9H0U4 201 aa7.97□□□□□ -1.13
SKA2-207ENST00000583380 LIN7CQ9NUP9 197 aaKnown RBP7.97□□□□□ -1.13
SKA2-207ENST00000583380 SLC17A4Q9Y2C5 497 aa7.97□□□□□ -1.13
SKA2-207ENST00000583380 COA3Q9Y2R0 106 aaPredicted RBP7.97□□□□□ -1.13
SKA2-207ENST00000583380 FANCMQ8IYD8 2048 aa7.96□□□□□ -1.13
SKA2-207ENST00000583380 NUMA1Q14980 2115 aa7.96□□□□□ -1.13
SKA2-207ENST00000583380 TMEM213A2RRL7 107 aa7.96□□□□□ -1.14
SKA2-207ENST00000583380 PRR33A8MZF0 331 aa7.96□□□□□ -1.14
SKA2-207ENST00000583380 BMPR1BO00238 502 aa7.96□□□□□ -1.14
SKA2-207ENST00000583380 SOX1O00570 391 aaPredicted RBP7.96□□□□□ -1.14
SKA2-207ENST00000583380 TLX3O43711 291 aaPredicted RBP7.96□□□□□ -1.14
SKA2-207ENST00000583380 TUSC2O75896 110 aa7.96□□□□□ -1.14
SKA2-207ENST00000583380 OR7C1O76099 320 aaPredicted RBP7.96□□□□□ -1.14
SKA2-207ENST00000583380 LEPROTL1O95214 131 aa7.96□□□□□ -1.14
SKA2-207ENST00000583380 TMEM50AO95807 157 aa7.96□□□□□ -1.14
SKA2-207ENST00000583380 IGLV3-1P01715 115 aa7.96□□□□□ -1.14
SKA2-207ENST00000583380 CELA2BP08218 269 aaPredicted RBP7.96□□□□□ -1.14
SKA2-207ENST00000583380 CD70P32970 193 aa7.96□□□□□ -1.14
SKA2-207ENST00000583380 EGR4Q05215 589 aa7.96□□□□□ -1.14
SKA2-207ENST00000583380 DLX2Q07687 328 aaPredicted RBP7.96□□□□□ -1.14
SKA2-207ENST00000583380 SRSF1Q07955 248 aaKnown RBP eCLIP7.96□□□□□ -1.14
SKA2-207ENST00000583380 SAMD5Q5TGI4 173 aa7.96□□□□□ -1.14
SKA2-207ENST00000583380 LYRM7Q5U5X0 104 aa7.96□□□□□ -1.14
SKA2-207ENST00000583380 INO80CQ6PI98 192 aaPredicted RBP7.96□□□□□ -1.14
SKA2-207ENST00000583380 ZNF788Q6ZQV5 615 aa7.96□□□□□ -1.14
SKA2-207ENST00000583380 TCF23Q7RTU1 214 aa7.96□□□□□ -1.14
SKA2-207ENST00000583380 LINC00596Q86U02 117 aa7.96□□□□□ -1.14
SKA2-207ENST00000583380 HAPLN4Q86UW8 402 aa7.96□□□□□ -1.14
SKA2-207ENST00000583380 GCSAMQ8N6F7 178 aa7.96□□□□□ -1.14
SKA2-207ENST00000583380 WDR31Q8NA23 367 aa7.96□□□□□ -1.14
SKA2-207ENST00000583380 NHLRC2Q8NBF2 726 aa7.96□□□□□ -1.14
SKA2-207ENST00000583380 ZBTB34Q8NCN2 500 aa7.96□□□□□ -1.14
SKA2-207ENST00000583380 OR10X1Q8NGY0 326 aa7.96□□□□□ -1.14
SKA2-207ENST00000583380 OR10D3Q8NH80 312 aa7.96□□□□□ -1.14
SKA2-207ENST00000583380 OR1L1Q8NH94 360 aa7.96□□□□□ -1.14
SKA2-207ENST00000583380 OCC1Q8TAD7 63 aa7.96□□□□□ -1.14
SKA2-207ENST00000583380 PIFOQ8TCI5 191 aa7.96□□□□□ -1.14
SKA2-207ENST00000583380 H1FXQ92522 213 aaKnown RBP7.96□□□□□ -1.14
SKA2-207ENST00000583380 C19orf24Q9BVV8 132 aa7.96□□□□□ -1.14
SKA2-207ENST00000583380 PHF7Q9BWX1 381 aaPredicted RBP7.96□□□□□ -1.14
SKA2-207ENST00000583380 RBM24Q9BX46 236 aaKnown RBP7.96□□□□□ -1.14
SKA2-207ENST00000583380 TMEM167BQ9NRX6 74 aa7.96□□□□□ -1.14
SKA2-207ENST00000583380 HIGD1BQ9P298 99 aa7.96□□□□□ -1.14
SKA2-207ENST00000583380 PLAGL1Q9UM63 463 aa7.96□□□□□ -1.14
SKA2-207ENST00000583380 TSSC4Q9Y5U2 329 aaPredicted RBP7.96□□□□□ -1.14
SKA2-207ENST00000583380 KMT2EQ8IZD2 1858 aa7.96□□□□□ -1.14
SKA2-207ENST00000583380 VWA8A3KMH1 1905 aa7.95□□□□□ -1.14
SKA2-207ENST00000583380 A1L4Q6 167 aa7.95□□□□□ -1.14
SKA2-207ENST00000583380 H3BSH0 61 aa7.95□□□□□ -1.14
SKA2-207ENST00000583380 DHHO43323 396 aa7.95□□□□□ -1.14
SKA2-207ENST00000583380 WIPF1O43516 503 aa7.95□□□□□ -1.14
SKA2-207ENST00000583380 BNIP3LO60238 219 aa7.95□□□□□ -1.14
SKA2-207ENST00000583380 NEURL1O76050 574 aa7.95□□□□□ -1.14
SKA2-207ENST00000583380 EML2O95834 649 aa7.95□□□□□ -1.14
SKA2-207ENST00000583380 FCGR2AP12318 317 aa7.95□□□□□ -1.14
SKA2-207ENST00000583380 SELPP16109 830 aa7.95□□□□□ -1.14
SKA2-207ENST00000583380 OPRK1P41145 380 aa7.95□□□□□ -1.14
SKA2-207ENST00000583380 ZNF121P58317 390 aaPredicted RBP7.95□□□□□ -1.14
SKA2-207ENST00000583380 RPS18P62269 152 aaKnown RBP7.95□□□□□ -1.14
SKA2-207ENST00000583380 IGLV3-21P80748 117 aaPredicted RBP7.95□□□□□ -1.14
SKA2-207ENST00000583380 VGLL4Q14135 290 aa7.95□□□□□ -1.14
SKA2-207ENST00000583380 CARD17Q5XLA6 110 aa7.95□□□□□ -1.14
SKA2-207ENST00000583380 FAM231DQ6ZW35 169 aa7.95□□□□□ -1.14
SKA2-207ENST00000583380 TPRX1Q8N7U7 411 aa7.95□□□□□ -1.14
SKA2-207ENST00000583380 BCORP1Q8N888 145 aa7.95□□□□□ -1.14
SKA2-207ENST00000583380 SUMF1Q8NBK3 374 aa7.95□□□□□ -1.14
SKA2-207ENST00000583380 OR2M3Q8NG83 312 aa7.95□□□□□ -1.14
SKA2-207ENST00000583380 WFDC5Q8TCV5 224 aa7.95□□□□□ -1.14
SKA2-207ENST00000583380 KCNK17Q96T54 332 aa7.95□□□□□ -1.14
SKA2-207ENST00000583380 FNDC4Q9H6D8 234 aaPredicted RBP7.95□□□□□ -1.14
SKA2-207ENST00000583380 PNRC2Q9NPJ4 139 aaKnown RBP7.95□□□□□ -1.14
SKA2-207ENST00000583380 V9GYV3 84 aa7.95□□□□□ -1.14
SKA2-207ENST00000583380 LOC102724200A0A096LPH7 203 aaPredicted RBP7.94□□□□□ -1.14
SKA2-207ENST00000583380 TRBV6-6A0A0A6YYG2 114 aa7.94□□□□□ -1.14
SKA2-207ENST00000583380 A0A1B0GUS0 222 aa7.94□□□□□ -1.14
SKA2-207ENST00000583380 TEX48A0A1B0GUV7 120 aa7.94□□□□□ -1.14
SKA2-207ENST00000583380 TMEM8BA6NDV4 472 aa7.94□□□□□ -1.14
SKA2-207ENST00000583380 SHISA7A6NL88 538 aa7.94□□□□□ -1.14
SKA2-207ENST00000583380 SHISA9B4DS77 424 aa7.94□□□□□ -1.14
SKA2-207ENST00000583380 NPIPB11E5RHQ5 1161 aa7.94□□□□□ -1.14
SKA2-207ENST00000583380 H3BUT2 72 aa7.94□□□□□ -1.14
SKA2-207ENST00000583380 K7EQS6 105 aa7.94□□□□□ -1.14
SKA2-207ENST00000583380 ATXN7O15265 892 aaPredicted RBP7.94□□□□□ -1.14
SKA2-207ENST00000583380 SUMO3P55854 103 aaPredicted RBP7.94□□□□□ -1.14
SKA2-207ENST00000583380 PSG4Q00888 419 aa7.94□□□□□ -1.14
SKA2-207ENST00000583380 PLCXD2Q0VAA5 305 aa7.94□□□□□ -1.14
SKA2-207ENST00000583380 TRIP6Q15654 476 aaKnown RBP7.94□□□□□ -1.14
SKA2-207ENST00000583380 TAL2Q16559 108 aa7.94□□□□□ -1.14
SKA2-207ENST00000583380 C5orf47Q569G3 176 aa7.94□□□□□ -1.14
SKA2-207ENST00000583380 ABHD17BQ5VST6 288 aa7.94□□□□□ -1.14
SKA2-207ENST00000583380 LINC01545Q5VT33 79 aa7.94□□□□□ -1.14
SKA2-207ENST00000583380 Q6ZVH6 145 aa7.94□□□□□ -1.14
SKA2-207ENST00000583380 H1FNTQ75WM6 255 aaPredicted RBP7.94□□□□□ -1.14
SKA2-207ENST00000583380 C6orf201Q7Z4U5 140 aa7.94□□□□□ -1.14
SKA2-207ENST00000583380 C2orf73Q8N5S3 287 aaPredicted RBP7.94□□□□□ -1.14
SKA2-207ENST00000583380 OR8B12Q8NGG6 310 aa7.94□□□□□ -1.14
SKA2-207ENST00000583380 OR1L3Q8NH93 324 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms