RNA–Protein interactions for RNA: ENST00000574933.1

CCDC40-213, Transcript of coiled-coil domain containing 40, humanhuman

TSL 3

Gene CCDC40, Length 326 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-213ENST00000574933 MOB4Q9Y3A3 225 aa14.5□□□□□ -0.09
CCDC40-213ENST00000574933 H7C2Y5 167 aa14.49□□□□□ -0.09
CCDC40-213ENST00000574933 TNFSF12O43508 249 aa14.49□□□□□ -0.09
CCDC40-213ENST00000574933 NDUFA3O95167 84 aa14.49□□□□□ -0.09
CCDC40-213ENST00000574933 F2RP25116 425 aa14.49□□□□□ -0.09
CCDC40-213ENST00000574933 LGALS7P47929 136 aa14.49□□□□□ -0.09
CCDC40-213ENST00000574933 CBX3Q13185 183 aa14.49□□□□□ -0.09
CCDC40-213ENST00000574933 ASAH1Q13510 395 aa14.49□□□□□ -0.09
CCDC40-213ENST00000574933 HNF4GQ14541 408 aa14.49□□□□□ -0.09
CCDC40-213ENST00000574933 PHLDA2Q53GA4 152 aa14.49□□□□□ -0.09
CCDC40-213ENST00000574933 OSR1Q8TAX0 266 aaPredicted RBP14.49□□□□□ -0.09
CCDC40-213ENST00000574933 CD300LFQ8TDQ1 290 aa14.49□□□□□ -0.09
CCDC40-213ENST00000574933 FLYWCH2Q96CP2 140 aaKnown RBP14.49□□□□□ -0.09
CCDC40-213ENST00000574933 RITA1Q96K30 269 aa14.49□□□□□ -0.09
CCDC40-213ENST00000574933 TSC22D3Q99576 134 aa14.49□□□□□ -0.09
CCDC40-213ENST00000574933 RANBP3Q9H6Z4 567 aaPredicted RBP14.49□□□□□ -0.09
CCDC40-213ENST00000574933 TBC1D24Q9ULP9 559 aa14.49□□□□□ -0.09
CCDC40-213ENST00000574933 VSIG4Q9Y279 399 aa14.49□□□□□ -0.09
CCDC40-213ENST00000574933 MPPED1O15442 326 aa14.48□□□□□ -0.09
CCDC40-213ENST00000574933 FCGR3BO75015 233 aa14.48□□□□□ -0.09
CCDC40-213ENST00000574933 SPDEFO95238 335 aa14.48□□□□□ -0.09
CCDC40-213ENST00000574933 AMY1AP04745 511 aa14.48□□□□□ -0.09
CCDC40-213ENST00000574933 RLN1P04808 185 aa14.48□□□□□ -0.09
CCDC40-213ENST00000574933 F2RL1P55085 397 aa14.48□□□□□ -0.09
CCDC40-213ENST00000574933 PIGPP57054 158 aa14.48□□□□□ -0.09
CCDC40-213ENST00000574933 SRSF2Q01130 221 aaKnown RBP14.48□□□□□ -0.09
CCDC40-213ENST00000574933 RBMS2Q15434 407 aaKnown RBP14.48□□□□□ -0.09
CCDC40-213ENST00000574933 ABCA11PQ4W5N1 156 aa14.48□□□□□ -0.09
CCDC40-213ENST00000574933 C11orf88Q6PI97 169 aa14.48□□□□□ -0.09
CCDC40-213ENST00000574933 FAM71E2Q8N5Q1 922 aa14.48□□□□□ -0.09
CCDC40-213ENST00000574933 C5orf56Q8N8D9 126 aa14.48□□□□□ -0.09
CCDC40-213ENST00000574933 Q8N9W7 124 aa14.48□□□□□ -0.09
CCDC40-213ENST00000574933 CCDC71LQ8N9Z2 235 aa14.48□□□□□ -0.09
CCDC40-213ENST00000574933 OR4S2Q8NH73 311 aa14.48□□□□□ -0.09
CCDC40-213ENST00000574933 RBMXL1Q96E39 390 aaKnown RBP14.48□□□□□ -0.09
CCDC40-213ENST00000574933 C14orf166Q9Y224 244 aaKnown RBP14.48□□□□□ -0.09
CCDC40-213ENST00000574933 LINC00854A0A1B0GVQ3 168 aa14.47□□□□□ -0.09
CCDC40-213ENST00000574933 NBR2O15453 112 aa14.47□□□□□ -0.09
CCDC40-213ENST00000574933 TSPAN9O75954 239 aa14.47□□□□□ -0.09
CCDC40-213ENST00000574933 NDUFB6O95139 128 aa14.47□□□□□ -0.09
CCDC40-213ENST00000574933 NDUFA7O95182 113 aa14.47□□□□□ -0.09
CCDC40-213ENST00000574933 IGLV2-23P01705 113 aa14.47□□□□□ -0.09
CCDC40-213ENST00000574933 PI3P19957 117 aa14.47□□□□□ -0.09
CCDC40-213ENST00000574933 TBC1D26Q86UD7 250 aa14.47□□□□□ -0.09
CCDC40-213ENST00000574933 SPAG16Q8N0X2 631 aa14.47□□□□□ -0.09
CCDC40-213ENST00000574933 Q8N2B8 174 aa14.47□□□□□ -0.09
CCDC40-213ENST00000574933 OR51H1Q8NH63 302 aa14.47□□□□□ -0.09
CCDC40-213ENST00000574933 TSNAXQ99598 290 aaKnown RBP14.47□□□□□ -0.09
CCDC40-213ENST00000574933 NPFFR1Q9GZQ6 430 aa14.47□□□□□ -0.09
CCDC40-213ENST00000574933 LIN7CQ9NUP9 197 aaKnown RBP14.47□□□□□ -0.09
CCDC40-213ENST00000574933 COPZ2Q9P299 210 aa14.47□□□□□ -0.09
CCDC40-213ENST00000574933 B3GALNT1O75752 331 aa14.46□□□□□ -0.09
CCDC40-213ENST00000574933 CRYZL1O95825 349 aa14.46□□□□□ -0.09
CCDC40-213ENST00000574933 VSIG10L2P0DP72 767 aa14.46□□□□□ -0.09
CCDC40-213ENST00000574933 CNTFRP26992 372 aa14.46□□□□□ -0.09
CCDC40-213ENST00000574933 SLC6A1P30531 599 aa14.46□□□□□ -0.09
CCDC40-213ENST00000574933 CCR6P51684 374 aa14.46□□□□□ -0.09
CCDC40-213ENST00000574933 RPS16P62249 146 aaKnown RBP14.46□□□□□ -0.09
CCDC40-213ENST00000574933 MMDQ15546 238 aa14.46□□□□□ -0.09
CCDC40-213ENST00000574933 POC5Q8NA72 575 aa14.46□□□□□ -0.09
CCDC40-213ENST00000574933 PLEKHA2Q9HB19 425 aa14.46□□□□□ -0.09
CCDC40-213ENST00000574933 COL6A5A8TX70 2615 aa14.46□□□□□ -0.09
CCDC40-213ENST00000574933 SRRM4A7MD48 611 aaKnown RBP14.45□□□□□ -0.1
CCDC40-213ENST00000574933 RRHO14718 337 aa14.45□□□□□ -0.1
CCDC40-213ENST00000574933 HPRT1P00492 218 aa14.45□□□□□ -0.1
CCDC40-213ENST00000574933 CRYBA1P05813 215 aa14.45□□□□□ -0.1
CCDC40-213ENST00000574933 CRYGBP07316 175 aa14.45□□□□□ -0.1
CCDC40-213ENST00000574933 HKR1P10072 659 aa14.45□□□□□ -0.1
CCDC40-213ENST00000574933 RELBQ01201 579 aa14.45□□□□□ -0.1
CCDC40-213ENST00000574933 PSG5Q15238 335 aa14.45□□□□□ -0.1
CCDC40-213ENST00000574933 POU2AF1Q16633 256 aa14.45□□□□□ -0.1
CCDC40-213ENST00000574933 ZNF585BQ52M93 769 aa14.45□□□□□ -0.1
CCDC40-213ENST00000574933 OR2B11Q5JQS5 317 aa14.45□□□□□ -0.1
CCDC40-213ENST00000574933 TET2Q6N021 2002 aaPredicted RBP14.45□□□□□ -0.1
CCDC40-213ENST00000574933 TMEM230Q96A57 120 aa14.45□□□□□ -0.1
CCDC40-213ENST00000574933 HARBI1Q96MB7 349 aa14.45□□□□□ -0.1
CCDC40-213ENST00000574933 C16orf95Q9H693 158 aa14.45□□□□□ -0.1
CCDC40-213ENST00000574933 CRYM-AS1A6NIL9 109 aa14.44□□□□□ -0.1
CCDC40-213ENST00000574933 H0Y980 276 aa14.44□□□□□ -0.1
CCDC40-213ENST00000574933 SHOXO15266 292 aa14.44□□□□□ -0.1
CCDC40-213ENST00000574933 RAMP3O60896 148 aa14.44□□□□□ -0.1
CCDC40-213ENST00000574933 BLCAPP62952 87 aa14.44□□□□□ -0.1
CCDC40-213ENST00000574933 C5orf64Q2M2E5 130 aa14.44□□□□□ -0.1
CCDC40-213ENST00000574933 KRTAP24-1Q3LI83 254 aa14.44□□□□□ -0.1
CCDC40-213ENST00000574933 MZT2BQ6NZ67 158 aa14.44□□□□□ -0.1
CCDC40-213ENST00000574933 Q6ZSV7 163 aa14.44□□□□□ -0.1
CCDC40-213ENST00000574933 CADM3Q8N126 398 aa14.44□□□□□ -0.1
CCDC40-213ENST00000574933 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.44□□□□□ -0.1
CCDC40-213ENST00000574933 GALNT14Q96FL9 552 aa14.44□□□□□ -0.1
CCDC40-213ENST00000574933 PRSS22Q9GZN4 317 aa14.44□□□□□ -0.1
CCDC40-213ENST00000574933 NAA60Q9H7X0 242 aa14.44□□□□□ -0.1
CCDC40-213ENST00000574933 ZNF702PQ9H963 129 aa14.44□□□□□ -0.1
CCDC40-213ENST00000574933 COMMD9Q9P000 198 aa14.44□□□□□ -0.1
CCDC40-213ENST00000574933 KIAA1456Q9P272 454 aa14.44□□□□□ -0.1
CCDC40-213ENST00000574933 C3orf85A0A1B0GTC6 90 aa14.43□□□□□ -0.1
CCDC40-213ENST00000574933 NCBP2LA6PVI3 153 aaKnown RBP14.43□□□□□ -0.1
CCDC40-213ENST00000574933 HRASP01112 189 aa14.43□□□□□ -0.1
CCDC40-213ENST00000574933 TAS2R31P59538 309 aa14.43□□□□□ -0.1
CCDC40-213ENST00000574933 UBE2MP61081 183 aaKnown RBP14.43□□□□□ -0.1
CCDC40-213ENST00000574933 UBE2KP61086 200 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms