RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 MGAT4AQ9UM21 535 aa10.4□□□□□ -0.74
TRAF4-214ENST00000580073 ZNF736B4DX44 427 aaPredicted RBP10.39□□□□□ -0.75
TRAF4-214ENST00000580073 RGS5O15539 181 aa10.39□□□□□ -0.75
TRAF4-214ENST00000580073 IGLV1-40P01703 118 aa10.39□□□□□ -0.75
TRAF4-214ENST00000580073 OR8U9P0C7N5 309 aa10.39□□□□□ -0.75
TRAF4-214ENST00000580073 CD40LGP29965 261 aa10.39□□□□□ -0.75
TRAF4-214ENST00000580073 TNFSF8P32971 234 aa10.39□□□□□ -0.75
TRAF4-214ENST00000580073 ACTBP60709 375 aa10.39□□□□□ -0.75
TRAF4-214ENST00000580073 PITPNAQ00169 270 aa10.39□□□□□ -0.75
TRAF4-214ENST00000580073 LYSMD2Q8IV50 215 aa10.39□□□□□ -0.75
TRAF4-214ENST00000580073 MCFD2Q8NI22 146 aa10.39□□□□□ -0.75
TRAF4-214ENST00000580073 ABHD14BQ96IU4 210 aa10.39□□□□□ -0.75
TRAF4-214ENST00000580073 SOSTQ9BQB4 213 aa10.39□□□□□ -0.75
TRAF4-214ENST00000580073 C6orf62Q9GZU0 229 aaPredicted RBP10.39□□□□□ -0.75
TRAF4-214ENST00000580073 RDH8Q9NYR8 311 aa10.39□□□□□ -0.75
TRAF4-214ENST00000580073 ANXA10Q9UJ72 324 aa10.39□□□□□ -0.75
TRAF4-214ENST00000580073 RNF150Q9ULK6 438 aa10.39□□□□□ -0.75
TRAF4-214ENST00000580073 LINC01619G3V211 115 aa10.38□□□□□ -0.75
TRAF4-214ENST00000580073 NAT1P18440 290 aa10.38□□□□□ -0.75
TRAF4-214ENST00000580073 ZBTB25P24278 435 aa10.38□□□□□ -0.75
TRAF4-214ENST00000580073 PPIFP30405 207 aaKnown RBP10.38□□□□□ -0.75
TRAF4-214ENST00000580073 PRSS3P35030 304 aa10.38□□□□□ -0.75
TRAF4-214ENST00000580073 RAB9AP51151 201 aa10.38□□□□□ -0.75
TRAF4-214ENST00000580073 LINC00205P59089 165 aa10.38□□□□□ -0.75
TRAF4-214ENST00000580073 TMEM267Q0VDI3 215 aaPredicted RBP10.38□□□□□ -0.75
TRAF4-214ENST00000580073 C5orf64Q2M2E5 130 aa10.38□□□□□ -0.75
TRAF4-214ENST00000580073 RPL39P5Q59GN2 51 aa10.38□□□□□ -0.75
TRAF4-214ENST00000580073 RNASE12Q5GAN4 147 aaKnown RBP10.38□□□□□ -0.75
TRAF4-214ENST00000580073 CASC10Q5T4H9 136 aa10.38□□□□□ -0.75
TRAF4-214ENST00000580073 H1FOOQ8IZA3 346 aaPredicted RBP10.38□□□□□ -0.75
TRAF4-214ENST00000580073 BEST4Q8NFU0 473 aa10.38□□□□□ -0.75
TRAF4-214ENST00000580073 OR2AK2Q8NG84 335 aa10.38□□□□□ -0.75
TRAF4-214ENST00000580073 FLYWCH2Q96CP2 140 aaKnown RBP10.38□□□□□ -0.75
TRAF4-214ENST00000580073 GNB4Q9HAV0 340 aa10.38□□□□□ -0.75
TRAF4-214ENST00000580073 FOXA2Q9Y261 457 aaPredicted RBP10.38□□□□□ -0.75
TRAF4-214ENST00000580073 SAA2-SAA4A0A096LPE2 208 aa10.37□□□□□ -0.75
TRAF4-214ENST00000580073 ITGB1BP1O14713 200 aa10.37□□□□□ -0.75
TRAF4-214ENST00000580073 LGALS1P09382 135 aaKnown RBP10.37□□□□□ -0.75
TRAF4-214ENST00000580073 SAA2P0DJI9 122 aaPredicted RBP10.37□□□□□ -0.75
TRAF4-214ENST00000580073 LYL1P12980 280 aa10.37□□□□□ -0.75
TRAF4-214ENST00000580073 GP9P14770 177 aa10.37□□□□□ -0.75
TRAF4-214ENST00000580073 NFYAP23511 347 aaPredicted RBP10.37□□□□□ -0.75
TRAF4-214ENST00000580073 CRIP2P52943 208 aaPredicted RBP10.37□□□□□ -0.75
TRAF4-214ENST00000580073 PLGLAQ15195 96 aa10.37□□□□□ -0.75
TRAF4-214ENST00000580073 ECSCRQ19T08 205 aa10.37□□□□□ -0.75
TRAF4-214ENST00000580073 LIN54Q6MZP7 749 aa10.37□□□□□ -0.75
TRAF4-214ENST00000580073 OR52I2Q8NH67 350 aa10.37□□□□□ -0.75
TRAF4-214ENST00000580073 MRPL20Q9BYC9 149 aaKnown RBP10.37□□□□□ -0.75
TRAF4-214ENST00000580073 NDUFA13Q9P0J0 144 aa10.37□□□□□ -0.75
TRAF4-214ENST00000580073 PIPOXQ9P0Z9 390 aa10.37□□□□□ -0.75
TRAF4-214ENST00000580073 ADAM30Q9UKF2 790 aa10.37□□□□□ -0.75
TRAF4-214ENST00000580073 WSB1Q9Y6I7 421 aa10.37□□□□□ -0.75
TRAF4-214ENST00000580073 STAB2Q8WWQ8 2551 aa10.36□□□□□ -0.75
TRAF4-214ENST00000580073 IGHV7-81A0A0B4J1V7 117 aa10.36□□□□□ -0.75
TRAF4-214ENST00000580073 IGKV1D-13A0A0B4J2D9 117 aa10.36□□□□□ -0.75
TRAF4-214ENST00000580073 A0A1W2PN81 502 aa10.36□□□□□ -0.75
TRAF4-214ENST00000580073 OR5H14A6NHG9 310 aa10.36□□□□□ -0.75
TRAF4-214ENST00000580073 G3V318 75 aa10.36□□□□□ -0.75
TRAF4-214ENST00000580073 J3QRK9 145 aa10.36□□□□□ -0.75
TRAF4-214ENST00000580073 HSPA12AO43301 675 aa10.36□□□□□ -0.75
TRAF4-214ENST00000580073 RBBP9O75884 186 aa10.36□□□□□ -0.75
TRAF4-214ENST00000580073 NDUFA3O95167 84 aa10.36□□□□□ -0.75
TRAF4-214ENST00000580073 IGKV1-13P0DP09 117 aa10.36□□□□□ -0.75
TRAF4-214ENST00000580073 CHRNA7P36544 502 aa10.36□□□□□ -0.75
TRAF4-214ENST00000580073 GNB1P62873 340 aa10.36□□□□□ -0.75
TRAF4-214ENST00000580073 ASPHD1Q5U4P2 390 aa10.36□□□□□ -0.75
TRAF4-214ENST00000580073 ZNF660Q6AZW8 331 aaPredicted RBP10.36□□□□□ -0.75
TRAF4-214ENST00000580073 ZNF833PQ6ZTB9 187 aa10.36□□□□□ -0.75
TRAF4-214ENST00000580073 NPBQ8NG41 125 aa10.36□□□□□ -0.75
TRAF4-214ENST00000580073 OR10J5Q8NHC4 309 aa10.36□□□□□ -0.75
TRAF4-214ENST00000580073 ABHD5Q8WTS1 349 aa10.36□□□□□ -0.75
TRAF4-214ENST00000580073 DCUN1D4Q92564 292 aa10.36□□□□□ -0.75
TRAF4-214ENST00000580073 DIRAS2Q96HU8 199 aa10.36□□□□□ -0.75
TRAF4-214ENST00000580073 OR5B12Q96R08 314 aa10.36□□□□□ -0.75
TRAF4-214ENST00000580073 OR4C12Q96R67 309 aa10.36□□□□□ -0.75
TRAF4-214ENST00000580073 NABP2Q9BQ15 211 aa10.36□□□□□ -0.75
TRAF4-214ENST00000580073 ELOVL1Q9BW60 279 aa10.36□□□□□ -0.75
TRAF4-214ENST00000580073 KLK11Q9UBX7 282 aa10.36□□□□□ -0.75
TRAF4-214ENST00000580073 RAB29O14966 203 aa10.35□□□□□ -0.75
TRAF4-214ENST00000580073 TUSC2O75896 110 aa10.35□□□□□ -0.75
TRAF4-214ENST00000580073 DIRAS3O95661 229 aa10.35□□□□□ -0.75
TRAF4-214ENST00000580073 IGLV2-14P01704 120 aa10.35□□□□□ -0.75
TRAF4-214ENST00000580073 PMP2P02689 132 aa10.35□□□□□ -0.75
TRAF4-214ENST00000580073 FRMD6-AS1P0C7T7 363 aa10.35□□□□□ -0.75
TRAF4-214ENST00000580073 CT45A6P0DMU7 189 aa10.35□□□□□ -0.75
TRAF4-214ENST00000580073 CT45A5P0DMU8 189 aa10.35□□□□□ -0.75
TRAF4-214ENST00000580073 CT45A7P0DMV0 189 aa10.35□□□□□ -0.75
TRAF4-214ENST00000580073 MC5RP33032 325 aa10.35□□□□□ -0.75
TRAF4-214ENST00000580073 CBX5P45973 191 aa10.35□□□□□ -0.75
TRAF4-214ENST00000580073 RFX2P48378 723 aa10.35□□□□□ -0.75
TRAF4-214ENST00000580073 CCDC190Q86UF4 302 aa10.35□□□□□ -0.75
TRAF4-214ENST00000580073 MINDY2Q8NBR6 621 aa10.35□□□□□ -0.75
TRAF4-214ENST00000580073 OR5AP2Q8NGF4 316 aa10.35□□□□□ -0.75
TRAF4-214ENST00000580073 RITA1Q96K30 269 aa10.35□□□□□ -0.75
TRAF4-214ENST00000580073 KLK15Q9H2R5 256 aa10.35□□□□□ -0.75
TRAF4-214ENST00000580073 SLA2Q9H6Q3 261 aa10.35□□□□□ -0.75
TRAF4-214ENST00000580073 SCPEP1Q9HB40 452 aa10.35□□□□□ -0.75
TRAF4-214ENST00000580073 A3GALT2U3KPV4 340 aa10.35□□□□□ -0.75
TRAF4-214ENST00000580073 V9GYH0 126 aa10.35□□□□□ -0.75
TRAF4-214ENST00000580073 SULT1C2O00338 296 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms