RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 ATP5G1P05496 136 aa0.78□□□□□ -2.28
CDC27-216ENST00000574304 KDELR2P33947 212 aa0.78□□□□□ -2.28
CDC27-216ENST00000574304 AKR1C3P42330 323 aa0.78□□□□□ -2.28
CDC27-216ENST00000574304 AQP4P55087 323 aa0.78□□□□□ -2.28
CDC27-216ENST00000574304 H2BFSP57053 126 aa0.78□□□□□ -2.28
CDC27-216ENST00000574304 BTN3A2P78410 334 aa0.78□□□□□ -2.28
CDC27-216ENST00000574304 PLCXD2Q0VAA5 305 aa0.78□□□□□ -2.28
CDC27-216ENST00000574304 GNA13Q14344 377 aa0.78□□□□□ -2.28
CDC27-216ENST00000574304 CDK5R1Q15078 307 aa0.78□□□□□ -2.28
CDC27-216ENST00000574304 SLC36A1Q7Z2H8 476 aa0.78□□□□□ -2.28
CDC27-216ENST00000574304 SPERTQ8NA61 448 aa0.78□□□□□ -2.28
CDC27-216ENST00000574304 OR1L8Q8NGR8 309 aa0.78□□□□□ -2.28
CDC27-216ENST00000574304 STOML3Q8TAV4 291 aa0.78□□□□□ -2.28
CDC27-216ENST00000574304 SLC7A6Q92536 515 aa0.78□□□□□ -2.28
CDC27-216ENST00000574304 PPCDCQ96CD2 204 aa0.78□□□□□ -2.28
CDC27-216ENST00000574304 TMA16Q96EY4 203 aaKnown RBP0.78□□□□□ -2.28
CDC27-216ENST00000574304 EMC3Q9P0I2 261 aa0.78□□□□□ -2.28
CDC27-216ENST00000574304 CPAMD8Q8IZJ3 1885 aa0.78□□□□□ -2.29
CDC27-216ENST00000574304 DIDO1Q9BTC0 2240 aaKnown RBP0.77□□□□□ -2.29
CDC27-216ENST00000574304 SMLR1H3BR10 107 aa0.77□□□□□ -2.29
CDC27-216ENST00000574304 LINC00614P0C842 121 aa0.77□□□□□ -2.29
CDC27-216ENST00000574304 HOXC5Q00444 222 aa0.77□□□□□ -2.29
CDC27-216ENST00000574304 EMX1Q04741 257 aaPredicted RBP0.77□□□□□ -2.29
CDC27-216ENST00000574304 SURF2Q15527 256 aaPredicted RBP0.77□□□□□ -2.29
CDC27-216ENST00000574304 C4orf26Q17RF5 130 aa0.77□□□□□ -2.29
CDC27-216ENST00000574304 CLEC12BQ2HXU8 276 aa0.77□□□□□ -2.29
CDC27-216ENST00000574304 NAA40Q86UY6 237 aa0.77□□□□□ -2.29
CDC27-216ENST00000574304 BOD1L2Q8IYS8 172 aa0.77□□□□□ -2.29
CDC27-216ENST00000574304 C15orf53Q8NAA6 179 aa0.77□□□□□ -2.29
CDC27-216ENST00000574304 OR5AK3PQ8NH89 298 aa0.77□□□□□ -2.29
CDC27-216ENST00000574304 CPNE2Q96FN4 548 aaPredicted RBP0.77□□□□□ -2.29
CDC27-216ENST00000574304 IMMP2LQ96T52 175 aa0.77□□□□□ -2.29
CDC27-216ENST00000574304 TMEM222Q9H0R3 208 aa0.77□□□□□ -2.29
CDC27-216ENST00000574304 CHMP5Q9NZZ3 219 aa0.77□□□□□ -2.29
CDC27-216ENST00000574304 KLK5Q9Y337 293 aaPredicted RBP0.77□□□□□ -2.29
CDC27-216ENST00000574304 TIMM9Q9Y5J7 89 aa0.77□□□□□ -2.29
CDC27-216ENST00000574304 HEATR5BQ9P2D3 2071 aa0.77□□□□□ -2.29
CDC27-216ENST00000574304 A0A087WUU8 490 aa0.76□□□□□ -2.29
CDC27-216ENST00000574304 MEIKINA0A087WXM9 373 aa0.76□□□□□ -2.29
CDC27-216ENST00000574304 GOLGA8RI6L899 631 aa0.76□□□□□ -2.29
CDC27-216ENST00000574304 AZIN1O14977 448 aa0.76□□□□□ -2.29
CDC27-216ENST00000574304 CIAO1O76071 339 aa0.76□□□□□ -2.29
CDC27-216ENST00000574304 CXCL2P19875 107 aa0.76□□□□□ -2.29
CDC27-216ENST00000574304 CXCL3P19876 107 aa0.76□□□□□ -2.29
CDC27-216ENST00000574304 ETV1P50549 477 aa0.76□□□□□ -2.29
CDC27-216ENST00000574304 FAM45BPQ6NSW5 357 aa0.76□□□□□ -2.29
CDC27-216ENST00000574304 LYZL1Q6UWQ5 148 aa0.76□□□□□ -2.29
CDC27-216ENST00000574304 C7orf65Q6ZTY9 151 aa0.76□□□□□ -2.29
CDC27-216ENST00000574304 RIBC1Q8N443 379 aaPredicted RBP0.76□□□□□ -2.29
CDC27-216ENST00000574304 OR10D3Q8NH80 312 aa0.76□□□□□ -2.29
CDC27-216ENST00000574304 ZNF675Q8TD23 568 aa0.76□□□□□ -2.29
CDC27-216ENST00000574304 ZNF514Q96K75 400 aaPredicted RBP0.76□□□□□ -2.29
CDC27-216ENST00000574304 RBP7Q96R05 134 aa0.76□□□□□ -2.29
CDC27-216ENST00000574304 TMEM109Q9BVC6 243 aa0.76□□□□□ -2.29
CDC27-216ENST00000574304 C1orf109Q9NX04 203 aa0.76□□□□□ -2.29
CDC27-216ENST00000574304 RBM7Q9Y580 266 aaKnown RBP0.76□□□□□ -2.29
CDC27-216ENST00000574304 PTPRSQ13332 1948 aa0.76□□□□□ -2.29
CDC27-216ENST00000574304 ARFGEF3Q5TH69 2177 aa0.75□□□□□ -2.29
CDC27-216ENST00000574304 IGHV1-18A0A0C4DH31 117 aa0.75□□□□□ -2.29
CDC27-216ENST00000574304 OR6C6A6NF89 314 aa0.75□□□□□ -2.29
CDC27-216ENST00000574304 ZNF879B4DU55 563 aa0.75□□□□□ -2.29
CDC27-216ENST00000574304 H3BT86 120 aa0.75□□□□□ -2.29
CDC27-216ENST00000574304 ORC5O43913 435 aa0.75□□□□□ -2.29
CDC27-216ENST00000574304 MRPS14O60783 128 aaKnown RBP0.75□□□□□ -2.29
CDC27-216ENST00000574304 HLA-DQB2P05538 268 aa0.75□□□□□ -2.29
CDC27-216ENST00000574304 CCR7P32248 378 aa0.75□□□□□ -2.29
CDC27-216ENST00000574304 CA5AP35218 305 aa0.75□□□□□ -2.29
CDC27-216ENST00000574304 FXYD7P58549 80 aa0.75□□□□□ -2.29
CDC27-216ENST00000574304 TPI1P60174 286 aa0.75□□□□□ -2.29
CDC27-216ENST00000574304 TBPL1P62380 186 aa0.75□□□□□ -2.29
CDC27-216ENST00000574304 ANGPT1Q15389 498 aa0.75□□□□□ -2.29
CDC27-216ENST00000574304 MOGQ16653 247 aa0.75□□□□□ -2.29
CDC27-216ENST00000574304 MIAQ16674 131 aa0.75□□□□□ -2.29
CDC27-216ENST00000574304 HLA-DRB5Q30154 266 aa0.75□□□□□ -2.29
CDC27-216ENST00000574304 SAPCD1Q5SSQ6 148 aa0.75□□□□□ -2.29
CDC27-216ENST00000574304 CRLF3Q8IUI8 442 aa0.75□□□□□ -2.29
CDC27-216ENST00000574304 C17orf78Q8N4C9 275 aa0.75□□□□□ -2.29
CDC27-216ENST00000574304 OR52E4Q8NGH9 312 aa0.75□□□□□ -2.29
CDC27-216ENST00000574304 MS4A6EQ96DS6 147 aa0.75□□□□□ -2.29
CDC27-216ENST00000574304 ADAT1Q9BUB4 502 aaKnown RBP0.75□□□□□ -2.29
CDC27-216ENST00000574304 NSRP1Q9H0G5 558 aaKnown RBP0.75□□□□□ -2.29
CDC27-216ENST00000574304 TREM1Q9NP99 234 aa0.75□□□□□ -2.29
CDC27-216ENST00000574304 PCYT1BQ9Y5K3 369 aaPredicted RBP0.75□□□□□ -2.29
CDC27-216ENST00000574304 SIPA1L1O43166 1804 aa0.75□□□□□ -2.29
CDC27-216ENST00000574304 NUP153P49790 1475 aaKnown RBP0.74□□□□□ -2.29
CDC27-216ENST00000574304 ROS1P08922 2347 aa0.74□□□□□ -2.29
CDC27-216ENST00000574304 TMED7-TICAM2A0A0A6YYA0 188 aa0.74□□□□□ -2.29
CDC27-216ENST00000574304 PLA2G10O15496 165 aa0.74□□□□□ -2.29
CDC27-216ENST00000574304 CREBL2O60519 120 aaPredicted RBP0.74□□□□□ -2.29
CDC27-216ENST00000574304 SERPINA7P05543 415 aa0.74□□□□□ -2.29
CDC27-216ENST00000574304 CD79BP40259 229 aa0.74□□□□□ -2.29
CDC27-216ENST00000574304 SLAMF1Q13291 335 aa0.74□□□□□ -2.29
CDC27-216ENST00000574304 USF2Q15853 346 aaPredicted RBP0.74□□□□□ -2.29
CDC27-216ENST00000574304 RASSF6Q6ZTQ3 369 aa0.74□□□□□ -2.29
CDC27-216ENST00000574304 SPATA24Q86W54 205 aa0.74□□□□□ -2.29
CDC27-216ENST00000574304 RAB2BQ8WUD1 216 aa0.74□□□□□ -2.29
CDC27-216ENST00000574304 IGKV2D-26A0A0A0MRZ7 120 aa0.73□□□□□ -2.29
CDC27-216ENST00000574304 TRAV38-1A0A0B4J264 116 aa0.73□□□□□ -2.29
CDC27-216ENST00000574304 A0A0D9SEW6 157 aa0.73□□□□□ -2.29
CDC27-216ENST00000574304 TMEM269A0A1B0GVZ9 245 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms