RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-222ENST00000581708 RAB25P57735 213 aa9.78□□□□□ -0.84
CDK5RAP3-222ENST00000581708 KRTAP10-11P60412 298 aa9.78□□□□□ -0.84
CDK5RAP3-222ENST00000581708 UBE2KP61086 200 aa9.78□□□□□ -0.84
CDK5RAP3-222ENST00000581708 MXD1Q05195 221 aa9.78□□□□□ -0.84
CDK5RAP3-222ENST00000581708 VMA21Q3ZAQ7 101 aa9.78□□□□□ -0.84
CDK5RAP3-222ENST00000581708 UNQ5815/PRO19632Q6UWF5 114 aa9.78□□□□□ -0.84
CDK5RAP3-222ENST00000581708 LFNGQ8NES3 379 aa9.78□□□□□ -0.84
CDK5RAP3-222ENST00000581708 NUDCD2Q8WVJ2 157 aa9.78□□□□□ -0.84
CDK5RAP3-222ENST00000581708 SLC25A38Q96DW6 304 aa9.78□□□□□ -0.84
CDK5RAP3-222ENST00000581708 ELF5Q9UKW6 265 aaPredicted RBP9.78□□□□□ -0.84
CDK5RAP3-222ENST00000581708 MRPS7Q9Y2R9 242 aaKnown RBP9.78□□□□□ -0.84
CDK5RAP3-222ENST00000581708 TRAV18A0A075B6X5 111 aa9.77□□□□□ -0.85
CDK5RAP3-222ENST00000581708 A0A0G2JLM5 398 aa9.77□□□□□ -0.85
CDK5RAP3-222ENST00000581708 TRIM64CA6NLI5 447 aa9.77□□□□□ -0.85
CDK5RAP3-222ENST00000581708 K7EIL1 84 aa9.77□□□□□ -0.85
CDK5RAP3-222ENST00000581708 SSX5O60225 188 aa9.77□□□□□ -0.85
CDK5RAP3-222ENST00000581708 TUSC2O75896 110 aa9.77□□□□□ -0.85
CDK5RAP3-222ENST00000581708 CNIH1O95406 144 aa9.77□□□□□ -0.85
CDK5RAP3-222ENST00000581708 LGALS1P09382 135 aaKnown RBP9.77□□□□□ -0.85
CDK5RAP3-222ENST00000581708 LINC00205P59089 165 aa9.77□□□□□ -0.85
CDK5RAP3-222ENST00000581708 DEFB136Q30KP8 78 aa9.77□□□□□ -0.85
CDK5RAP3-222ENST00000581708 OVCH2Q7RTZ1 564 aa9.77□□□□□ -0.85
CDK5RAP3-222ENST00000581708 HOGA1Q86XE5 327 aa9.77□□□□□ -0.85
CDK5RAP3-222ENST00000581708 BVESQ8NE79 360 aa9.77□□□□□ -0.85
CDK5RAP3-222ENST00000581708 BEST4Q8NFU0 473 aa9.77□□□□□ -0.85
CDK5RAP3-222ENST00000581708 KCTD12Q96CX2 325 aaKnown RBP9.77□□□□□ -0.85
CDK5RAP3-222ENST00000581708 YIPF6Q96EC8 236 aa9.77□□□□□ -0.85
CDK5RAP3-222ENST00000581708 S100A16Q96FQ6 103 aaKnown RBP9.77□□□□□ -0.85
CDK5RAP3-222ENST00000581708 DUX3Q96PT4 197 aa9.77□□□□□ -0.85
CDK5RAP3-222ENST00000581708 CLCC1Q96S66 551 aa9.77□□□□□ -0.85
CDK5RAP3-222ENST00000581708 HSD17B10Q99714 261 aaKnown RBP9.77□□□□□ -0.85
CDK5RAP3-222ENST00000581708 RNF167Q9H6Y7 350 aa9.77□□□□□ -0.85
CDK5RAP3-222ENST00000581708 AUNIPQ9H7T9 357 aa9.77□□□□□ -0.85
CDK5RAP3-222ENST00000581708 GNB4Q9HAV0 340 aa9.77□□□□□ -0.85
CDK5RAP3-222ENST00000581708 RBMX2Q9Y388 322 aaKnown RBP9.77□□□□□ -0.85
CDK5RAP3-222ENST00000581708 SEC14L6B5MCN3 397 aa9.76□□□□□ -0.85
CDK5RAP3-222ENST00000581708 XRCC3O43542 346 aa9.76□□□□□ -0.85
CDK5RAP3-222ENST00000581708 AADACP22760 399 aa9.76□□□□□ -0.85
CDK5RAP3-222ENST00000581708 HOXD3P31249 432 aaPredicted RBP9.76□□□□□ -0.85
CDK5RAP3-222ENST00000581708 ARPC4P59998 168 aa9.76□□□□□ -0.85
CDK5RAP3-222ENST00000581708 ZNF66Q6ZN08 573 aa9.76□□□□□ -0.85
CDK5RAP3-222ENST00000581708 ZBTB34Q8NCN2 500 aa9.76□□□□□ -0.85
CDK5RAP3-222ENST00000581708 OR5H6Q8NGV6 325 aa9.76□□□□□ -0.85
CDK5RAP3-222ENST00000581708 C5orf30Q96GV9 206 aa9.76□□□□□ -0.85
CDK5RAP3-222ENST00000581708 RHOVQ96L33 236 aa9.76□□□□□ -0.85
CDK5RAP3-222ENST00000581708 AIFM2Q9BRQ8 373 aa9.76□□□□□ -0.85
CDK5RAP3-222ENST00000581708 A3GALT2U3KPV4 340 aa9.76□□□□□ -0.85
CDK5RAP3-222ENST00000581708 COL7A1Q02388 2944 aa9.76□□□□□ -0.85
CDK5RAP3-222ENST00000581708 WI2-2373I1.2A0A1W2PRP0 233 aa9.75□□□□□ -0.85
CDK5RAP3-222ENST00000581708 LINC00473A8K010 186 aa9.75□□□□□ -0.85
CDK5RAP3-222ENST00000581708 LINC01619G3V211 115 aa9.75□□□□□ -0.85
CDK5RAP3-222ENST00000581708 CRYZL1O95825 349 aa9.75□□□□□ -0.85
CDK5RAP3-222ENST00000581708 HSPB1P04792 205 aaKnown RBP9.75□□□□□ -0.85
CDK5RAP3-222ENST00000581708 NFYAP23511 347 aaPredicted RBP9.75□□□□□ -0.85
CDK5RAP3-222ENST00000581708 GNB1P62873 340 aa9.75□□□□□ -0.85
CDK5RAP3-222ENST00000581708 SSBP2P81877 361 aaPredicted RBP9.75□□□□□ -0.85
CDK5RAP3-222ENST00000581708 PRSS8Q16651 343 aa9.75□□□□□ -0.85
CDK5RAP3-222ENST00000581708 UBE2NLQ5JXB2 153 aa9.75□□□□□ -0.85
CDK5RAP3-222ENST00000581708 KCTD9Q7L273 389 aa9.75□□□□□ -0.85
CDK5RAP3-222ENST00000581708 ZNF429Q86V71 674 aa9.75□□□□□ -0.85
CDK5RAP3-222ENST00000581708 POC5Q8NA72 575 aa9.75□□□□□ -0.85
CDK5RAP3-222ENST00000581708 GRPEL2Q8TAA5 225 aa9.75□□□□□ -0.85
CDK5RAP3-222ENST00000581708 VSTM2AQ8TAG5 236 aa9.75□□□□□ -0.85
CDK5RAP3-222ENST00000581708 BORCS5Q969J3 196 aa9.75□□□□□ -0.85
CDK5RAP3-222ENST00000581708 CMTM3Q96MX0 182 aa9.75□□□□□ -0.85
CDK5RAP3-222ENST00000581708 FAM103A1Q9BTL3 118 aaKnown RBP9.75□□□□□ -0.85
CDK5RAP3-222ENST00000581708 TPSG1Q9NRR2 321 aa9.75□□□□□ -0.85
CDK5RAP3-222ENST00000581708 SRRM4A7MD48 611 aaKnown RBP9.74□□□□□ -0.85
CDK5RAP3-222ENST00000581708 OVOL1O14753 267 aa9.74□□□□□ -0.85
CDK5RAP3-222ENST00000581708 IGLV2-14P01704 120 aa9.74□□□□□ -0.85
CDK5RAP3-222ENST00000581708 TRGV3P03979 118 aa9.74□□□□□ -0.85
CDK5RAP3-222ENST00000581708 RPS19P39019 145 aaKnown RBP9.74□□□□□ -0.85
CDK5RAP3-222ENST00000581708 KIR2DS2P43631 304 aa9.74□□□□□ -0.85
CDK5RAP3-222ENST00000581708 TPPP2P59282 170 aa9.74□□□□□ -0.85
CDK5RAP3-222ENST00000581708 PJVKQ0ZLH3 352 aa9.74□□□□□ -0.85
CDK5RAP3-222ENST00000581708 CDK10Q15131 360 aa9.74□□□□□ -0.85
CDK5RAP3-222ENST00000581708 ASPHD1Q5U4P2 390 aa9.74□□□□□ -0.85
CDK5RAP3-222ENST00000581708 MMD2Q8IY49 270 aa9.74□□□□□ -0.85
CDK5RAP3-222ENST00000581708 OR4S2Q8NH73 311 aa9.74□□□□□ -0.85
CDK5RAP3-222ENST00000581708 GIMAP1Q8WWP7 306 aa9.74□□□□□ -0.85
CDK5RAP3-222ENST00000581708 SLC25A46Q96AG3 418 aa9.74□□□□□ -0.85
CDK5RAP3-222ENST00000581708 USMG5Q96IX5 58 aa9.74□□□□□ -0.85
CDK5RAP3-222ENST00000581708 SCOCQ9UIL1 159 aa9.74□□□□□ -0.85
CDK5RAP3-222ENST00000581708 C13orf42A0A1B0GVH6 325 aa9.73□□□□□ -0.85
CDK5RAP3-222ENST00000581708 RBFOX2O43251 390 aaKnown RBP eCLIP9.73□□□□□ -0.853e-11■□□□□ 9.1
CDK5RAP3-222ENST00000581708 ACTL6BO94805 426 aa9.73□□□□□ -0.85
CDK5RAP3-222ENST00000581708 ZP3P21754 424 aa9.73□□□□□ -0.85
CDK5RAP3-222ENST00000581708 EIF4EBP1Q13541 118 aaPredicted RBP9.73□□□□□ -0.85
CDK5RAP3-222ENST00000581708 DEFB121Q5J5C9 76 aa9.73□□□□□ -0.85
CDK5RAP3-222ENST00000581708 FAM209BQ5JX69 171 aa9.73□□□□□ -0.85
CDK5RAP3-222ENST00000581708 OR5AP2Q8NGF4 316 aa9.73□□□□□ -0.85
CDK5RAP3-222ENST00000581708 ACOT12Q8WYK0 555 aa9.73□□□□□ -0.85
CDK5RAP3-222ENST00000581708 OR5B12Q96R08 314 aa9.73□□□□□ -0.85
CDK5RAP3-222ENST00000581708 SPIN2AQ99865 258 aa9.73□□□□□ -0.85
CDK5RAP3-222ENST00000581708 B9D2Q9BPU9 175 aa9.73□□□□□ -0.85
CDK5RAP3-222ENST00000581708 SPIN2BQ9BPZ2 258 aa9.73□□□□□ -0.85
CDK5RAP3-222ENST00000581708 DCUN1D5Q9BTE7 237 aa9.73□□□□□ -0.85
CDK5RAP3-222ENST00000581708 TINAGL1Q9GZM7 467 aaPredicted RBP9.73□□□□□ -0.85
CDK5RAP3-222ENST00000581708 RANGRFQ9HD47 186 aaPredicted RBP9.73□□□□□ -0.85
CDK5RAP3-222ENST00000581708 TNCP24821 2201 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms