RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 IGHV3OR16-13A0A075B7E8 117 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 TRAV9-2A0A087WT02 112 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 IGHV3-74A0A0B4J1X5 117 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 CBY3A6NI87 242 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 C17orf51A8MQB3 221 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 IQCF6A8MYZ5 107 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 UMAD1C9J7I0 102 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 CTSDP07339 412 aaPredicted RBP2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 CEACAM8P31997 349 aaPredicted RBP2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 GPR183P32249 361 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 CEBPDP49716 269 aaPredicted RBP2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 RAB5CP51148 216 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 RAG2P55895 527 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 ATP5IP56385 69 aaPredicted RBP2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 HSPE1P61604 102 aaKnown RBP2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 SNRPNP63162 240 aaKnown RBP2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 IL24Q13007 206 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 PSG5Q15238 335 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 SURF2Q15527 256 aaPredicted RBP2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 TMEM155Q4W5P6 130 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 TMEM177Q53S58 311 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 ASCL4Q6XD76 172 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 ACP7Q6ZNF0 438 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 SPNS2Q8IVW8 549 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 CRIPAKQ8N1N5 446 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 DRAM1Q8N682 238 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 Q8NFD4 153 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 TNFRSF14Q92956 283 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 SMIM7Q9BQ49 75 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 NEURL2Q9BR09 285 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 PRDM13Q9H4Q3 707 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 ZNF430Q9H8G1 570 aaPredicted RBP2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 PIKFYVEQ9Y2I7 2098 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 CSPG4Q6UVK1 2322 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 MED13LQ71F56 2210 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 DOCK10Q96BY6 2186 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 A0A087WX48 190 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 IGHV1-18A0A0C4DH31 117 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 TMEM272A0A1B0GTI8 110 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 PPP5D1E7EU14 171 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 CDC42EP2O14613 210 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 GGCTO75223 188 aaKnown RBP2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 UPK1BO75841 260 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 PRSS23O95084 383 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 SNAPINO95295 136 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 PTBP3O95758 552 aaKnown RBP2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 CST4P01036 141 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 P01737 135 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 CRYBB2P43320 205 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 RPS10P46783 165 aaKnown RBP2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 NKX2-5P52952 324 aaPredicted RBP2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 APOC4P55056 127 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 DLX1P56177 255 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 B2MP61769 119 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 LSAMPQ13449 338 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 ASAH1Q13510 395 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 RNF212Q495C1 297 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 KHDC3LQ587J8 217 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 C12orf73Q69YU5 71 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 RNASEKQ6P5S7 137 aaKnown RBP2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 C19orf35Q6ZS72 473 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 SLC51BQ86UW2 128 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 HAPLN4Q86UW8 402 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 C17orf82Q86X59 251 aaPredicted RBP2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 BEND2Q8NDZ0 799 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 OR5AU1Q8NGC0 362 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 CTHRC1Q96CG8 243 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 SPOCK3Q9BQ16 436 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 KCNK15Q9H427 330 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 NPVFQ9HCQ7 196 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 A0A0G2JMZ2 1700 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 ARFGEF3Q5TH69 2177 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 KBTBD11-OT1A0A1B0GTJ5 212 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 NPIPB13A6NJU9 1138 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 C9JCJ5 164 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 NPIPB4C9JG80 1138 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 NPIPB8E9PQR5 432 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 M0R1W7 72 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 ZNF207O43670 478 aaKnown RBP2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 TNFSF13O75888 250 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 OR4E1P0C645 316 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 CGB3P0DN86 165 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 CGB7P0DN87 165 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 EVX1P49640 407 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 HMGA2P52926 109 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 ZNF154Q13106 437 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 BTN1A1Q13410 526 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 UNC119Q13432 240 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 ZNF56Q15929 161 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 PEAR1Q5VY43 1037 aaPredicted RBP2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 VMO1Q7Z5L0 202 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 COMMD7Q86VX2 200 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 DTX1Q86Y01 620 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 LAX1Q8IWV1 398 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 DMRTC2Q8IXT2 367 aaPredicted RBP2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 CELF2-AS1Q8N7Q2 184 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 POC1AQ8NBT0 407 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 OR10G4Q8NGN3 311 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 OR10G9Q8NGN4 311 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 OR10G7Q8NGN6 311 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms