RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 TRBV5-7A0A0A0MS05 114 aa7.55□□□□□ -1.2
NPLOC4-220ENST00000576940 OR2C1O95371 312 aa7.55□□□□□ -1.2
NPLOC4-220ENST00000576940 NAPSAO96009 420 aa7.55□□□□□ -1.2
NPLOC4-220ENST00000576940 SCTP09683 121 aa7.55□□□□□ -1.2
NPLOC4-220ENST00000576940 ZBTB25P24278 435 aa7.55□□□□□ -1.2
NPLOC4-220ENST00000576940 HTR2CP28335 458 aa7.55□□□□□ -1.2
NPLOC4-220ENST00000576940 RHOGP84095 191 aa7.55□□□□□ -1.2
NPLOC4-220ENST00000576940 ZNF45Q02386 682 aa7.55□□□□□ -1.2
NPLOC4-220ENST00000576940 ATP5G2Q06055 141 aa7.55□□□□□ -1.2
NPLOC4-220ENST00000576940 TNFRSF9Q07011 255 aa7.55□□□□□ -1.2
NPLOC4-220ENST00000576940 EXOSC2Q13868 293 aaKnown RBP7.55□□□□□ -1.2
NPLOC4-220ENST00000576940 YIF1BQ5BJH7 314 aa7.55□□□□□ -1.2
NPLOC4-220ENST00000576940 LGALS9CQ6DKI2 356 aa7.55□□□□□ -1.2
NPLOC4-220ENST00000576940 TMPRSS11AQ6ZMR5 421 aa7.55□□□□□ -1.2
NPLOC4-220ENST00000576940 SLC16A13Q7RTY0 426 aa7.55□□□□□ -1.2
NPLOC4-220ENST00000576940 PRSS48Q7RTY5 328 aa7.55□□□□□ -1.2
NPLOC4-220ENST00000576940 CDH26Q8IXH8 852 aa7.55□□□□□ -1.2
NPLOC4-220ENST00000576940 KCNG3Q8TAE7 436 aa7.55□□□□□ -1.2
NPLOC4-220ENST00000576940 PGLYRP3Q96LB9 341 aa7.55□□□□□ -1.2
NPLOC4-220ENST00000576940 BCL7BQ9BQE9 202 aa7.55□□□□□ -1.2
NPLOC4-220ENST00000576940 NICN1Q9BSH3 213 aa7.55□□□□□ -1.2
NPLOC4-220ENST00000576940 HDHD3Q9BSH5 251 aaPredicted RBP7.55□□□□□ -1.2
NPLOC4-220ENST00000576940 ZC4H2Q9NQZ6 224 aa7.55□□□□□ -1.2
NPLOC4-220ENST00000576940 ZNF221Q9UK13 617 aa7.55□□□□□ -1.2
NPLOC4-220ENST00000576940 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.54□□□□□ -1.2
NPLOC4-220ENST00000576940 PNMA8CA0A1B0GUJ8 204 aa7.54□□□□□ -1.2
NPLOC4-220ENST00000576940 DPPA5A6NC42 116 aa7.54□□□□□ -1.2
NPLOC4-220ENST00000576940 M0R1X1 148 aa7.54□□□□□ -1.2
NPLOC4-220ENST00000576940 SPRY2O43597 315 aa7.54□□□□□ -1.2
NPLOC4-220ENST00000576940 SCAF4O95104 1147 aaKnown RBP7.54□□□□□ -1.2
NPLOC4-220ENST00000576940 APOA2P02652 100 aa7.54□□□□□ -1.2
NPLOC4-220ENST00000576940 OR9G9P0C7N8 305 aa7.54□□□□□ -1.2
NPLOC4-220ENST00000576940 CBLN1P23435 193 aa7.54□□□□□ -1.2
NPLOC4-220ENST00000576940 PRR20EP86478 221 aa7.54□□□□□ -1.2
NPLOC4-220ENST00000576940 PRR20CP86479 221 aa7.54□□□□□ -1.2
NPLOC4-220ENST00000576940 PRR20DP86480 221 aa7.54□□□□□ -1.2
NPLOC4-220ENST00000576940 PRR20BP86481 221 aa7.54□□□□□ -1.2
NPLOC4-220ENST00000576940 PRR20AP86496 221 aa7.54□□□□□ -1.2
NPLOC4-220ENST00000576940 TM4SF20Q53R12 229 aa7.54□□□□□ -1.2
NPLOC4-220ENST00000576940 WFDC3Q8IUB2 231 aa7.54□□□□□ -1.2
NPLOC4-220ENST00000576940 TMEM61Q8N0U2 210 aa7.54□□□□□ -1.2
NPLOC4-220ENST00000576940 OR52B4Q8NGK2 314 aa7.54□□□□□ -1.2
NPLOC4-220ENST00000576940 EDARADDQ8WWZ3 215 aa7.54□□□□□ -1.2
NPLOC4-220ENST00000576940 FCGR1BQ92637 280 aa7.54□□□□□ -1.2
NPLOC4-220ENST00000576940 PTX4Q96A99 478 aa7.54□□□□□ -1.2
NPLOC4-220ENST00000576940 KCNK15Q9H427 330 aa7.54□□□□□ -1.2
NPLOC4-220ENST00000576940 VCX3AQ9NNX9 186 aa7.54□□□□□ -1.2
NPLOC4-220ENST00000576940 SCN3BQ9NY72 215 aa7.54□□□□□ -1.2
NPLOC4-220ENST00000576940 TECRQ9NZ01 308 aaKnown RBP7.54□□□□□ -1.2
NPLOC4-220ENST00000576940 PSORS1C1Q9UIG5 152 aa7.54□□□□□ -1.2
NPLOC4-220ENST00000576940 DNAH11Q96DT5 4516 aa7.53□□□□□ -1.2
NPLOC4-220ENST00000576940 TRBV9A0A0B4J1U6 114 aa7.53□□□□□ -1.2
NPLOC4-220ENST00000576940 IGKV1-6A0A0C4DH72 117 aa7.53□□□□□ -1.2
NPLOC4-220ENST00000576940 IRGMA1A4Y4 181 aa7.53□□□□□ -1.2
NPLOC4-220ENST00000576940 SHOXO15266 292 aa7.53□□□□□ -1.2
NPLOC4-220ENST00000576940 MPPED1O15442 326 aa7.53□□□□□ -1.2
NPLOC4-220ENST00000576940 OR2J3O76001 311 aa7.53□□□□□ -1.2
NPLOC4-220ENST00000576940 NDUFB8O95169 186 aa7.53□□□□□ -1.2
NPLOC4-220ENST00000576940 IGHV3-23P01764 117 aa7.53□□□□□ -1.2
NPLOC4-220ENST00000576940 DCKP27707 260 aa7.53□□□□□ -1.2
NPLOC4-220ENST00000576940 BMI1P35226 326 aa7.53□□□□□ -1.2
NPLOC4-220ENST00000576940 RPS27AP62979 156 aaKnown RBP7.53□□□□□ -1.2
NPLOC4-220ENST00000576940 TBCEQ15813 527 aaPredicted RBP7.53□□□□□ -1.2
NPLOC4-220ENST00000576940 TNXAQ16473 311 aa7.53□□□□□ -1.2
NPLOC4-220ENST00000576940 ZNF57Q68EA5 555 aaPredicted RBP7.53□□□□□ -1.2
NPLOC4-220ENST00000576940 PHLDA1Q8WV24 401 aaPredicted RBP7.53□□□□□ -1.2
NPLOC4-220ENST00000576940 THRSPQ92748 146 aa7.53□□□□□ -1.2
NPLOC4-220ENST00000576940 HARBI1Q96MB7 349 aa7.53□□□□□ -1.2
NPLOC4-220ENST00000576940 DERL3Q96Q80 235 aa7.53□□□□□ -1.2
NPLOC4-220ENST00000576940 PLEKHJ1Q9NW61 149 aa7.53□□□□□ -1.2
NPLOC4-220ENST00000576940 GHRLQ9UBU3 117 aa7.53□□□□□ -1.2
NPLOC4-220ENST00000576940 MLXQ9UH92 298 aa7.53□□□□□ -1.2
NPLOC4-220ENST00000576940 AK3Q9UIJ7 227 aa7.53□□□□□ -1.2
NPLOC4-220ENST00000576940 A0A0A6YYD4 124 aa7.52□□□□□ -1.21
NPLOC4-220ENST00000576940 ZNF320A2RRD8 509 aa7.52□□□□□ -1.21
NPLOC4-220ENST00000576940 EFCAB10A6NFE3 127 aa7.52□□□□□ -1.21
NPLOC4-220ENST00000576940 FAM223BA6NKX1 122 aa7.52□□□□□ -1.21
NPLOC4-220ENST00000576940 TUSC2O75896 110 aa7.52□□□□□ -1.21
NPLOC4-220ENST00000576940 CD3GP09693 182 aa7.52□□□□□ -1.21
NPLOC4-220ENST00000576940 HLA-DRB3P79483 266 aa7.52□□□□□ -1.21
NPLOC4-220ENST00000576940 UNC119Q13432 240 aa7.52□□□□□ -1.21
NPLOC4-220ENST00000576940 IRF3Q14653 427 aa7.52□□□□□ -1.21
NPLOC4-220ENST00000576940 PRSS8Q16651 343 aa7.52□□□□□ -1.21
NPLOC4-220ENST00000576940 DEFB135Q30KP9 77 aa7.52□□□□□ -1.21
NPLOC4-220ENST00000576940 TMEM177Q53S58 311 aa7.52□□□□□ -1.21
NPLOC4-220ENST00000576940 IDO2Q6ZQW0 420 aa7.52□□□□□ -1.21
NPLOC4-220ENST00000576940 FAM223AQ8IWN6 122 aa7.52□□□□□ -1.21
NPLOC4-220ENST00000576940 SPARTQ8N0X7 666 aa7.52□□□□□ -1.21
NPLOC4-220ENST00000576940 UXS1Q8NBZ7 420 aa7.52□□□□□ -1.21
NPLOC4-220ENST00000576940 OR13F1Q8NGS4 319 aa7.52□□□□□ -1.21
NPLOC4-220ENST00000576940 SRSF12Q8WXF0 261 aaKnown RBP7.52□□□□□ -1.21
NPLOC4-220ENST00000576940 ACOT12Q8WYK0 555 aa7.52□□□□□ -1.21
NPLOC4-220ENST00000576940 DGCR14Q96DF8 476 aaKnown RBP7.52□□□□□ -1.21
NPLOC4-220ENST00000576940 UQCC2Q9BRT2 126 aa7.52□□□□□ -1.21
NPLOC4-220ENST00000576940 SDHAF2Q9NX18 166 aa7.52□□□□□ -1.21
NPLOC4-220ENST00000576940 RDH8Q9NYR8 311 aa7.52□□□□□ -1.21
NPLOC4-220ENST00000576940 EXOSC1Q9Y3B2 195 aaKnown RBP7.52□□□□□ -1.21
NPLOC4-220ENST00000576940 S4R3C0 116 aa7.52□□□□□ -1.21
NPLOC4-220ENST00000576940 PKHD1P08F94 4074 aa7.52□□□□□ -1.21
NPLOC4-220ENST00000576940 TRBV6-6A0A0A6YYG2 114 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms