RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 TFF3Q07654 80 aa7.73□□□□□ -1.17
CDK5RAP3-208ENST00000578525 FAM27E3Q08E93 113 aa7.73□□□□□ -1.17
CDK5RAP3-208ENST00000578525 PNRC1Q12796 327 aaPredicted RBP7.73□□□□□ -1.17
CDK5RAP3-208ENST00000578525 PDLIM3Q53GG5 364 aaPredicted RBP7.73□□□□□ -1.17
CDK5RAP3-208ENST00000578525 RPL39P5Q59GN2 51 aa7.73□□□□□ -1.17
CDK5RAP3-208ENST00000578525 SPINK9Q5DT21 86 aa7.73□□□□□ -1.17
CDK5RAP3-208ENST00000578525 FFAR4Q5NUL3 377 aa7.73□□□□□ -1.17
CDK5RAP3-208ENST00000578525 FAM201AQ5SY85 155 aa7.73□□□□□ -1.17
CDK5RAP3-208ENST00000578525 RBMS3Q6XE24 437 aaKnown RBP7.73□□□□□ -1.17
CDK5RAP3-208ENST00000578525 ZNF709Q8N972 641 aa7.73□□□□□ -1.17
CDK5RAP3-208ENST00000578525 ZNRF1Q8ND25 227 aa7.73□□□□□ -1.17
CDK5RAP3-208ENST00000578525 OR4A16Q8NH70 328 aa7.73□□□□□ -1.17
CDK5RAP3-208ENST00000578525 DDB2Q92466 427 aa7.73□□□□□ -1.17
CDK5RAP3-208ENST00000578525 ADTRPQ96IZ2 230 aa7.73□□□□□ -1.17
CDK5RAP3-208ENST00000578525 DIRC2Q96SL1 478 aa7.73□□□□□ -1.17
CDK5RAP3-208ENST00000578525 ACTR3CQ9C0K3 210 aaPredicted RBP7.73□□□□□ -1.17
CDK5RAP3-208ENST00000578525 FAM234AQ9H0X4 552 aa7.73□□□□□ -1.17
CDK5RAP3-208ENST00000578525 ELOVL5Q9NYP7 299 aa7.73□□□□□ -1.17
CDK5RAP3-208ENST00000578525 IDI2-AS1Q9NZ38 188 aa7.73□□□□□ -1.17
CDK5RAP3-208ENST00000578525 NCOR1O75376 2440 aa7.72□□□□□ -1.17
CDK5RAP3-208ENST00000578525 CXorf65A6NEN9 183 aa7.72□□□□□ -1.17
CDK5RAP3-208ENST00000578525 NKX6-3A6NJ46 265 aa7.72□□□□□ -1.17
CDK5RAP3-208ENST00000578525 ZNF729A6NN14 1252 aaPredicted RBP7.72□□□□□ -1.17
CDK5RAP3-208ENST00000578525 PRRG2O14669 202 aa7.72□□□□□ -1.17
CDK5RAP3-208ENST00000578525 SOX15O60248 233 aa7.72□□□□□ -1.17
CDK5RAP3-208ENST00000578525 CYB5R3P00387 301 aaPredicted RBP7.72□□□□□ -1.17
CDK5RAP3-208ENST00000578525 SELLP14151 372 aa7.72□□□□□ -1.17
CDK5RAP3-208ENST00000578525 IRF2P14316 349 aa7.72□□□□□ -1.17
CDK5RAP3-208ENST00000578525 NQO2P16083 231 aa7.72□□□□□ -1.17
CDK5RAP3-208ENST00000578525 VDAC2P45880 294 aaPredicted RBP7.72□□□□□ -1.17
CDK5RAP3-208ENST00000578525 RPS16P62249 146 aaKnown RBP7.72□□□□□ -1.17
CDK5RAP3-208ENST00000578525 RELBQ01201 579 aa7.72□□□□□ -1.17
CDK5RAP3-208ENST00000578525 ACOT6Q3I5F7 207 aaPredicted RBP7.72□□□□□ -1.17
CDK5RAP3-208ENST00000578525 TEX36Q5VZQ5 186 aa7.72□□□□□ -1.17
CDK5RAP3-208ENST00000578525 HEPN1Q6WQI6 88 aa7.72□□□□□ -1.17
CDK5RAP3-208ENST00000578525 ZNF788Q6ZQV5 615 aa7.72□□□□□ -1.17
CDK5RAP3-208ENST00000578525 SSX9Q7RTT3 188 aa7.72□□□□□ -1.17
CDK5RAP3-208ENST00000578525 C1QL4Q86Z23 238 aa7.72□□□□□ -1.17
CDK5RAP3-208ENST00000578525 RPP25LQ8N5L8 163 aaKnown RBP7.72□□□□□ -1.17
CDK5RAP3-208ENST00000578525 ZNF439Q8NDP4 499 aa7.72□□□□□ -1.17
CDK5RAP3-208ENST00000578525 OR10G9Q8NGN4 311 aa7.72□□□□□ -1.17
CDK5RAP3-208ENST00000578525 OR10G7Q8NGN6 311 aa7.72□□□□□ -1.17
CDK5RAP3-208ENST00000578525 OR4S2Q8NH73 311 aa7.72□□□□□ -1.17
CDK5RAP3-208ENST00000578525 CORO2AQ92828 525 aa7.72□□□□□ -1.17
CDK5RAP3-208ENST00000578525 PLPPR2Q96GM1 343 aa7.72□□□□□ -1.17
CDK5RAP3-208ENST00000578525 NPCDR1Q9BY65 106 aa7.72□□□□□ -1.17
CDK5RAP3-208ENST00000578525 SLC25A22Q9H936 323 aa7.72□□□□□ -1.17
CDK5RAP3-208ENST00000578525 GCM1Q9NP62 436 aa7.72□□□□□ -1.17
CDK5RAP3-208ENST00000578525 MANBALQ9NQG1 85 aa7.72□□□□□ -1.17
CDK5RAP3-208ENST00000578525 WDR83OSQ9Y284 106 aa7.72□□□□□ -1.17
CDK5RAP3-208ENST00000578525 ZNF318Q5VUA4 2279 aa7.72□□□□□ -1.17
CDK5RAP3-208ENST00000578525 ARID1AO14497 2285 aa7.71□□□□□ -1.17
CDK5RAP3-208ENST00000578525 TRGV8A0A0C4DH27 118 aa7.71□□□□□ -1.18
CDK5RAP3-208ENST00000578525 A0A0G2JNJ9 132 aa7.71□□□□□ -1.18
CDK5RAP3-208ENST00000578525 C5orf52A6NGY3 159 aa7.71□□□□□ -1.18
CDK5RAP3-208ENST00000578525 ZNF727A8MUV8 499 aa7.71□□□□□ -1.18
CDK5RAP3-208ENST00000578525 C16orf97H3BN30 126 aa7.71□□□□□ -1.18
CDK5RAP3-208ENST00000578525 UBE2CO00762 179 aa7.71□□□□□ -1.18
CDK5RAP3-208ENST00000578525 CYB5BO43169 146 aa7.71□□□□□ -1.18
CDK5RAP3-208ENST00000578525 S100A6P06703 90 aa7.71□□□□□ -1.18
CDK5RAP3-208ENST00000578525 BMP5P22003 454 aa7.71□□□□□ -1.18
CDK5RAP3-208ENST00000578525 ZNF134P52741 427 aa7.71□□□□□ -1.18
CDK5RAP3-208ENST00000578525 SNRPEP62304 92 aaKnown RBP7.71□□□□□ -1.18
CDK5RAP3-208ENST00000578525 MRPS11P82912 194 aaKnown RBP7.71□□□□□ -1.18
CDK5RAP3-208ENST00000578525 TLE1Q04724 770 aa7.71□□□□□ -1.18
CDK5RAP3-208ENST00000578525 CT45A1Q5HYN5 189 aa7.71□□□□□ -1.18
CDK5RAP3-208ENST00000578525 ADAM5Q6NVV9 412 aa7.71□□□□□ -1.18
CDK5RAP3-208ENST00000578525 TMEM108Q6UXF1 575 aa7.71□□□□□ -1.18
CDK5RAP3-208ENST00000578525 SSX8Q7RTT4 187 aa7.71□□□□□ -1.18
CDK5RAP3-208ENST00000578525 TCF23Q7RTU1 214 aa7.71□□□□□ -1.18
CDK5RAP3-208ENST00000578525 DOLPP1Q86YN1 238 aa7.71□□□□□ -1.18
CDK5RAP3-208ENST00000578525 WFDC8Q8IUA0 241 aa7.71□□□□□ -1.18
CDK5RAP3-208ENST00000578525 CT45A3Q8NHU0 189 aa7.71□□□□□ -1.18
CDK5RAP3-208ENST00000578525 CCL13Q99616 98 aa7.71□□□□□ -1.18
CDK5RAP3-208ENST00000578525 ZNF251Q9BRH9 671 aa7.71□□□□□ -1.18
CDK5RAP3-208ENST00000578525 GGACTQ9BVM4 153 aa7.71□□□□□ -1.18
CDK5RAP3-208ENST00000578525 LINC00574Q9H8X3 128 aa7.71□□□□□ -1.18
CDK5RAP3-208ENST00000578525 SDF2L1Q9HCN8 221 aa7.71□□□□□ -1.18
CDK5RAP3-208ENST00000578525 TMEM140Q9NV12 185 aa7.71□□□□□ -1.18
CDK5RAP3-208ENST00000578525 Q9UFV3 132 aa7.71□□□□□ -1.18
CDK5RAP3-208ENST00000578525 TCF19Q9Y242 345 aa7.71□□□□□ -1.18
CDK5RAP3-208ENST00000578525 TP53TG5Q9Y2B4 290 aa7.71□□□□□ -1.18
CDK5RAP3-208ENST00000578525 A0A1W2PPE3 182 aa7.7□□□□□ -1.18
CDK5RAP3-208ENST00000578525 ZNF98A6NK75 572 aa7.7□□□□□ -1.18
CDK5RAP3-208ENST00000578525 C15orf61A6NNL5 157 aa7.7□□□□□ -1.18
CDK5RAP3-208ENST00000578525 SEC14L6B5MCN3 397 aa7.7□□□□□ -1.18
CDK5RAP3-208ENST00000578525 IFNA10P01566 189 aa7.7□□□□□ -1.18
CDK5RAP3-208ENST00000578525 IGHV3-7P01780 117 aa7.7□□□□□ -1.18
CDK5RAP3-208ENST00000578525 GYPAP02724 150 aa7.7□□□□□ -1.18
CDK5RAP3-208ENST00000578525 CD1BP29016 333 aa7.7□□□□□ -1.18
CDK5RAP3-208ENST00000578525 PSMB3P49720 205 aa7.7□□□□□ -1.18
CDK5RAP3-208ENST00000578525 HNF4GQ14541 408 aa7.7□□□□□ -1.18
CDK5RAP3-208ENST00000578525 ELOBQ15370 118 aa7.7□□□□□ -1.18
CDK5RAP3-208ENST00000578525 DUX4L9Q6RFH8 374 aaPredicted RBP7.7□□□□□ -1.18
CDK5RAP3-208ENST00000578525 GFRALQ6UXV0 394 aa7.7□□□□□ -1.18
CDK5RAP3-208ENST00000578525 C22orf34Q6ZV56 151 aa7.7□□□□□ -1.18
CDK5RAP3-208ENST00000578525 FAM216BQ8N7L0 139 aa7.7□□□□□ -1.18
CDK5RAP3-208ENST00000578525 DEFB108BQ8NET1 73 aa7.7□□□□□ -1.18
CDK5RAP3-208ENST00000578525 LEAP2Q969E1 77 aa7.7□□□□□ -1.18
CDK5RAP3-208ENST00000578525 ABHD17AQ96GS6 310 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms