RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 DEFA6Q01524 100 aa18.39■□□□□ 0.53
SNF8-217ENST00000576353 KCTD9Q7L273 389 aa18.39■□□□□ 0.53
SNF8-217ENST00000576353 TCTEX1D1Q8N7M0 179 aa18.39■□□□□ 0.53
SNF8-217ENST00000576353 MINDY2Q8NBR6 621 aa18.39■□□□□ 0.53
SNF8-217ENST00000576353 OSR1Q8TAX0 266 aaPredicted RBP18.39■□□□□ 0.53
SNF8-217ENST00000576353 BCL7BQ9BQE9 202 aa18.39■□□□□ 0.53
SNF8-217ENST00000576353 SCPEP1Q9HB40 452 aa18.39■□□□□ 0.53
SNF8-217ENST00000576353 NUBP2Q9Y5Y2 271 aa18.39■□□□□ 0.53
SNF8-217ENST00000576353 ECSCRQ19T08 205 aa18.38■□□□□ 0.53
SNF8-217ENST00000576353 VMA21Q3ZAQ7 101 aa18.38■□□□□ 0.53
SNF8-217ENST00000576353 ZNF66Q6ZN08 573 aa18.38■□□□□ 0.53
SNF8-217ENST00000576353 LCNL1Q6ZST4 164 aa18.38■□□□□ 0.53
SNF8-217ENST00000576353 C8orf86Q6ZUL3 223 aa18.38■□□□□ 0.53
SNF8-217ENST00000576353 OVCH2Q7RTZ1 564 aa18.38■□□□□ 0.53
SNF8-217ENST00000576353 ZBTB34Q8NCN2 500 aa18.38■□□□□ 0.53
SNF8-217ENST00000576353 GPX8Q8TED1 209 aa18.38■□□□□ 0.53
SNF8-217ENST00000576353 SECTM1Q8WVN6 248 aa18.38■□□□□ 0.53
SNF8-217ENST00000576353 EHFQ9NZC4 300 aa18.38■□□□□ 0.53
SNF8-217ENST00000576353 FBXO7Q9Y3I1 522 aa18.38■□□□□ 0.53
SNF8-217ENST00000576353 SRRM4A7MD48 611 aaKnown RBP18.37■□□□□ 0.53
SNF8-217ENST00000576353 FCGR3BO75015 233 aa18.37■□□□□ 0.53
SNF8-217ENST00000576353 IGLV1-40P01703 118 aa18.37■□□□□ 0.53
SNF8-217ENST00000576353 CRYGBP07316 175 aa18.37■□□□□ 0.53
SNF8-217ENST00000576353 EGR2P11161 476 aaPredicted RBP18.37■□□□□ 0.53
SNF8-217ENST00000576353 MYCNOSP40205 109 aa18.37■□□□□ 0.53
SNF8-217ENST00000576353 FXYD3Q14802 87 aa18.37■□□□□ 0.53
SNF8-217ENST00000576353 SPCS2Q15005 226 aa18.37■□□□□ 0.53
SNF8-217ENST00000576353 AKIRIN2Q53H80 203 aa18.37■□□□□ 0.53
SNF8-217ENST00000576353 DHRS11Q6UWP2 260 aa18.37■□□□□ 0.53
SNF8-217ENST00000576353 C18orf65Q6ZTR6 163 aa18.37■□□□□ 0.53
SNF8-217ENST00000576353 C1QL4Q86Z23 238 aa18.37■□□□□ 0.53
SNF8-217ENST00000576353 SNX29P2Q8IUI4 249 aa18.37■□□□□ 0.53
SNF8-217ENST00000576353 TEX45Q8NA69 505 aa18.37■□□□□ 0.53
SNF8-217ENST00000576353 OR5H2Q8NGV7 314 aa18.37■□□□□ 0.53
SNF8-217ENST00000576353 DCUN1D5Q9BTE7 237 aa18.37■□□□□ 0.53
SNF8-217ENST00000576353 CCL28Q9NRJ3 127 aa18.37■□□□□ 0.53
SNF8-217ENST00000576353 TPSG1Q9NRR2 321 aa18.37■□□□□ 0.53
SNF8-217ENST00000576353 FOXA2Q9Y261 457 aaPredicted RBP18.37■□□□□ 0.53
SNF8-217ENST00000576353 A3GALT2U3KPV4 340 aa18.37■□□□□ 0.53
SNF8-217ENST00000576353 MEGF8Q7Z7M0 2845 aa18.37■□□□□ 0.53
SNF8-217ENST00000576353 G3V4G9 280 aa18.36■□□□□ 0.53
SNF8-217ENST00000576353 SULT1C2O00338 296 aa18.36■□□□□ 0.53
SNF8-217ENST00000576353 CNIH1O95406 144 aa18.36■□□□□ 0.53
SNF8-217ENST00000576353 UBE2KP61086 200 aa18.36■□□□□ 0.53
SNF8-217ENST00000576353 RPL30P62888 115 aaKnown RBP18.36■□□□□ 0.53
SNF8-217ENST00000576353 DYRK1AQ13627 763 aa18.36■□□□□ 0.53
SNF8-217ENST00000576353 C19orf54Q5BKX5 351 aa18.36■□□□□ 0.53
SNF8-217ENST00000576353 SAMD5Q5TGI4 173 aa18.36■□□□□ 0.53
SNF8-217ENST00000576353 MFSD4AQ8N468 514 aa18.36■□□□□ 0.53
SNF8-217ENST00000576353 TCTEX1D2Q8WW35 142 aa18.36■□□□□ 0.53
SNF8-217ENST00000576353 ARPC1AQ92747 370 aa18.36■□□□□ 0.53
SNF8-217ENST00000576353 BORCS5Q969J3 196 aa18.36■□□□□ 0.53
SNF8-217ENST00000576353 SLC5A7Q9GZV3 580 aa18.36■□□□□ 0.53
SNF8-217ENST00000576353 TAS2R8Q9NYW2 309 aa18.36■□□□□ 0.53
SNF8-217ENST00000576353 ADAM30Q9UKF2 790 aa18.36■□□□□ 0.53
SNF8-217ENST00000576353 NOTCH1P46531 2555 aa18.36■□□□□ 0.53
SNF8-217ENST00000576353 NOL3O60936 208 aaKnown RBP18.35■□□□□ 0.53
SNF8-217ENST00000576353 TPPPO94811 219 aa18.35■□□□□ 0.53
SNF8-217ENST00000576353 PMP2P02689 132 aa18.35■□□□□ 0.53
SNF8-217ENST00000576353 RFX2P48378 723 aa18.35■□□□□ 0.53
SNF8-217ENST00000576353 FXYD4P59646 89 aa18.35■□□□□ 0.53
SNF8-217ENST00000576353 HERV-K104P61576 105 aa18.35■□□□□ 0.53
SNF8-217ENST00000576353 EIF4EBP1Q13541 118 aaPredicted RBP18.35■□□□□ 0.53
SNF8-217ENST00000576353 UNQ5815/PRO19632Q6UWF5 114 aa18.35■□□□□ 0.53
SNF8-217ENST00000576353 OR4S2Q8NH73 311 aa18.35■□□□□ 0.53
SNF8-217ENST00000576353 MYOZ3Q8TDC0 251 aa18.35■□□□□ 0.53
SNF8-217ENST00000576353 FAM103A1Q9BTL3 118 aaKnown RBP18.35■□□□□ 0.53
SNF8-217ENST00000576353 KLK15Q9H2R5 256 aa18.35■□□□□ 0.53
SNF8-217ENST00000576353 A0A1W2PN81 502 aa18.34■□□□□ 0.53
SNF8-217ENST00000576353 CD40LGP29965 261 aa18.34■□□□□ 0.53
SNF8-217ENST00000576353 CHRNA7P36544 502 aa18.34■□□□□ 0.53
SNF8-217ENST00000576353 RAB9AP51151 201 aa18.34■□□□□ 0.53
SNF8-217ENST00000576353 GNB1P62873 340 aa18.34■□□□□ 0.53
SNF8-217ENST00000576353 ACTBL2Q562R1 376 aa18.34■□□□□ 0.53
SNF8-217ENST00000576353 PYHIN1Q6K0P9 492 aa18.34■□□□□ 0.53
SNF8-217ENST00000576353 ETV3LQ6ZN32 361 aa18.34■□□□□ 0.53
SNF8-217ENST00000576353 LYSMD2Q8IV50 215 aa18.34■□□□□ 0.53
SNF8-217ENST00000576353 MRPL41Q8IXM3 137 aaKnown RBP18.34■□□□□ 0.53
SNF8-217ENST00000576353 LINC00482Q8N8I6 264 aa18.34■□□□□ 0.53
SNF8-217ENST00000576353 LFNGQ8NES3 379 aa18.34■□□□□ 0.53
SNF8-217ENST00000576353 OR5M8Q8NGP6 311 aa18.34■□□□□ 0.53
SNF8-217ENST00000576353 GRPEL2Q8TAA5 225 aa18.34■□□□□ 0.53
SNF8-217ENST00000576353 C15orf40Q8WUR7 153 aa18.34■□□□□ 0.53
SNF8-217ENST00000576353 C4orf3Q8WVX3 66 aa18.34■□□□□ 0.53
SNF8-217ENST00000576353 UBE2E2Q96LR5 201 aa18.34■□□□□ 0.53
SNF8-217ENST00000576353 EXTL2Q9UBQ6 330 aa18.34■□□□□ 0.53
SNF8-217ENST00000576353 SCOCQ9UIL1 159 aa18.34■□□□□ 0.53
SNF8-217ENST00000576353 CCL24O00175 119 aa18.33■□□□□ 0.52
SNF8-217ENST00000576353 ARPC1BO15143 372 aaKnown RBP18.33■□□□□ 0.52
SNF8-217ENST00000576353 HLA-DMAP28067 261 aa18.33■□□□□ 0.52
SNF8-217ENST00000576353 RCVRNP35243 200 aa18.33■□□□□ 0.52
SNF8-217ENST00000576353 KIR2DS2P43631 304 aa18.33■□□□□ 0.52
SNF8-217ENST00000576353 PJVKQ0ZLH3 352 aa18.33■□□□□ 0.52
SNF8-217ENST00000576353 OXLD1Q5BKU9 147 aa18.33■□□□□ 0.52
SNF8-217ENST00000576353 OR2B11Q5JQS5 317 aa18.33■□□□□ 0.52
SNF8-217ENST00000576353 OR6F1Q8NGZ6 308 aa18.33■□□□□ 0.52
SNF8-217ENST00000576353 RCC1LQ96I51 464 aaKnown RBP18.33■□□□□ 0.52
SNF8-217ENST00000576353 ZNF2Q9BSG1 426 aaPredicted RBP18.33■□□□□ 0.52
SNF8-217ENST00000576353 RGS5O15539 181 aa18.32■□□□□ 0.52
SNF8-217ENST00000576353 CREBL2O60519 120 aaPredicted RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms