RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 CD300LFQ8TDQ1 290 aa13.16□□□□□ -0.3
CDK5RAP3-228ENST00000583363 GLYATL2Q8WU03 294 aa13.16□□□□□ -0.3
CDK5RAP3-228ENST00000583363 TMEM158Q8WZ71 300 aa13.16□□□□□ -0.3
CDK5RAP3-228ENST00000583363 CFHR4Q92496 578 aa13.16□□□□□ -0.3
CDK5RAP3-228ENST00000583363 LIN7CQ9NUP9 197 aaKnown RBP13.16□□□□□ -0.3
CDK5RAP3-228ENST00000583363 FAM96BQ9Y3D0 163 aa13.16□□□□□ -0.3
CDK5RAP3-228ENST00000583363 A0A0B4J293 547 aa13.15□□□□□ -0.3
CDK5RAP3-228ENST00000583363 FAM90A9PA6NNJ1 464 aa13.15□□□□□ -0.3
CDK5RAP3-228ENST00000583363 SNRPGP15A8MWD9 76 aa13.15□□□□□ -0.3
CDK5RAP3-228ENST00000583363 TIMM23O14925 209 aa13.15□□□□□ -0.3
CDK5RAP3-228ENST00000583363 RBFOX2O43251 390 aaKnown RBP eCLIP13.15□□□□□ -0.3
CDK5RAP3-228ENST00000583363 FCGR3BO75015 233 aa13.15□□□□□ -0.3
CDK5RAP3-228ENST00000583363 RRASP10301 218 aa13.15□□□□□ -0.3
CDK5RAP3-228ENST00000583363 ANXA3P12429 323 aa13.15□□□□□ -0.3
CDK5RAP3-228ENST00000583363 VAMP1P23763 118 aa13.15□□□□□ -0.3
CDK5RAP3-228ENST00000583363 UCP1P25874 307 aa13.15□□□□□ -0.3
CDK5RAP3-228ENST00000583363 CD1BP29016 333 aa13.15□□□□□ -0.3
CDK5RAP3-228ENST00000583363 IL17RELQ6ZVW7 336 aa13.15□□□□□ -0.3
CDK5RAP3-228ENST00000583363 ZNF431Q8TF32 576 aaPredicted RBP13.15□□□□□ -0.3
CDK5RAP3-228ENST00000583363 TMEM222Q9H0R3 208 aa13.15□□□□□ -0.3
CDK5RAP3-228ENST00000583363 GPN1Q9HCN4 374 aaPredicted RBP13.15□□□□□ -0.3
CDK5RAP3-228ENST00000583363 SLC35D1Q9NTN3 355 aa13.15□□□□□ -0.3
CDK5RAP3-228ENST00000583363 NBEAL1Q6ZS30 2694 aa13.15□□□□□ -0.31
CDK5RAP3-228ENST00000583363 A0A0A6YYJ9 748 aa13.14□□□□□ -0.31
CDK5RAP3-228ENST00000583363 IGHV3-72A0A0B4J1Y9 119 aa13.14□□□□□ -0.31
CDK5RAP3-228ENST00000583363 C7orf66A4D0T2 115 aa13.14□□□□□ -0.31
CDK5RAP3-228ENST00000583363 RAMP3O60896 148 aa13.14□□□□□ -0.31
CDK5RAP3-228ENST00000583363 DUS4LO95620 317 aaKnown RBP13.14□□□□□ -0.31
CDK5RAP3-228ENST00000583363 CDS2O95674 445 aa13.14□□□□□ -0.31
CDK5RAP3-228ENST00000583363 HLA-AP01891 365 aaKnown RBP13.14□□□□□ -0.31
CDK5RAP3-228ENST00000583363 APOA2P02652 100 aa13.14□□□□□ -0.31
CDK5RAP3-228ENST00000583363 SRP14P37108 136 aaKnown RBP13.14□□□□□ -0.31
CDK5RAP3-228ENST00000583363 LPAR6P43657 344 aa13.14□□□□□ -0.31
CDK5RAP3-228ENST00000583363 ANKRD55Q3KP44 614 aa13.14□□□□□ -0.31
CDK5RAP3-228ENST00000583363 OR2B11Q5JQS5 317 aa13.14□□□□□ -0.31
CDK5RAP3-228ENST00000583363 LIAT1Q6ZQX7 453 aa13.14□□□□□ -0.31
CDK5RAP3-228ENST00000583363 THNSL2Q86YJ6 484 aa13.14□□□□□ -0.31
CDK5RAP3-228ENST00000583363 CASTOR1Q8WTX7 329 aa13.14□□□□□ -0.31
CDK5RAP3-228ENST00000583363 MITD1Q8WV92 249 aa13.14□□□□□ -0.31
CDK5RAP3-228ENST00000583363 RBMXL1Q96E39 390 aaKnown RBP13.14□□□□□ -0.31
CDK5RAP3-228ENST00000583363 TMEM56Q96MV1 263 aa13.14□□□□□ -0.31
CDK5RAP3-228ENST00000583363 WASHC3Q9Y3C0 194 aa13.14□□□□□ -0.31
CDK5RAP3-228ENST00000583363 ALG5Q9Y673 324 aa13.14□□□□□ -0.31
CDK5RAP3-228ENST00000583363 TMEM56-RWDD3S4R434 201 aa13.14□□□□□ -0.31
CDK5RAP3-228ENST00000583363 A0A0B4J2A0 478 aa13.13□□□□□ -0.31
CDK5RAP3-228ENST00000583363 VGLL3A8MV65 326 aa13.13□□□□□ -0.31
CDK5RAP3-228ENST00000583363 HPRT1P00492 218 aa13.13□□□□□ -0.31
CDK5RAP3-228ENST00000583363 SERPINE2P07093 398 aa13.13□□□□□ -0.31
CDK5RAP3-228ENST00000583363 FBP1P09467 338 aa13.13□□□□□ -0.31
CDK5RAP3-228ENST00000583363 HNF1AP20823 631 aa13.13□□□□□ -0.31
CDK5RAP3-228ENST00000583363 BRS3P32247 399 aa13.13□□□□□ -0.31
CDK5RAP3-228ENST00000583363 DYNLT3P51808 116 aa13.13□□□□□ -0.31
CDK5RAP3-228ENST00000583363 ARHGDIBP52566 201 aa13.13□□□□□ -0.31
CDK5RAP3-228ENST00000583363 RTL8BQ17RB0 113 aa13.13□□□□□ -0.31
CDK5RAP3-228ENST00000583363 DEFB112Q30KQ8 113 aa13.13□□□□□ -0.31
CDK5RAP3-228ENST00000583363 PDPNQ86YL7 162 aa13.13□□□□□ -0.31
CDK5RAP3-228ENST00000583363 SELENOHQ8IZQ5 122 aaKnown RBP13.13□□□□□ -0.31
CDK5RAP3-228ENST00000583363 OR4S2Q8NH73 311 aa13.13□□□□□ -0.31
CDK5RAP3-228ENST00000583363 PRR13Q9NZ81 148 aa13.13□□□□□ -0.31
CDK5RAP3-228ENST00000583363 SHPKQ9UHJ6 478 aa13.13□□□□□ -0.31
CDK5RAP3-228ENST00000583363 H7C2Y5 167 aa13.12□□□□□ -0.31
CDK5RAP3-228ENST00000583363 IGKV1-39P01597 117 aa13.12□□□□□ -0.31
CDK5RAP3-228ENST00000583363 IGKV1-16P04430 117 aa13.12□□□□□ -0.31
CDK5RAP3-228ENST00000583363 IGKV1D-39P04432 117 aa13.12□□□□□ -0.31
CDK5RAP3-228ENST00000583363 RPA2P15927 270 aa13.12□□□□□ -0.31
CDK5RAP3-228ENST00000583363 RAB13P51153 203 aa13.12□□□□□ -0.31
CDK5RAP3-228ENST00000583363 EBI3Q14213 229 aa13.12□□□□□ -0.31
CDK5RAP3-228ENST00000583363 AANATQ16613 207 aa13.12□□□□□ -0.31
CDK5RAP3-228ENST00000583363 TUSC1Q2TAM9 212 aa13.12□□□□□ -0.31
CDK5RAP3-228ENST00000583363 TMEM177Q53S58 311 aa13.12□□□□□ -0.31
CDK5RAP3-228ENST00000583363 DHRS7BQ6IAN0 325 aaPredicted RBP13.12□□□□□ -0.31
CDK5RAP3-228ENST00000583363 LGI3Q8N145 548 aa13.12□□□□□ -0.31
CDK5RAP3-228ENST00000583363 C12orf45Q8N5I9 185 aaPredicted RBP13.12□□□□□ -0.31
CDK5RAP3-228ENST00000583363 LRTM2Q8N967 370 aa13.12□□□□□ -0.31
CDK5RAP3-228ENST00000583363 COQ8AQ8NI60 647 aa13.12□□□□□ -0.31
CDK5RAP3-228ENST00000583363 LHFPL5Q8TAF8 219 aa13.12□□□□□ -0.31
CDK5RAP3-228ENST00000583363 PIFOQ8TCI5 191 aa13.12□□□□□ -0.31
CDK5RAP3-228ENST00000583363 C22orf15Q8WYQ4 148 aa13.12□□□□□ -0.31
CDK5RAP3-228ENST00000583363 FLYWCH2Q96CP2 140 aaKnown RBP13.12□□□□□ -0.31
CDK5RAP3-228ENST00000583363 RITA1Q96K30 269 aa13.12□□□□□ -0.31
CDK5RAP3-228ENST00000583363 OR51J1Q9H342 316 aa13.12□□□□□ -0.31
CDK5RAP3-228ENST00000583363 PRDM13Q9H4Q3 707 aa13.12□□□□□ -0.31
CDK5RAP3-228ENST00000583363 PLEKHA2Q9HB19 425 aa13.12□□□□□ -0.31
CDK5RAP3-228ENST00000583363 CREBL2O60519 120 aaPredicted RBP13.11□□□□□ -0.31
CDK5RAP3-228ENST00000583363 VENTXO95231 258 aa13.11□□□□□ -0.31
CDK5RAP3-228ENST00000583363 CRYZL1O95825 349 aa13.11□□□□□ -0.31
CDK5RAP3-228ENST00000583363 FAM157CP0CG43 387 aa13.11□□□□□ -0.31
CDK5RAP3-228ENST00000583363 CD24P25063 80 aa13.11□□□□□ -0.31
CDK5RAP3-228ENST00000583363 SRPXP78539 464 aa13.11□□□□□ -0.31
CDK5RAP3-228ENST00000583363 CBX3Q13185 183 aa13.11□□□□□ -0.31
CDK5RAP3-228ENST00000583363 ZNF695Q8IW36 515 aa13.11□□□□□ -0.31
CDK5RAP3-228ENST00000583363 OR4C13Q8NGP0 309 aa13.11□□□□□ -0.31
CDK5RAP3-228ENST00000583363 IL22RA2Q969J5 263 aa13.11□□□□□ -0.31
CDK5RAP3-228ENST00000583363 ZNF48Q96MX3 618 aaPredicted RBP13.11□□□□□ -0.31
CDK5RAP3-228ENST00000583363 PHB2Q99623 299 aa13.11□□□□□ -0.31
CDK5RAP3-228ENST00000583363 SSX3Q99909 188 aa13.11□□□□□ -0.31
CDK5RAP3-228ENST00000583363 RNF5Q99942 180 aa13.11□□□□□ -0.31
CDK5RAP3-228ENST00000583363 MDFIC2A0A1B0GVS7 189 aa13.1□□□□□ -0.31
CDK5RAP3-228ENST00000583363 SRRM4A7MD48 611 aaKnown RBP13.1□□□□□ -0.31
CDK5RAP3-228ENST00000583363 S1PR2O95136 353 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms