RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 TRAT1Q6PIZ9 186 aa9.39□□□□□ -0.91
TOP3A-215ENST00000583328 UNQ5815/PRO19632Q6UWF5 114 aa9.39□□□□□ -0.91
TOP3A-215ENST00000583328 SAMD12Q8N8I0 201 aa9.39□□□□□ -0.91
TOP3A-215ENST00000583328 OR4K15Q8NH41 348 aa9.39□□□□□ -0.91
TOP3A-215ENST00000583328 MRPL30Q8TCC3 161 aaKnown RBP9.39□□□□□ -0.91
TOP3A-215ENST00000583328 CYYR1Q96J86 154 aa9.39□□□□□ -0.91
TOP3A-215ENST00000583328 CMTM3Q96MX0 182 aa9.39□□□□□ -0.91
TOP3A-215ENST00000583328 RIMS4Q9H426 269 aaPredicted RBP9.39□□□□□ -0.91
TOP3A-215ENST00000583328 FBXL15Q9H469 300 aa9.39□□□□□ -0.91
TOP3A-215ENST00000583328 RANGRFQ9HD47 186 aaPredicted RBP9.39□□□□□ -0.91
TOP3A-215ENST00000583328 OR2S2Q9NQN1 319 aa9.39□□□□□ -0.91
TOP3A-215ENST00000583328 AK3Q9UIJ7 227 aa9.39□□□□□ -0.91
TOP3A-215ENST00000583328 A0A075B6Q4 140 aa9.38□□□□□ -0.91
TOP3A-215ENST00000583328 TRBV6-6A0A0A6YYG2 114 aa9.38□□□□□ -0.91
TOP3A-215ENST00000583328 NAPSAO96009 420 aa9.38□□□□□ -0.91
TOP3A-215ENST00000583328 APOA1P02647 267 aa9.38□□□□□ -0.91
TOP3A-215ENST00000583328 TRGV3P03979 118 aa9.38□□□□□ -0.91
TOP3A-215ENST00000583328 GSTP1P09211 210 aaKnown RBP9.38□□□□□ -0.91
TOP3A-215ENST00000583328 EGR2P11161 476 aaPredicted RBP9.38□□□□□ -0.91
TOP3A-215ENST00000583328 MORN2Q502X0 79 aa9.38□□□□□ -0.91
TOP3A-215ENST00000583328 MOB1BQ7L9L4 216 aa9.38□□□□□ -0.91
TOP3A-215ENST00000583328 ZNF554Q86TJ5 538 aa9.38□□□□□ -0.91
TOP3A-215ENST00000583328 PPP1R27Q86WC6 154 aa9.38□□□□□ -0.91
TOP3A-215ENST00000583328 LINC00476Q8WZB0 136 aa9.38□□□□□ -0.91
TOP3A-215ENST00000583328 DDB2Q92466 427 aa9.38□□□□□ -0.91
TOP3A-215ENST00000583328 S100A16Q96FQ6 103 aaKnown RBP9.38□□□□□ -0.91
TOP3A-215ENST00000583328 ABHD14AQ9BUJ0 271 aa9.38□□□□□ -0.91
TOP3A-215ENST00000583328 SLA2Q9H6Q3 261 aa9.38□□□□□ -0.91
TOP3A-215ENST00000583328 CHMP1AQ9HD42 196 aaPredicted RBP9.38□□□□□ -0.91
TOP3A-215ENST00000583328 C12orf4Q9NQ89 552 aa9.38□□□□□ -0.91
TOP3A-215ENST00000583328 DIABLOQ9NR28 239 aa9.38□□□□□ -0.91
TOP3A-215ENST00000583328 MBNL3Q9NUK0 354 aaKnown RBP9.38□□□□□ -0.91
TOP3A-215ENST00000583328 COMMD3Q9UBI1 195 aa9.38□□□□□ -0.91
TOP3A-215ENST00000583328 KCNK7Q9Y2U2 307 aa9.38□□□□□ -0.91
TOP3A-215ENST00000583328 ANKRD34BA5PLL1 514 aa9.37□□□□□ -0.91
TOP3A-215ENST00000583328 DPPA5A6NC42 116 aa9.37□□□□□ -0.91
TOP3A-215ENST00000583328 FCN1O00602 326 aa9.37□□□□□ -0.91
TOP3A-215ENST00000583328 RRHO14718 337 aa9.37□□□□□ -0.91
TOP3A-215ENST00000583328 CD3GP09693 182 aa9.37□□□□□ -0.91
TOP3A-215ENST00000583328 GNB3P16520 340 aa9.37□□□□□ -0.91
TOP3A-215ENST00000583328 MRPS15P82914 257 aaKnown RBP9.37□□□□□ -0.91
TOP3A-215ENST00000583328 AKIRIN2Q53H80 203 aa9.37□□□□□ -0.91
TOP3A-215ENST00000583328 LCN12Q6JVE5 192 aa9.37□□□□□ -0.91
TOP3A-215ENST00000583328 ZNF880Q6PDB4 577 aa9.37□□□□□ -0.91
TOP3A-215ENST00000583328 ODF3L1Q8IXM7 274 aa9.37□□□□□ -0.91
TOP3A-215ENST00000583328 LFNGQ8NES3 379 aa9.37□□□□□ -0.91
TOP3A-215ENST00000583328 OR52L2PQ8NGH6 319 aa9.37□□□□□ -0.91
TOP3A-215ENST00000583328 OR9G4Q8NGQ1 327 aa9.37□□□□□ -0.91
TOP3A-215ENST00000583328 CMSS1Q9BQ75 279 aaKnown RBP9.37□□□□□ -0.91
TOP3A-215ENST00000583328 FAM103A1Q9BTL3 118 aaKnown RBP9.37□□□□□ -0.91
TOP3A-215ENST00000583328 ZNF355PQ9NSJ1 428 aa9.37□□□□□ -0.91
TOP3A-215ENST00000583328 KCNIP1Q9NZI2 227 aa9.37□□□□□ -0.91
TOP3A-215ENST00000583328 TRAV18A0A075B6X5 111 aa9.36□□□□□ -0.91
TOP3A-215ENST00000583328 C13orf42A0A1B0GVH6 325 aa9.36□□□□□ -0.91
TOP3A-215ENST00000583328 XRCC3O43542 346 aa9.36□□□□□ -0.91
TOP3A-215ENST00000583328 EIF4EP06730 217 aaKnown RBP9.36□□□□□ -0.91
TOP3A-215ENST00000583328 RCC1P18754 421 aaPredicted RBP9.36□□□□□ -0.91
TOP3A-215ENST00000583328 PPP1CCP36873 323 aaKnown RBP9.36□□□□□ -0.91
TOP3A-215ENST00000583328 OR3A3P47888 321 aa9.36□□□□□ -0.91
TOP3A-215ENST00000583328 ARFRP1Q13795 201 aa9.36□□□□□ -0.91
TOP3A-215ENST00000583328 KLF5Q13887 457 aaPredicted RBP9.36□□□□□ -0.91
TOP3A-215ENST00000583328 GNMTQ14749 295 aa9.36□□□□□ -0.91
TOP3A-215ENST00000583328 CDNFQ49AH0 187 aa9.36□□□□□ -0.91
TOP3A-215ENST00000583328 IL34Q6ZMJ4 242 aa9.36□□□□□ -0.91
TOP3A-215ENST00000583328 Q8N402 240 aa9.36□□□□□ -0.91
TOP3A-215ENST00000583328 DGCR14Q96DF8 476 aaKnown RBP9.36□□□□□ -0.91
TOP3A-215ENST00000583328 CLCC1Q96S66 551 aa9.36□□□□□ -0.91
TOP3A-215ENST00000583328 HDHD3Q9BSH5 251 aaPredicted RBP9.36□□□□□ -0.91
TOP3A-215ENST00000583328 THAP7Q9BT49 309 aaPredicted RBP9.36□□□□□ -0.91
TOP3A-215ENST00000583328 PLEKHA3Q9HB20 300 aa9.36□□□□□ -0.91
TOP3A-215ENST00000583328 TAF9BQ9HBM6 251 aa9.36□□□□□ -0.91
TOP3A-215ENST00000583328 MGAT4AQ9UM21 535 aa9.36□□□□□ -0.91
TOP3A-215ENST00000583328 GAB2Q9UQC2 676 aa9.36□□□□□ -0.91
TOP3A-215ENST00000583328 TMEM235A6NFC5 223 aa9.35□□□□□ -0.91
TOP3A-215ENST00000583328 HPGDSO60760 199 aa9.35□□□□□ -0.91
TOP3A-215ENST00000583328 CNIH1O95406 144 aa9.35□□□□□ -0.91
TOP3A-215ENST00000583328 ELK1P19419 428 aa9.35□□□□□ -0.91
TOP3A-215ENST00000583328 TALDO1P37837 337 aa9.35□□□□□ -0.91
TOP3A-215ENST00000583328 SYNJ2BPP57105 145 aa9.35□□□□□ -0.91
TOP3A-215ENST00000583328 GNG2P59768 71 aa9.35□□□□□ -0.91
TOP3A-215ENST00000583328 HMGN3Q15651 99 aa9.35□□□□□ -0.91
TOP3A-215ENST00000583328 TATDN3Q17R31 274 aa9.35□□□□□ -0.91
TOP3A-215ENST00000583328 TMEM69Q5SWH9 247 aa9.35□□□□□ -0.91
TOP3A-215ENST00000583328 HACD4Q5VWC8 232 aa9.35□□□□□ -0.91
TOP3A-215ENST00000583328 FAM131AQ6UXB0 335 aa9.35□□□□□ -0.91
TOP3A-215ENST00000583328 LINC00322Q6ZN03 302 aaPredicted RBP9.35□□□□□ -0.91
TOP3A-215ENST00000583328 ZNF833PQ6ZTB9 187 aa9.35□□□□□ -0.91
TOP3A-215ENST00000583328 SETD6Q8TBK2 473 aa9.35□□□□□ -0.91
TOP3A-215ENST00000583328 DCUN1D5Q9BTE7 237 aa9.35□□□□□ -0.91
TOP3A-215ENST00000583328 SLIRPQ9GZT3 109 aaKnown RBP9.35□□□□□ -0.91
TOP3A-215ENST00000583328 AUNIPQ9H7T9 357 aa9.35□□□□□ -0.91
TOP3A-215ENST00000583328 Q9N2K0 584 aa9.35□□□□□ -0.91
TOP3A-215ENST00000583328 ADAM30Q9UKF2 790 aa9.35□□□□□ -0.91
TOP3A-215ENST00000583328 SAA2-SAA4A0A096LPE2 208 aa9.34□□□□□ -0.91
TOP3A-215ENST00000583328 A0A0G2JLM5 398 aa9.34□□□□□ -0.91
TOP3A-215ENST00000583328 IZUMO1RA6ND01 250 aa9.34□□□□□ -0.91
TOP3A-215ENST00000583328 YPEL1O60688 119 aa9.34□□□□□ -0.91
TOP3A-215ENST00000583328 TPPPO94811 219 aa9.34□□□□□ -0.91
TOP3A-215ENST00000583328 BRI3O95415 125 aa9.34□□□□□ -0.91
TOP3A-215ENST00000583328 CSN3P07498 182 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms