RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 DCSTAMPQ9H295 470 aa13.44□□□□□ -0.26
SMG6-214ENST00000573827 SSR3Q9UNL2 185 aa13.44□□□□□ -0.26
SMG6-214ENST00000573827 SLURP1P55000 103 aa13.43□□□□□ -0.26
SMG6-214ENST00000573827 EIF4EBP1Q13541 118 aaPredicted RBP13.43□□□□□ -0.26
SMG6-214ENST00000573827 HARBI1Q96MB7 349 aa13.43□□□□□ -0.26
SMG6-214ENST00000573827 PRR25Q96S07 402 aa13.43□□□□□ -0.26
SMG6-214ENST00000573827 CENPOQ9BU64 300 aa13.43□□□□□ -0.26
SMG6-214ENST00000573827 RHBDL2Q9NX52 303 aa13.43□□□□□ -0.26
SMG6-214ENST00000573827 ZMAT5Q9UDW3 170 aaKnown RBP13.43□□□□□ -0.26
SMG6-214ENST00000573827 IGKV1D-13A0A0B4J2D9 117 aa13.42□□□□□ -0.26
SMG6-214ENST00000573827 TUSC2O75896 110 aa13.42□□□□□ -0.26
SMG6-214ENST00000573827 BRI3O95415 125 aa13.42□□□□□ -0.26
SMG6-214ENST00000573827 HLA-DQB1P01920 261 aa13.42□□□□□ -0.26
SMG6-214ENST00000573827 IGKV1-13P0DP09 117 aa13.42□□□□□ -0.26
SMG6-214ENST00000573827 TALDO1P37837 337 aa13.42□□□□□ -0.26
SMG6-214ENST00000573827 TAGLNQ01995 201 aaKnown RBP13.42□□□□□ -0.26
SMG6-214ENST00000573827 GRPEL2Q8TAA5 225 aa13.42□□□□□ -0.26
SMG6-214ENST00000573827 ABHD5Q8WTS1 349 aa13.42□□□□□ -0.26
SMG6-214ENST00000573827 MS4A10Q96PG2 267 aa13.42□□□□□ -0.26
SMG6-214ENST00000573827 GINS4Q9BRT9 223 aa13.42□□□□□ -0.26
SMG6-214ENST00000573827 LINC01619G3V211 115 aa13.41□□□□□ -0.26
SMG6-214ENST00000573827 OVOL1O14753 267 aa13.41□□□□□ -0.26
SMG6-214ENST00000573827 RBMXL2O75526 392 aaKnown RBP13.41□□□□□ -0.26
SMG6-214ENST00000573827 IGHV3-11P01762 117 aa13.41□□□□□ -0.26
SMG6-214ENST00000573827 ECI1P42126 302 aa13.41□□□□□ -0.26
SMG6-214ENST00000573827 INSL3P51460 131 aa13.41□□□□□ -0.26
SMG6-214ENST00000573827 SCAND1P57086 179 aa13.41□□□□□ -0.26
SMG6-214ENST00000573827 NEDD8Q15843 81 aa13.41□□□□□ -0.26
SMG6-214ENST00000573827 VAX1Q5SQQ9 334 aa13.41□□□□□ -0.26
SMG6-214ENST00000573827 POC5Q8NA72 575 aa13.41□□□□□ -0.26
SMG6-214ENST00000573827 ST6GALNAC5Q9BVH7 336 aa13.41□□□□□ -0.26
SMG6-214ENST00000573827 SLA2Q9H6Q3 261 aa13.41□□□□□ -0.26
SMG6-214ENST00000573827 OR2W1Q9Y3N9 320 aa13.41□□□□□ -0.26
SMG6-214ENST00000573827 H3BUA1 57 aa13.4□□□□□ -0.26
SMG6-214ENST00000573827 SCGNO76038 276 aa13.4□□□□□ -0.26
SMG6-214ENST00000573827 CTXN2P0C2S0 81 aa13.4□□□□□ -0.26
SMG6-214ENST00000573827 RRASP10301 218 aa13.4□□□□□ -0.26
SMG6-214ENST00000573827 CD36P16671 472 aa13.4□□□□□ -0.26
SMG6-214ENST00000573827 NFYAP23511 347 aaPredicted RBP13.4□□□□□ -0.26
SMG6-214ENST00000573827 BRWD1-AS2P59051 145 aa13.4□□□□□ -0.26
SMG6-214ENST00000573827 TPPP2P59282 170 aa13.4□□□□□ -0.26
SMG6-214ENST00000573827 UBE2KP61086 200 aa13.4□□□□□ -0.26
SMG6-214ENST00000573827 RPL30P62888 115 aaKnown RBP13.4□□□□□ -0.26
SMG6-214ENST00000573827 PITPNAQ00169 270 aa13.4□□□□□ -0.26
SMG6-214ENST00000573827 MXD1Q05195 221 aa13.4□□□□□ -0.26
SMG6-214ENST00000573827 PRSS8Q16651 343 aa13.4□□□□□ -0.26
SMG6-214ENST00000573827 CNIH2Q6PI25 160 aa13.4□□□□□ -0.26
SMG6-214ENST00000573827 ZNF645Q8N7E2 425 aa13.4□□□□□ -0.26
SMG6-214ENST00000573827 ADTRPQ96IZ2 230 aa13.4□□□□□ -0.26
SMG6-214ENST00000573827 ANXA10Q9UJ72 324 aa13.4□□□□□ -0.26
SMG6-214ENST00000573827 ZNF256Q9Y2P7 627 aaPredicted RBP13.4□□□□□ -0.26
SMG6-214ENST00000573827 ETV7Q9Y603 341 aa13.4□□□□□ -0.26
SMG6-214ENST00000573827 LOC100506127A0A0U1RQW1 187 aa13.39□□□□□ -0.27
SMG6-214ENST00000573827 SHOXO15266 292 aa13.39□□□□□ -0.27
SMG6-214ENST00000573827 CRYZL1O95825 349 aa13.39□□□□□ -0.27
SMG6-214ENST00000573827 HSPB1P04792 205 aaKnown RBP13.39□□□□□ -0.27
SMG6-214ENST00000573827 RTL8BQ17RB0 113 aa13.39□□□□□ -0.27
SMG6-214ENST00000573827 ACSM6Q6P461 480 aa13.39□□□□□ -0.27
SMG6-214ENST00000573827 OVCH2Q7RTZ1 564 aa13.39□□□□□ -0.27
SMG6-214ENST00000573827 ZNF429Q86V71 674 aa13.39□□□□□ -0.27
SMG6-214ENST00000573827 TEX45Q8NA69 505 aa13.39□□□□□ -0.27
SMG6-214ENST00000573827 OR5T1Q8NG75 326 aa13.39□□□□□ -0.27
SMG6-214ENST00000573827 RBMX2Q9Y388 322 aaKnown RBP13.39□□□□□ -0.27
SMG6-214ENST00000573827 J3QRK9 145 aa13.38□□□□□ -0.27
SMG6-214ENST00000573827 TRGV3P03979 118 aa13.38□□□□□ -0.27
SMG6-214ENST00000573827 TGFBR1P36897 503 aa13.38□□□□□ -0.27
SMG6-214ENST00000573827 CD69Q07108 199 aa13.38□□□□□ -0.27
SMG6-214ENST00000573827 DCTN2Q13561 401 aaKnown RBP13.38□□□□□ -0.27
SMG6-214ENST00000573827 IDO2Q6ZQW0 420 aa13.38□□□□□ -0.27
SMG6-214ENST00000573827 OSR1Q8TAX0 266 aaPredicted RBP13.38□□□□□ -0.27
SMG6-214ENST00000573827 TMEM68Q96MH6 324 aa13.38□□□□□ -0.27
SMG6-214ENST00000573827 RBM7Q9Y580 266 aaKnown RBP13.38□□□□□ -0.27
SMG6-214ENST00000573827 CNIH1O95406 144 aa13.37□□□□□ -0.27
SMG6-214ENST00000573827 GNG2P59768 71 aa13.37□□□□□ -0.27
SMG6-214ENST00000573827 DYRK1AQ13627 763 aa13.37□□□□□ -0.27
SMG6-214ENST00000573827 IDNKQ5T6J7 187 aa13.37□□□□□ -0.27
SMG6-214ENST00000573827 GVQW1Q8N7I0 195 aa13.37□□□□□ -0.27
SMG6-214ENST00000573827 ADAD2Q8NCV1 583 aaKnown RBP13.37□□□□□ -0.27
SMG6-214ENST00000573827 YIPF6Q96EC8 236 aa13.37□□□□□ -0.27
SMG6-214ENST00000573827 TINAGL1Q9GZM7 467 aaPredicted RBP13.37□□□□□ -0.27
SMG6-214ENST00000573827 AUNIPQ9H7T9 357 aa13.37□□□□□ -0.27
SMG6-214ENST00000573827 SACSQ9NZJ4 4579 aa13.37□□□□□ -0.27
SMG6-214ENST00000573827 TRAV18A0A075B6X5 111 aa13.36□□□□□ -0.27
SMG6-214ENST00000573827 A0A0A6YYH2 397 aa13.36□□□□□ -0.27
SMG6-214ENST00000573827 A6NJ64 397 aa13.36□□□□□ -0.27
SMG6-214ENST00000573827 SAA1P0DJI8 122 aaPredicted RBP13.36□□□□□ -0.27
SMG6-214ENST00000573827 PTHLHP12272 177 aa13.36□□□□□ -0.27
SMG6-214ENST00000573827 DEFA5Q01523 94 aa13.36□□□□□ -0.27
SMG6-214ENST00000573827 HOGA1Q86XE5 327 aa13.36□□□□□ -0.27
SMG6-214ENST00000573827 ZNF430Q9H8G1 570 aaPredicted RBP13.36□□□□□ -0.27
SMG6-214ENST00000573827 SPATA2Q9UM82 520 aa13.36□□□□□ -0.27
SMG6-214ENST00000573827 MSGN1A6NI15 193 aa13.35□□□□□ -0.27
SMG6-214ENST00000573827 TRIM64CA6NLI5 447 aa13.35□□□□□ -0.27
SMG6-214ENST00000573827 FCGR3BO75015 233 aa13.35□□□□□ -0.27
SMG6-214ENST00000573827 SAP30O75446 220 aa13.35□□□□□ -0.27
SMG6-214ENST00000573827 VMA21Q3ZAQ7 101 aa13.35□□□□□ -0.27
SMG6-214ENST00000573827 IL34Q6ZMJ4 242 aa13.35□□□□□ -0.27
SMG6-214ENST00000573827 BEST4Q8NFU0 473 aa13.35□□□□□ -0.27
SMG6-214ENST00000573827 SRSF12Q8WXF0 261 aaKnown RBP13.35□□□□□ -0.27
SMG6-214ENST00000573827 SNAPC3Q92966 411 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms