RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 OR2D2Q9H210 308 aa13.61□□□□□ -0.23
MKS1-209ENST00000580127 DENRO43583 198 aaKnown RBP13.6□□□□□ -0.23
MKS1-209ENST00000580127 GADD45AP24522 165 aa13.6□□□□□ -0.23
MKS1-209ENST00000580127 CD81P60033 236 aa13.6□□□□□ -0.23
MKS1-209ENST00000580127 TNXAQ16473 311 aa13.6□□□□□ -0.23
MKS1-209ENST00000580127 C2orf76Q3KRA6 126 aa13.6□□□□□ -0.23
MKS1-209ENST00000580127 DYNLRB2Q8TF09 96 aa13.6□□□□□ -0.23
MKS1-209ENST00000580127 TMEM203Q969S6 136 aa13.6□□□□□ -0.23
MKS1-209ENST00000580127 FAM3DQ96BQ1 224 aa13.6□□□□□ -0.23
MKS1-209ENST00000580127 KCTD12Q96CX2 325 aaKnown RBP13.6□□□□□ -0.23
MKS1-209ENST00000580127 SPIN2AQ99865 258 aa13.6□□□□□ -0.23
MKS1-209ENST00000580127 SPIN2BQ9BPZ2 258 aa13.6□□□□□ -0.23
MKS1-209ENST00000580127 GINS4Q9BRT9 223 aa13.6□□□□□ -0.23
MKS1-209ENST00000580127 THAP7Q9BT49 309 aaPredicted RBP13.6□□□□□ -0.23
MKS1-209ENST00000580127 SDHAF2Q9NX18 166 aa13.6□□□□□ -0.23
MKS1-209ENST00000580127 RAB22AQ9UL26 194 aa13.6□□□□□ -0.23
MKS1-209ENST00000580127 IGKV1-6A0A0C4DH72 117 aa13.59□□□□□ -0.23
MKS1-209ENST00000580127 MAP2K4P45985 399 aa13.59□□□□□ -0.23
MKS1-209ENST00000580127 UBE2KP61086 200 aa13.59□□□□□ -0.23
MKS1-209ENST00000580127 RHOGP84095 191 aa13.59□□□□□ -0.23
MKS1-209ENST00000580127 DYRK1AQ13627 763 aa13.59□□□□□ -0.23
MKS1-209ENST00000580127 PRSS8Q16651 343 aa13.59□□□□□ -0.23
MKS1-209ENST00000580127 LIPKQ5VXJ0 399 aa13.59□□□□□ -0.23
MKS1-209ENST00000580127 LAIR2Q6ISS4 152 aa13.59□□□□□ -0.23
MKS1-209ENST00000580127 SLC25A42Q86VD7 318 aa13.59□□□□□ -0.23
MKS1-209ENST00000580127 ADAD2Q8NCV1 583 aaKnown RBP13.59□□□□□ -0.23
MKS1-209ENST00000580127 ACOT12Q8WYK0 555 aa13.59□□□□□ -0.23
MKS1-209ENST00000580127 RAB3CQ96E17 227 aa13.59□□□□□ -0.23
MKS1-209ENST00000580127 NEURL2Q9BR09 285 aa13.59□□□□□ -0.23
MKS1-209ENST00000580127 HIPK2Q9H2X6 1198 aa13.59□□□□□ -0.23
MKS1-209ENST00000580127 TECRQ9NZ01 308 aaKnown RBP13.59□□□□□ -0.23
MKS1-209ENST00000580127 AK6Q9Y3D8 172 aaKnown RBP13.59□□□□□ -0.23
MKS1-209ENST00000580127 TRBV6-7A0A0A0MS04 114 aa13.58□□□□□ -0.24
MKS1-209ENST00000580127 SNRPBP14678 240 aaKnown RBP13.58□□□□□ -0.24
MKS1-209ENST00000580127 TALDO1P37837 337 aa13.58□□□□□ -0.24
MKS1-209ENST00000580127 MECP2P51608 486 aaKnown RBP13.58□□□□□ -0.24
MKS1-209ENST00000580127 NECAP1Q8NC96 275 aa13.58□□□□□ -0.24
MKS1-209ENST00000580127 OSR1Q8TAX0 266 aaPredicted RBP13.58□□□□□ -0.24
MKS1-209ENST00000580127 V9GY05 133 aa13.58□□□□□ -0.24
MKS1-209ENST00000580127 DNAH7Q8WXX0 4024 aa13.57□□□□□ -0.24
MKS1-209ENST00000580127 IZUMO1RA6ND01 250 aa13.57□□□□□ -0.24
MKS1-209ENST00000580127 FOXI3A8MTJ6 420 aaPredicted RBP13.57□□□□□ -0.24
MKS1-209ENST00000580127 HSMCR30P0CW71 290 aa13.57□□□□□ -0.24
MKS1-209ENST00000580127 APELAP0DMC3 54 aa13.57□□□□□ -0.24
MKS1-209ENST00000580127 SSBP2P81877 361 aaPredicted RBP13.57□□□□□ -0.24
MKS1-209ENST00000580127 GUCA2BQ16661 112 aa13.57□□□□□ -0.24
MKS1-209ENST00000580127 CD300EQ496F6 205 aaPredicted RBP13.57□□□□□ -0.24
MKS1-209ENST00000580127 IGSF11Q5DX21 431 aa13.57□□□□□ -0.24
MKS1-209ENST00000580127 SRSF12Q8WXF0 261 aaKnown RBP13.57□□□□□ -0.24
MKS1-209ENST00000580127 DCUN1D5Q9BTE7 237 aa13.57□□□□□ -0.24
MKS1-209ENST00000580127 PLEKHA3Q9HB20 300 aa13.57□□□□□ -0.24
MKS1-209ENST00000580127 AKIP1Q9NQ31 210 aa13.57□□□□□ -0.24
MKS1-209ENST00000580127 TPRKBQ9Y3C4 175 aa13.57□□□□□ -0.24
MKS1-209ENST00000580127 SRRM4A7MD48 611 aaKnown RBP13.56□□□□□ -0.24
MKS1-209ENST00000580127 OR11H12B2RN74 326 aa13.56□□□□□ -0.24
MKS1-209ENST00000580127 CRYZL1O95825 349 aa13.56□□□□□ -0.24
MKS1-209ENST00000580127 TRBV12-3P01733 135 aa13.56□□□□□ -0.24
MKS1-209ENST00000580127 GSTT2P0CG29 244 aa13.56□□□□□ -0.24
MKS1-209ENST00000580127 GSTT2BP0CG30 244 aa13.56□□□□□ -0.24
MKS1-209ENST00000580127 EXOSC2Q13868 293 aaKnown RBP13.56□□□□□ -0.24
MKS1-209ENST00000580127 RCN1Q15293 331 aa13.56□□□□□ -0.24
MKS1-209ENST00000580127 PLAC9Q5JTB6 97 aa13.56□□□□□ -0.24
MKS1-209ENST00000580127 LINC00322Q6ZN03 302 aaPredicted RBP13.56□□□□□ -0.24
MKS1-209ENST00000580127 SLC16A13Q7RTY0 426 aa13.56□□□□□ -0.24
MKS1-209ENST00000580127 MMD2Q8IY49 270 aa13.56□□□□□ -0.24
MKS1-209ENST00000580127 CABLES2Q9BTV7 478 aa13.56□□□□□ -0.24
MKS1-209ENST00000580127 ADAM30Q9UKF2 790 aa13.56□□□□□ -0.24
MKS1-209ENST00000580127 LSM2Q9Y333 95 aaKnown RBP13.56□□□□□ -0.24
MKS1-209ENST00000580127 PRELID3BQ9Y3B1 194 aa13.56□□□□□ -0.24
MKS1-209ENST00000580127 RYR2Q92736 4967 aa13.55□□□□□ -0.24
MKS1-209ENST00000580127 DYNC2H1Q8NCM8 4307 aaKnown RBP13.55□□□□□ -0.24
MKS1-209ENST00000580127 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.55□□□□□ -0.24
MKS1-209ENST00000580127 METTL21EPA6NDL7 271 aa13.55□□□□□ -0.24
MKS1-209ENST00000580127 PDCD5O14737 125 aa13.55□□□□□ -0.24
MKS1-209ENST00000580127 SLC22A5O76082 557 aa13.55□□□□□ -0.24
MKS1-209ENST00000580127 FCGR3AP08637 254 aa13.55□□□□□ -0.24
MKS1-209ENST00000580127 CALRP27797 417 aaKnown RBP13.55□□□□□ -0.24
MKS1-209ENST00000580127 DEFA5Q01523 94 aa13.55□□□□□ -0.24
MKS1-209ENST00000580127 ARFRP1Q13795 201 aa13.55□□□□□ -0.24
MKS1-209ENST00000580127 ARL6IP1Q15041 203 aa13.55□□□□□ -0.24
MKS1-209ENST00000580127 SSX1Q16384 188 aa13.55□□□□□ -0.24
MKS1-209ENST00000580127 DEFB114Q30KQ6 69 aa13.55□□□□□ -0.24
MKS1-209ENST00000580127 TTC9CQ8N5M4 171 aa13.55□□□□□ -0.24
MKS1-209ENST00000580127 ACOT13Q9NPJ3 140 aa13.55□□□□□ -0.24
MKS1-209ENST00000580127 TRBV9A0A0B4J1U6 114 aa13.54□□□□□ -0.24
MKS1-209ENST00000580127 DPPA5A6NC42 116 aa13.54□□□□□ -0.24
MKS1-209ENST00000580127 ZNF785A8K8V0 405 aa13.54□□□□□ -0.24
MKS1-209ENST00000580127 BMPR1BO00238 502 aa13.54□□□□□ -0.24
MKS1-209ENST00000580127 GGCTO75223 188 aaKnown RBP13.54□□□□□ -0.24
MKS1-209ENST00000580127 DHFRP00374 187 aa13.54□□□□□ -0.24
MKS1-209ENST00000580127 DUTP33316 252 aaKnown RBP13.54□□□□□ -0.24
MKS1-209ENST00000580127 KIR2DS2P43631 304 aa13.54□□□□□ -0.24
MKS1-209ENST00000580127 CLDN12P56749 244 aa13.54□□□□□ -0.24
MKS1-209ENST00000580127 CDK10Q15131 360 aa13.54□□□□□ -0.24
MKS1-209ENST00000580127 ANKRD55Q3KP44 614 aa13.54□□□□□ -0.24
MKS1-209ENST00000580127 TMEM91Q6ZNR0 172 aa13.54□□□□□ -0.24
MKS1-209ENST00000580127 OR10R2Q8NGX6 335 aa13.54□□□□□ -0.24
MKS1-209ENST00000580127 SRD5A3Q9H8P0 318 aa13.54□□□□□ -0.24
MKS1-209ENST00000580127 ZNF230Q9UIE0 474 aaPredicted RBP13.54□□□□□ -0.24
MKS1-209ENST00000580127 MRPS7Q9Y2R9 242 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms