RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 RFX2P48378 723 aa15.71■□□□□ 0.11
SS18-218ENST00000581021 KIAA0141Q14154 515 aaPredicted RBP15.71■□□□□ 0.11
SS18-218ENST00000581021 RTL8BQ17RB0 113 aa15.71■□□□□ 0.11
SS18-218ENST00000581021 ECSCRQ19T08 205 aa15.71■□□□□ 0.11
SS18-218ENST00000581021 SAMD5Q5TGI4 173 aa15.71■□□□□ 0.11
SS18-218ENST00000581021 OVCH2Q7RTZ1 564 aa15.71■□□□□ 0.11
SS18-218ENST00000581021 LYSMD2Q8IV50 215 aa15.71■□□□□ 0.11
SS18-218ENST00000581021 MINDY2Q8NBR6 621 aa15.71■□□□□ 0.11
SS18-218ENST00000581021 KLHL30-AS1Q8NEE0 82 aa15.71■□□□□ 0.11
SS18-218ENST00000581021 RAB2BQ8WUD1 216 aa15.71■□□□□ 0.11
SS18-218ENST00000581021 GON7Q9BXV9 100 aa15.71■□□□□ 0.11
SS18-218ENST00000581021 TAS2R8Q9NYW2 309 aa15.71■□□□□ 0.11
SS18-218ENST00000581021 A3GALT2U3KPV4 340 aa15.71■□□□□ 0.11
SS18-218ENST00000581021 PRKDCP78527 4128 aaKnown RBP15.7■□□□□ 0.1
SS18-218ENST00000581021 DNAH3Q8TD57 4116 aa15.7■□□□□ 0.1
SS18-218ENST00000581021 PMP2P02689 132 aa15.7■□□□□ 0.1
SS18-218ENST00000581021 DEFA6Q01524 100 aa15.7■□□□□ 0.1
SS18-218ENST00000581021 TAGLNQ01995 201 aaKnown RBP15.7■□□□□ 0.1
SS18-218ENST00000581021 CXorf66Q5JRM2 361 aaPredicted RBP15.7■□□□□ 0.1
SS18-218ENST00000581021 KCTD9Q7L273 389 aa15.7■□□□□ 0.1
SS18-218ENST00000581021 DYNC2LI1Q8TCX1 351 aa15.7■□□□□ 0.1
SS18-218ENST00000581021 CASTOR1Q8WTX7 329 aa15.7■□□□□ 0.1
SS18-218ENST00000581021 SECTM1Q8WVN6 248 aa15.7■□□□□ 0.1
SS18-218ENST00000581021 AP3S1Q92572 193 aa15.7■□□□□ 0.1
SS18-218ENST00000581021 DUX3Q96PT4 197 aa15.7■□□□□ 0.1
SS18-218ENST00000581021 ZFP57Q9NU63 452 aa15.7■□□□□ 0.1
SS18-218ENST00000581021 EHFQ9NZC4 300 aa15.7■□□□□ 0.1
SS18-218ENST00000581021 NUBP2Q9Y5Y2 271 aa15.7■□□□□ 0.1
SS18-218ENST00000581021 H3BMQ9 156 aa15.69■□□□□ 0.1
SS18-218ENST00000581021 SHOXO15266 292 aa15.69■□□□□ 0.1
SS18-218ENST00000581021 TNFSF12O43508 249 aa15.69■□□□□ 0.1
SS18-218ENST00000581021 FCGR3BO75015 233 aa15.69■□□□□ 0.1
SS18-218ENST00000581021 LGALS7P47929 136 aa15.69■□□□□ 0.1
SS18-218ENST00000581021 TMBIM6P55061 237 aa15.69■□□□□ 0.1
SS18-218ENST00000581021 FXYD4P59646 89 aa15.69■□□□□ 0.1
SS18-218ENST00000581021 DEFB136Q30KP8 78 aa15.69■□□□□ 0.1
SS18-218ENST00000581021 OXLD1Q5BKU9 147 aa15.69■□□□□ 0.1
SS18-218ENST00000581021 MZT2AQ6P582 158 aa15.69■□□□□ 0.1
SS18-218ENST00000581021 ZNF562Q6V9R5 426 aa15.69■□□□□ 0.1
SS18-218ENST00000581021 IDO2Q6ZQW0 420 aa15.69■□□□□ 0.1
SS18-218ENST00000581021 PPP1R27Q86WC6 154 aa15.69■□□□□ 0.1
SS18-218ENST00000581021 ZNF695Q8IW36 515 aa15.69■□□□□ 0.1
SS18-218ENST00000581021 LAX1Q8IWV1 398 aa15.69■□□□□ 0.1
SS18-218ENST00000581021 LINC00482Q8N8I6 264 aa15.69■□□□□ 0.1
SS18-218ENST00000581021 WFDC9Q8NEX5 89 aa15.69■□□□□ 0.1
SS18-218ENST00000581021 GIMAP1Q8WWP7 306 aa15.69■□□□□ 0.1
SS18-218ENST00000581021 NUDT19A8MXV4 375 aa15.68■□□□□ 0.1
SS18-218ENST00000581021 FAM25AB3EWG3 89 aa15.68■□□□□ 0.1
SS18-218ENST00000581021 FAM25CB3EWG5 89 aa15.68■□□□□ 0.1
SS18-218ENST00000581021 FAM25GB3EWG6 89 aa15.68■□□□□ 0.1
SS18-218ENST00000581021 CTDSP2O14595 271 aa15.68■□□□□ 0.1
SS18-218ENST00000581021 SLC22A5O76082 557 aa15.68■□□□□ 0.1
SS18-218ENST00000581021 RRASP10301 218 aa15.68■□□□□ 0.1
SS18-218ENST00000581021 HLA-DMAP28067 261 aa15.68■□□□□ 0.1
SS18-218ENST00000581021 DYRK1AQ13627 763 aa15.68■□□□□ 0.1
SS18-218ENST00000581021 BEAN1Q3B7T3 259 aa15.68■□□□□ 0.1
SS18-218ENST00000581021 RNASE12Q5GAN4 147 aaKnown RBP15.68■□□□□ 0.1
SS18-218ENST00000581021 MRPL41Q8IXM3 137 aaKnown RBP15.68■□□□□ 0.1
SS18-218ENST00000581021 ABHD5Q8WTS1 349 aa15.68■□□□□ 0.1
SS18-218ENST00000581021 ARPC1AQ92747 370 aa15.68■□□□□ 0.1
SS18-218ENST00000581021 ISOC1Q96CN7 298 aa15.68■□□□□ 0.1
SS18-218ENST00000581021 RAX2Q96IS3 184 aa15.68■□□□□ 0.1
SS18-218ENST00000581021 SLC5A7Q9GZV3 580 aa15.68■□□□□ 0.1
SS18-218ENST00000581021 SCPEP1Q9HB40 452 aa15.68■□□□□ 0.1
SS18-218ENST00000581021 EXTL2Q9UBQ6 330 aa15.68■□□□□ 0.1
SS18-218ENST00000581021 ADAM30Q9UKF2 790 aa15.68■□□□□ 0.1
SS18-218ENST00000581021 SMIM31A0A1B0GVY4 71 aa15.67■□□□□ 0.1
SS18-218ENST00000581021 WIPF1O43516 503 aa15.67■□□□□ 0.1
SS18-218ENST00000581021 PF4P02776 101 aa15.67■□□□□ 0.1
SS18-218ENST00000581021 HRH1P35367 487 aa15.67■□□□□ 0.1
SS18-218ENST00000581021 UBE2KP61086 200 aa15.67■□□□□ 0.1
SS18-218ENST00000581021 GNB1P62873 340 aa15.67■□□□□ 0.1
SS18-218ENST00000581021 FXYD3Q14802 87 aa15.67■□□□□ 0.1
SS18-218ENST00000581021 DHRS11Q6UWP2 260 aa15.67■□□□□ 0.1
SS18-218ENST00000581021 ZNF818PQ6ZRF7 136 aa15.67■□□□□ 0.1
SS18-218ENST00000581021 TMEM17Q86X19 198 aa15.67■□□□□ 0.1
SS18-218ENST00000581021 MFSD4AQ8N468 514 aa15.67■□□□□ 0.1
SS18-218ENST00000581021 LFNGQ8NES3 379 aa15.67■□□□□ 0.1
SS18-218ENST00000581021 OR5H2Q8NGV7 314 aa15.67■□□□□ 0.1
SS18-218ENST00000581021 GRPEL2Q8TAA5 225 aa15.67■□□□□ 0.1
SS18-218ENST00000581021 TCTEX1D2Q8WW35 142 aa15.67■□□□□ 0.1
SS18-218ENST00000581021 ABHD1Q96SE0 405 aa15.67■□□□□ 0.1
SS18-218ENST00000581021 P2RX4Q99571 388 aa15.67■□□□□ 0.1
SS18-218ENST00000581021 HSD17B10Q99714 261 aaKnown RBP15.67■□□□□ 0.1
SS18-218ENST00000581021 BCL7BQ9BQE9 202 aa15.67■□□□□ 0.1
SS18-218ENST00000581021 FXYD6Q9H0Q3 95 aa15.67■□□□□ 0.1
SS18-218ENST00000581021 GNB4Q9HAV0 340 aa15.67■□□□□ 0.1
SS18-218ENST00000581021 CCDC59Q9P031 241 aaKnown RBP15.67■□□□□ 0.1
SS18-218ENST00000581021 CEPT1Q9Y6K0 416 aa15.67■□□□□ 0.1
SS18-218ENST00000581021 TNCP24821 2201 aa15.66■□□□□ 0.1
SS18-218ENST00000581021 A0A1W2PN81 502 aa15.66■□□□□ 0.1
SS18-218ENST00000581021 SAA1P0DJI8 122 aaPredicted RBP15.66■□□□□ 0.1
SS18-218ENST00000581021 CHRNA7P36544 502 aa15.66■□□□□ 0.1
SS18-218ENST00000581021 CDX1P47902 265 aaPredicted RBP15.66■□□□□ 0.1
SS18-218ENST00000581021 TAS2R46P59540 309 aa15.66■□□□□ 0.1
SS18-218ENST00000581021 CBX3Q13185 183 aa15.66■□□□□ 0.1
SS18-218ENST00000581021 MSMO1Q15800 293 aa15.66■□□□□ 0.1
SS18-218ENST00000581021 KPRPQ5T749 579 aaPredicted RBP15.66■□□□□ 0.1
SS18-218ENST00000581021 ASPHD1Q5U4P2 390 aa15.66■□□□□ 0.1
SS18-218ENST00000581021 VKORC1L1Q8N0U8 176 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms