RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 ZNF562Q6V9R5 426 aa11.32□□□□□ -0.6
MKS1-207ENST00000578789 ZNF66Q6ZN08 573 aa11.32□□□□□ -0.6
MKS1-207ENST00000578789 KCTD9Q7L273 389 aa11.32□□□□□ -0.6
MKS1-207ENST00000578789 OSR1Q8TAX0 266 aaPredicted RBP11.32□□□□□ -0.6
MKS1-207ENST00000578789 DYNC2LI1Q8TCX1 351 aa11.32□□□□□ -0.6
MKS1-207ENST00000578789 MYOZ3Q8TDC0 251 aa11.32□□□□□ -0.6
MKS1-207ENST00000578789 HSD17B10Q99714 261 aaKnown RBP11.32□□□□□ -0.6
MKS1-207ENST00000578789 MRPS7Q9Y2R9 242 aaKnown RBP11.32□□□□□ -0.6
MKS1-207ENST00000578789 SRRM4A7MD48 611 aaKnown RBP11.31□□□□□ -0.6
MKS1-207ENST00000578789 G3V318 75 aa11.31□□□□□ -0.6
MKS1-207ENST00000578789 SHOXO15266 292 aa11.31□□□□□ -0.6
MKS1-207ENST00000578789 NOL3O60936 208 aaKnown RBP11.31□□□□□ -0.6
MKS1-207ENST00000578789 CRYZL1O95825 349 aa11.31□□□□□ -0.6
MKS1-207ENST00000578789 IGLV1-40P01703 118 aa11.31□□□□□ -0.6
MKS1-207ENST00000578789 RPLP1P05386 114 aaKnown RBP11.31□□□□□ -0.6
MKS1-207ENST00000578789 EGR2P11161 476 aaPredicted RBP11.31□□□□□ -0.6
MKS1-207ENST00000578789 RCVRNP35243 200 aa11.31□□□□□ -0.6
MKS1-207ENST00000578789 SSBP2P81877 361 aaPredicted RBP11.31□□□□□ -0.6
MKS1-207ENST00000578789 DYRK1AQ13627 763 aa11.31□□□□□ -0.6
MKS1-207ENST00000578789 ETV3LQ6ZN32 361 aa11.31□□□□□ -0.6
MKS1-207ENST00000578789 PPP1R27Q86WC6 154 aa11.31□□□□□ -0.6
MKS1-207ENST00000578789 SNX29P2Q8IUI4 249 aa11.31□□□□□ -0.6
MKS1-207ENST00000578789 TCTEX1D1Q8N7M0 179 aa11.31□□□□□ -0.6
MKS1-207ENST00000578789 MINDY2Q8NBR6 621 aa11.31□□□□□ -0.6
MKS1-207ENST00000578789 ZBTB34Q8NCN2 500 aa11.31□□□□□ -0.6
MKS1-207ENST00000578789 OR5H2Q8NGV7 314 aa11.31□□□□□ -0.6
MKS1-207ENST00000578789 SECTM1Q8WVN6 248 aa11.31□□□□□ -0.6
MKS1-207ENST00000578789 ISOC1Q96CN7 298 aa11.31□□□□□ -0.6
MKS1-207ENST00000578789 MIXL1Q9H2W2 232 aa11.31□□□□□ -0.6
MKS1-207ENST00000578789 EHFQ9NZC4 300 aa11.31□□□□□ -0.6
MKS1-207ENST00000578789 EXTL2Q9UBQ6 330 aa11.31□□□□□ -0.6
MKS1-207ENST00000578789 SCOCQ9UIL1 159 aa11.31□□□□□ -0.6
MKS1-207ENST00000578789 PRELID3BQ9Y3B1 194 aa11.31□□□□□ -0.6
MKS1-207ENST00000578789 WSB1Q9Y6I7 421 aa11.31□□□□□ -0.6
MKS1-207ENST00000578789 H3BMQ9 156 aa11.3□□□□□ -0.6
MKS1-207ENST00000578789 FCGR3BO75015 233 aa11.3□□□□□ -0.6
MKS1-207ENST00000578789 CDX1P47902 265 aaPredicted RBP11.3□□□□□ -0.6
MKS1-207ENST00000578789 UBE2KP61086 200 aa11.3□□□□□ -0.6
MKS1-207ENST00000578789 ECSCRQ19T08 205 aa11.3□□□□□ -0.6
MKS1-207ENST00000578789 VMA21Q3ZAQ7 101 aa11.3□□□□□ -0.6
MKS1-207ENST00000578789 DHRS11Q6UWP2 260 aa11.3□□□□□ -0.6
MKS1-207ENST00000578789 C18orf65Q6ZTR6 163 aa11.3□□□□□ -0.6
MKS1-207ENST00000578789 LYSMD2Q8IV50 215 aa11.3□□□□□ -0.6
MKS1-207ENST00000578789 TEX45Q8NA69 505 aa11.3□□□□□ -0.6
MKS1-207ENST00000578789 ARPC1AQ92747 370 aa11.3□□□□□ -0.6
MKS1-207ENST00000578789 MOB3AQ96BX8 217 aa11.3□□□□□ -0.6
MKS1-207ENST00000578789 CLCC1Q96S66 551 aa11.3□□□□□ -0.6
MKS1-207ENST00000578789 SLC5A7Q9GZV3 580 aa11.3□□□□□ -0.6
MKS1-207ENST00000578789 CCL28Q9NRJ3 127 aa11.3□□□□□ -0.6
MKS1-207ENST00000578789 NUBP2Q9Y5Y2 271 aa11.3□□□□□ -0.6
MKS1-207ENST00000578789 MEGF8Q7Z7M0 2845 aa11.3□□□□□ -0.6
MKS1-207ENST00000578789 ARPC1BO15143 372 aaKnown RBP11.29□□□□□ -0.6
MKS1-207ENST00000578789 PMP2P02689 132 aa11.29□□□□□ -0.6
MKS1-207ENST00000578789 PF4P02776 101 aa11.29□□□□□ -0.6
MKS1-207ENST00000578789 HRH1P35367 487 aa11.29□□□□□ -0.6
MKS1-207ENST00000578789 RFX2P48378 723 aa11.29□□□□□ -0.6
MKS1-207ENST00000578789 BRWD1-AS2P59051 145 aa11.29□□□□□ -0.6
MKS1-207ENST00000578789 FXYD4P59646 89 aa11.29□□□□□ -0.6
MKS1-207ENST00000578789 HERV-K104P61576 105 aa11.29□□□□□ -0.6
MKS1-207ENST00000578789 MRGPRG-AS1Q2M3A8 158 aa11.29□□□□□ -0.6
MKS1-207ENST00000578789 SAMD5Q5TGI4 173 aa11.29□□□□□ -0.6
MKS1-207ENST00000578789 LCNL1Q6ZST4 164 aa11.29□□□□□ -0.6
MKS1-207ENST00000578789 C8orf86Q6ZUL3 223 aa11.29□□□□□ -0.6
MKS1-207ENST00000578789 ZNF695Q8IW36 515 aa11.29□□□□□ -0.6
MKS1-207ENST00000578789 LAX1Q8IWV1 398 aa11.29□□□□□ -0.6
MKS1-207ENST00000578789 MFSD4AQ8N468 514 aa11.29□□□□□ -0.6
MKS1-207ENST00000578789 KLHL30-AS1Q8NEE0 82 aa11.29□□□□□ -0.6
MKS1-207ENST00000578789 WFDC9Q8NEX5 89 aa11.29□□□□□ -0.6
MKS1-207ENST00000578789 OR4S2Q8NH73 311 aa11.29□□□□□ -0.6
MKS1-207ENST00000578789 TCTEX1D2Q8WW35 142 aa11.29□□□□□ -0.6
MKS1-207ENST00000578789 ZNF2Q9BSG1 426 aaPredicted RBP11.29□□□□□ -0.6
MKS1-207ENST00000578789 TAS2R8Q9NYW2 309 aa11.29□□□□□ -0.6
MKS1-207ENST00000578789 FOXA2Q9Y261 457 aaPredicted RBP11.29□□□□□ -0.6
MKS1-207ENST00000578789 CEPT1Q9Y6K0 416 aa11.29□□□□□ -0.6
MKS1-207ENST00000578789 NUDT19A8MXV4 375 aa11.28□□□□□ -0.6
MKS1-207ENST00000578789 CTDSP2O14595 271 aa11.28□□□□□ -0.6
MKS1-207ENST00000578789 SOX15O60248 233 aa11.28□□□□□ -0.6
MKS1-207ENST00000578789 HLA-DMAP28067 261 aa11.28□□□□□ -0.6
MKS1-207ENST00000578789 KIR2DS2P43631 304 aa11.28□□□□□ -0.6
MKS1-207ENST00000578789 TMEM267Q0VDI3 215 aaPredicted RBP11.28□□□□□ -0.6
MKS1-207ENST00000578789 PJVKQ0ZLH3 352 aa11.28□□□□□ -0.6
MKS1-207ENST00000578789 KIAA0141Q14154 515 aaPredicted RBP11.28□□□□□ -0.6
MKS1-207ENST00000578789 FXYD3Q14802 87 aa11.28□□□□□ -0.6
MKS1-207ENST00000578789 AKIRIN2Q53H80 203 aa11.28□□□□□ -0.6
MKS1-207ENST00000578789 OR2B11Q5JQS5 317 aa11.28□□□□□ -0.6
MKS1-207ENST00000578789 ZNF818PQ6ZRF7 136 aa11.28□□□□□ -0.6
MKS1-207ENST00000578789 TMEM17Q86X19 198 aa11.28□□□□□ -0.6
MKS1-207ENST00000578789 LINC00482Q8N8I6 264 aa11.28□□□□□ -0.6
MKS1-207ENST00000578789 ABHD5Q8WTS1 349 aa11.28□□□□□ -0.6
MKS1-207ENST00000578789 C15orf40Q8WUR7 153 aa11.28□□□□□ -0.6
MKS1-207ENST00000578789 BORCS5Q969J3 196 aa11.28□□□□□ -0.6
MKS1-207ENST00000578789 FAM103A1Q9BTL3 118 aaKnown RBP11.28□□□□□ -0.6
MKS1-207ENST00000578789 SLIRPQ9GZT3 109 aaKnown RBP11.28□□□□□ -0.6
MKS1-207ENST00000578789 FXYD6Q9H0Q3 95 aa11.28□□□□□ -0.6
MKS1-207ENST00000578789 A0A1W2PN81 502 aa11.27□□□□□ -0.61
MKS1-207ENST00000578789 RGS5O15539 181 aa11.27□□□□□ -0.61
MKS1-207ENST00000578789 RBFOX2O43251 390 aaKnown RBP eCLIP11.27□□□□□ -0.61
MKS1-207ENST00000578789 SAA1P0DJI8 122 aaPredicted RBP11.27□□□□□ -0.61
MKS1-207ENST00000578789 GNRHRP30968 328 aa11.27□□□□□ -0.61
MKS1-207ENST00000578789 CHRNA7P36544 502 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms