RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 RPA2P15927 270 aa8.93□□□□□ -0.98
CDK5RAP3-204ENST00000577664 UCP1P25874 307 aa8.93□□□□□ -0.98
CDK5RAP3-204ENST00000577664 BRS3P32247 399 aa8.93□□□□□ -0.98
CDK5RAP3-204ENST00000577664 ARHGDIBP52566 201 aa8.93□□□□□ -0.98
CDK5RAP3-204ENST00000577664 CATR1Q13166 79 aa8.93□□□□□ -0.98
CDK5RAP3-204ENST00000577664 ABCA11PQ4W5N1 156 aa8.93□□□□□ -0.98
CDK5RAP3-204ENST00000577664 ZNF585BQ52M93 769 aa8.93□□□□□ -0.98
CDK5RAP3-204ENST00000577664 TMEM177Q53S58 311 aa8.93□□□□□ -0.98
CDK5RAP3-204ENST00000577664 SHISA2Q6UWI4 295 aa8.93□□□□□ -0.98
CDK5RAP3-204ENST00000577664 CCBE1Q6UXH8 406 aaPredicted RBP8.93□□□□□ -0.98
CDK5RAP3-204ENST00000577664 TBC1D26Q86UD7 250 aa8.93□□□□□ -0.98
CDK5RAP3-204ENST00000577664 PDPNQ86YL7 162 aa8.93□□□□□ -0.98
CDK5RAP3-204ENST00000577664 BCL6BQ8N143 479 aaPredicted RBP8.93□□□□□ -0.98
CDK5RAP3-204ENST00000577664 LRTM2Q8N967 370 aa8.93□□□□□ -0.98
CDK5RAP3-204ENST00000577664 GLYATL2Q8WU03 294 aa8.93□□□□□ -0.98
CDK5RAP3-204ENST00000577664 ZNF747Q9BV97 191 aa8.93□□□□□ -0.98
CDK5RAP3-204ENST00000577664 MRPL20Q9BYC9 149 aaKnown RBP8.93□□□□□ -0.98
CDK5RAP3-204ENST00000577664 NAA60Q9H7X0 242 aa8.93□□□□□ -0.98
CDK5RAP3-204ENST00000577664 NUDT15Q9NV35 164 aa8.93□□□□□ -0.98
CDK5RAP3-204ENST00000577664 FLVCR2Q9UPI3 526 aa8.93□□□□□ -0.98
CDK5RAP3-204ENST00000577664 KCNIP3Q9Y2W7 256 aa8.93□□□□□ -0.98
CDK5RAP3-204ENST00000577664 PRELID3BQ9Y3B1 194 aa8.93□□□□□ -0.98
CDK5RAP3-204ENST00000577664 HILPDAQ9Y5L2 63 aa8.93□□□□□ -0.98
CDK5RAP3-204ENST00000577664 IGHV3OR16-10A0A075B7F0 116 aa8.92□□□□□ -0.98
CDK5RAP3-204ENST00000577664 A0A0B4J2A0 478 aa8.92□□□□□ -0.98
CDK5RAP3-204ENST00000577664 PIGBOS1A0A0B4J2F0 54 aa8.92□□□□□ -0.98
CDK5RAP3-204ENST00000577664 C3orf85A0A1B0GTC6 90 aa8.92□□□□□ -0.98
CDK5RAP3-204ENST00000577664 A0A1W2PRD5 423 aa8.92□□□□□ -0.98
CDK5RAP3-204ENST00000577664 A0A1W2PRF3 423 aa8.92□□□□□ -0.98
CDK5RAP3-204ENST00000577664 A0A1W2PRM7 423 aa8.92□□□□□ -0.98
CDK5RAP3-204ENST00000577664 TIMM23O14925 209 aa8.92□□□□□ -0.98
CDK5RAP3-204ENST00000577664 ARPC1BO15143 372 aaKnown RBP8.92□□□□□ -0.98
CDK5RAP3-204ENST00000577664 PRAF2O60831 178 aa8.92□□□□□ -0.98
CDK5RAP3-204ENST00000577664 CDS2O95674 445 aa8.92□□□□□ -0.98
CDK5RAP3-204ENST00000577664 IL6RP08887 468 aaPredicted RBP8.92□□□□□ -0.98
CDK5RAP3-204ENST00000577664 OR4E1P0C645 316 aa8.92□□□□□ -0.98
CDK5RAP3-204ENST00000577664 PI3P19957 117 aa8.92□□□□□ -0.98
CDK5RAP3-204ENST00000577664 IER3P46695 156 aa8.92□□□□□ -0.98
CDK5RAP3-204ENST00000577664 RAB13P51153 203 aa8.92□□□□□ -0.98
CDK5RAP3-204ENST00000577664 LINC00205P59089 165 aa8.92□□□□□ -0.98
CDK5RAP3-204ENST00000577664 POU2AF1Q16633 256 aa8.92□□□□□ -0.98
CDK5RAP3-204ENST00000577664 DEFB112Q30KQ8 113 aa8.92□□□□□ -0.98
CDK5RAP3-204ENST00000577664 PHLDA2Q53GA4 152 aa8.92□□□□□ -0.98
CDK5RAP3-204ENST00000577664 C11orf88Q6PI97 169 aa8.92□□□□□ -0.98
CDK5RAP3-204ENST00000577664 SGPP2Q8IWX5 399 aa8.92□□□□□ -0.98
CDK5RAP3-204ENST00000577664 TMEM86BQ8N661 226 aa8.92□□□□□ -0.98
CDK5RAP3-204ENST00000577664 Q8N6K4 173 aa8.92□□□□□ -0.98
CDK5RAP3-204ENST00000577664 OR4C13Q8NGP0 309 aa8.92□□□□□ -0.98
CDK5RAP3-204ENST00000577664 OSR1Q8TAX0 266 aaPredicted RBP8.92□□□□□ -0.98
CDK5RAP3-204ENST00000577664 IL22RA2Q969J5 263 aa8.92□□□□□ -0.98
CDK5RAP3-204ENST00000577664 TMEM56Q96MV1 263 aa8.92□□□□□ -0.98
CDK5RAP3-204ENST00000577664 TMEM222Q9H0R3 208 aa8.92□□□□□ -0.98
CDK5RAP3-204ENST00000577664 PLEKHA2Q9HB19 425 aa8.92□□□□□ -0.98
CDK5RAP3-204ENST00000577664 LIN7CQ9NUP9 197 aaKnown RBP8.92□□□□□ -0.98
CDK5RAP3-204ENST00000577664 SHPKQ9UHJ6 478 aa8.92□□□□□ -0.98
CDK5RAP3-204ENST00000577664 WASHC3Q9Y3C0 194 aa8.92□□□□□ -0.98
CDK5RAP3-204ENST00000577664 FAM96BQ9Y3D0 163 aa8.92□□□□□ -0.98
CDK5RAP3-204ENST00000577664 TMEM56-RWDD3S4R434 201 aa8.92□□□□□ -0.98
CDK5RAP3-204ENST00000577664 EPPK1P58107 5090 aaKnown RBP8.91□□□□□ -0.98
CDK5RAP3-204ENST00000577664 C9orf170A2RU37 121 aa8.91□□□□□ -0.98
CDK5RAP3-204ENST00000577664 SNRPGP15A8MWD9 76 aa8.91□□□□□ -0.98
CDK5RAP3-204ENST00000577664 INMT-MINDY4F8WBC2 141 aa8.91□□□□□ -0.98
CDK5RAP3-204ENST00000577664 SFT2D2O95562 160 aa8.91□□□□□ -0.98
CDK5RAP3-204ENST00000577664 DUS4LO95620 317 aaKnown RBP8.91□□□□□ -0.98
CDK5RAP3-204ENST00000577664 HPRT1P00492 218 aa8.91□□□□□ -0.98
CDK5RAP3-204ENST00000577664 RLN1P04808 185 aa8.91□□□□□ -0.98
CDK5RAP3-204ENST00000577664 FGF2P09038 288 aa8.91□□□□□ -0.98
CDK5RAP3-204ENST00000577664 FAM106CPP0CH98 169 aa8.91□□□□□ -0.98
CDK5RAP3-204ENST00000577664 VSIG10L2P0DP72 767 aa8.91□□□□□ -0.98
CDK5RAP3-204ENST00000577664 SPNP16150 400 aa8.91□□□□□ -0.98
CDK5RAP3-204ENST00000577664 AKR1C4P17516 323 aa8.91□□□□□ -0.98
CDK5RAP3-204ENST00000577664 LGALS7P47929 136 aa8.91□□□□□ -0.98
CDK5RAP3-204ENST00000577664 REG1BP48304 166 aa8.91□□□□□ -0.98
CDK5RAP3-204ENST00000577664 TMEM187Q14656 261 aa8.91□□□□□ -0.98
CDK5RAP3-204ENST00000577664 GLDNQ6ZMI3 551 aaPredicted RBP8.91□□□□□ -0.98
CDK5RAP3-204ENST00000577664 MOB3BQ86TA1 216 aa8.91□□□□□ -0.98
CDK5RAP3-204ENST00000577664 DRAXINQ8NBI3 349 aaPredicted RBP8.91□□□□□ -0.98
CDK5RAP3-204ENST00000577664 NPBQ8NG41 125 aa8.91□□□□□ -0.98
CDK5RAP3-204ENST00000577664 OR8H1Q8NGG4 311 aa8.91□□□□□ -0.98
CDK5RAP3-204ENST00000577664 ZNF48Q96MX3 618 aaPredicted RBP8.91□□□□□ -0.98
CDK5RAP3-204ENST00000577664 TP53RKQ96S44 253 aa8.91□□□□□ -0.98
CDK5RAP3-204ENST00000577664 SSX3Q99909 188 aa8.91□□□□□ -0.98
CDK5RAP3-204ENST00000577664 AIFM2Q9BRQ8 373 aa8.91□□□□□ -0.98
CDK5RAP3-204ENST00000577664 SOX21Q9Y651 276 aaPredicted RBP8.91□□□□□ -0.98
CDK5RAP3-204ENST00000577664 POMT1Q9Y6A1 747 aa8.91□□□□□ -0.98
CDK5RAP3-204ENST00000577664 TRAV6A0A075B6T7 132 aa8.9□□□□□ -0.98
CDK5RAP3-204ENST00000577664 CLDN34H7C241 214 aa8.9□□□□□ -0.98
CDK5RAP3-204ENST00000577664 TNFSF12O43508 249 aa8.9□□□□□ -0.98
CDK5RAP3-204ENST00000577664 DHFRP00374 187 aa8.9□□□□□ -0.98
CDK5RAP3-204ENST00000577664 MOSP00540 346 aa8.9□□□□□ -0.98
CDK5RAP3-204ENST00000577664 APOA2P02652 100 aa8.9□□□□□ -0.98
CDK5RAP3-204ENST00000577664 IGKV1-16P04430 117 aa8.9□□□□□ -0.98
CDK5RAP3-204ENST00000577664 ANXA3P12429 323 aa8.9□□□□□ -0.98
CDK5RAP3-204ENST00000577664 ANXA7P20073 488 aaKnown RBP8.9□□□□□ -0.98
CDK5RAP3-204ENST00000577664 SRP14P37108 136 aaKnown RBP8.9□□□□□ -0.98
CDK5RAP3-204ENST00000577664 DHRS2Q13268 280 aa8.9□□□□□ -0.98
CDK5RAP3-204ENST00000577664 PPP1R1AQ13522 171 aa8.9□□□□□ -0.98
CDK5RAP3-204ENST00000577664 RTL8BQ17RB0 113 aa8.9□□□□□ -0.98
CDK5RAP3-204ENST00000577664 LRRC75BQ2VPJ9 315 aa8.9□□□□□ -0.98
CDK5RAP3-204ENST00000577664 AWAT1Q58HT5 328 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms