RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 ZNF562Q6V9R5 426 aa15.15■□□□□ 0.02
SS18-208ENST00000577751 HARBI1Q96MB7 349 aa15.15■□□□□ 0.02
SS18-208ENST00000577751 ABHD1Q96SE0 405 aa15.15■□□□□ 0.02
SS18-208ENST00000577751 PARP11Q9NR21 331 aa15.15■□□□□ 0.02
SS18-208ENST00000577751 CCL28Q9NRJ3 127 aa15.15■□□□□ 0.02
SS18-208ENST00000577751 FBXO7Q9Y3I1 522 aa15.15■□□□□ 0.02
SS18-208ENST00000577751 G3V318 75 aa15.14■□□□□ 0.01
SS18-208ENST00000577751 SHOXO15266 292 aa15.14■□□□□ 0.01
SS18-208ENST00000577751 ELANEP08246 267 aa15.14■□□□□ 0.01
SS18-208ENST00000577751 RPL23AP62750 156 aaKnown RBP15.14■□□□□ 0.01
SS18-208ENST00000577751 FOXE3Q13461 319 aa15.14■□□□□ 0.01
SS18-208ENST00000577751 C19orf54Q5BKX5 351 aa15.14■□□□□ 0.01
SS18-208ENST00000577751 ZNF66Q6ZN08 573 aa15.14■□□□□ 0.01
SS18-208ENST00000577751 KCTD9Q7L273 389 aa15.14■□□□□ 0.01
SS18-208ENST00000577751 PPP1R27Q86WC6 154 aa15.14■□□□□ 0.01
SS18-208ENST00000577751 LAX1Q8IWV1 398 aa15.14■□□□□ 0.01
SS18-208ENST00000577751 MFSD4AQ8N468 514 aa15.14■□□□□ 0.01
SS18-208ENST00000577751 ZBTB34Q8NCN2 500 aa15.14■□□□□ 0.01
SS18-208ENST00000577751 OR5H2Q8NGV7 314 aa15.14■□□□□ 0.01
SS18-208ENST00000577751 OSR1Q8TAX0 266 aaPredicted RBP15.14■□□□□ 0.01
SS18-208ENST00000577751 SECTM1Q8WVN6 248 aa15.14■□□□□ 0.01
SS18-208ENST00000577751 TPSG1Q9NRR2 321 aa15.14■□□□□ 0.01
SS18-208ENST00000577751 PRELID3BQ9Y3B1 194 aa15.14■□□□□ 0.01
SS18-208ENST00000577751 CMYA5Q8N3K9 4069 aa15.13■□□□□ 0.01
SS18-208ENST00000577751 TRAV41A0A0B4J266 112 aa15.13■□□□□ 0.01
SS18-208ENST00000577751 RGS5O15539 181 aa15.13■□□□□ 0.01
SS18-208ENST00000577751 CRYZL1O95825 349 aa15.13■□□□□ 0.01
SS18-208ENST00000577751 CA2P00918 260 aa15.13■□□□□ 0.01
SS18-208ENST00000577751 PSMB8P28062 276 aa15.13■□□□□ 0.01
SS18-208ENST00000577751 RCVRNP35243 200 aa15.13■□□□□ 0.01
SS18-208ENST00000577751 BRWD1-AS2P59051 145 aa15.13■□□□□ 0.01
SS18-208ENST00000577751 C15orf40Q8WUR7 153 aa15.13■□□□□ 0.01
SS18-208ENST00000577751 CLCC1Q96S66 551 aa15.13■□□□□ 0.01
SS18-208ENST00000577751 SLIRPQ9GZT3 109 aaKnown RBP15.13■□□□□ 0.01
SS18-208ENST00000577751 SLC5A7Q9GZV3 580 aa15.13■□□□□ 0.01
SS18-208ENST00000577751 NUBP2Q9Y5Y2 271 aa15.13■□□□□ 0.01
SS18-208ENST00000577751 WSB1Q9Y6I7 421 aa15.13■□□□□ 0.01
SS18-208ENST00000577751 FCGR3BO75015 233 aa15.12■□□□□ 0.01
SS18-208ENST00000577751 IGLV1-40P01703 118 aa15.12■□□□□ 0.01
SS18-208ENST00000577751 HLA-DMAP28067 261 aa15.12■□□□□ 0.01
SS18-208ENST00000577751 HRH1P35367 487 aa15.12■□□□□ 0.01
SS18-208ENST00000577751 FXYD4P59646 89 aa15.12■□□□□ 0.01
SS18-208ENST00000577751 SSBP2P81877 361 aaPredicted RBP15.12■□□□□ 0.01
SS18-208ENST00000577751 MRGPRG-AS1Q2M3A8 158 aa15.12■□□□□ 0.01
SS18-208ENST00000577751 KHDC1LQ5JSQ8 128 aa15.12■□□□□ 0.01
SS18-208ENST00000577751 TEX45Q8NA69 505 aa15.12■□□□□ 0.01
SS18-208ENST00000577751 MINDY2Q8NBR6 621 aa15.12■□□□□ 0.01
SS18-208ENST00000577751 MOB3AQ96BX8 217 aa15.12■□□□□ 0.01
SS18-208ENST00000577751 GPHA2Q96T91 129 aa15.12■□□□□ 0.01
SS18-208ENST00000577751 ZNF2Q9BSG1 426 aaPredicted RBP15.12■□□□□ 0.01
SS18-208ENST00000577751 NXF2Q9GZY0 626 aaKnown RBP15.12■□□□□ 0.01
SS18-208ENST00000577751 RBM38Q9H0Z9 239 aaKnown RBP15.12■□□□□ 0.01
SS18-208ENST00000577751 TAS2R8Q9NYW2 309 aa15.12■□□□□ 0.01
SS18-208ENST00000577751 ARPC1BO15143 372 aaKnown RBP15.11■□□□□ 0.01
SS18-208ENST00000577751 RPLP1P05386 114 aaKnown RBP15.11■□□□□ 0.01
SS18-208ENST00000577751 SLC6A1P30531 599 aa15.11■□□□□ 0.01
SS18-208ENST00000577751 GNRHRP30968 328 aa15.11■□□□□ 0.01
SS18-208ENST00000577751 UBE2KP61086 200 aa15.11■□□□□ 0.01
SS18-208ENST00000577751 CXorf66Q5JRM2 361 aaPredicted RBP15.11■□□□□ 0.01
SS18-208ENST00000577751 ZNF818PQ6ZRF7 136 aa15.11■□□□□ 0.01
SS18-208ENST00000577751 C18orf65Q6ZTR6 163 aa15.11■□□□□ 0.01
SS18-208ENST00000577751 OR6F1Q8NGZ6 308 aa15.11■□□□□ 0.01
SS18-208ENST00000577751 OR52I2Q8NH67 350 aa15.11■□□□□ 0.01
SS18-208ENST00000577751 KLK11Q9UBX7 282 aa15.11■□□□□ 0.01
SS18-208ENST00000577751 MTFP1Q9UDX5 166 aa15.11■□□□□ 0.01
SS18-208ENST00000577751 PF4V1P10720 104 aa15.1■□□□□ 0.01
SS18-208ENST00000577751 HERV-K104P61576 105 aa15.1■□□□□ 0.01
SS18-208ENST00000577751 PJVKQ0ZLH3 352 aa15.1■□□□□ 0.01
SS18-208ENST00000577751 VMA21Q3ZAQ7 101 aa15.1■□□□□ 0.01
SS18-208ENST00000577751 AKIRIN2Q53H80 203 aa15.1■□□□□ 0.01
SS18-208ENST00000577751 OR2B11Q5JQS5 317 aa15.1■□□□□ 0.01
SS18-208ENST00000577751 LCNL1Q6ZST4 164 aa15.1■□□□□ 0.01
SS18-208ENST00000577751 TCTEX1D1Q8N7M0 179 aa15.1■□□□□ 0.01
SS18-208ENST00000577751 MYOZ3Q8TDC0 251 aa15.1■□□□□ 0.01
SS18-208ENST00000577751 TCTEX1D2Q8WW35 142 aa15.1■□□□□ 0.01
SS18-208ENST00000577751 BORCS5Q969J3 196 aa15.1■□□□□ 0.01
SS18-208ENST00000577751 TNFSF12O43508 249 aa15.09■□□□□ 0.01
SS18-208ENST00000577751 CDX1P47902 265 aaPredicted RBP15.09■□□□□ 0.01
SS18-208ENST00000577751 TMEM267Q0VDI3 215 aaPredicted RBP15.09■□□□□ 0.01
SS18-208ENST00000577751 FXYD3Q14802 87 aa15.09■□□□□ 0.01
SS18-208ENST00000577751 VAX1Q5SQQ9 334 aa15.09■□□□□ 0.01
SS18-208ENST00000577751 TMEM17Q86X19 198 aa15.09■□□□□ 0.01
SS18-208ENST00000577751 WFDC9Q8NEX5 89 aa15.09■□□□□ 0.01
SS18-208ENST00000577751 OR4S2Q8NH73 311 aa15.09■□□□□ 0.01
SS18-208ENST00000577751 ARPC1AQ92747 370 aa15.09■□□□□ 0.01
SS18-208ENST00000577751 FAM103A1Q9BTL3 118 aaKnown RBP15.09■□□□□ 0.01
SS18-208ENST00000577751 KLK15Q9H2R5 256 aa15.09■□□□□ 0.01
SS18-208ENST00000577751 GABARAPH6UMI1 98 aa15.08■□□□□ 0
SS18-208ENST00000577751 ZNF701M0R085 212 aaPredicted RBP15.08■□□□□ 0
SS18-208ENST00000577751 SOX15O60248 233 aa15.08■□□□□ 0
SS18-208ENST00000577751 KIR2DS2P43631 304 aa15.08■□□□□ 0
SS18-208ENST00000577751 MRPS10P82664 201 aaKnown RBP15.08■□□□□ 0
SS18-208ENST00000577751 KIAA0141Q14154 515 aaPredicted RBP15.08■□□□□ 0
SS18-208ENST00000577751 ECSCRQ19T08 205 aa15.08■□□□□ 0
SS18-208ENST00000577751 ACTBL2Q562R1 376 aa15.08■□□□□ 0
SS18-208ENST00000577751 RNASE12Q5GAN4 147 aaKnown RBP15.08■□□□□ 0
SS18-208ENST00000577751 PYHIN1Q6K0P9 492 aa15.08■□□□□ 0
SS18-208ENST00000577751 ETV3LQ6ZN32 361 aa15.08■□□□□ 0
SS18-208ENST00000577751 ZNF695Q8IW36 515 aa15.08■□□□□ 0
SS18-208ENST00000577751 LFNGQ8NES3 379 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms