RNA–Protein interactions for RNA: ENST00000571545.1

CIITA-207, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 3

Gene CIITA, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-207ENST00000571545 MRPS7Q9Y2R9 242 aaKnown RBP7.54□□□□□ -1.2
CIITA-207ENST00000571545 KCNK7Q9Y2U2 307 aa7.54□□□□□ -1.2
CIITA-207ENST00000571545 PRELID3BQ9Y3B1 194 aa7.54□□□□□ -1.2
CIITA-207ENST00000571545 A0A075B6Q4 140 aa7.53□□□□□ -1.2
CIITA-207ENST00000571545 IGHV4OR15-8A0A075B7B6 117 aa7.53□□□□□ -1.2
CIITA-207ENST00000571545 A0A087WW49 117 aa7.53□□□□□ -1.2
CIITA-207ENST00000571545 NOTOA8MTQ0 251 aa7.53□□□□□ -1.2
CIITA-207ENST00000571545 FCN1O00602 326 aa7.53□□□□□ -1.2
CIITA-207ENST00000571545 ACTL6BO94805 426 aa7.53□□□□□ -1.2
CIITA-207ENST00000571545 EGR2P11161 476 aaPredicted RBP7.53□□□□□ -1.2
CIITA-207ENST00000571545 PSMB9P28065 219 aa7.53□□□□□ -1.2
CIITA-207ENST00000571545 SLURP1P55000 103 aa7.53□□□□□ -1.2
CIITA-207ENST00000571545 OR10A3P58181 314 aa7.53□□□□□ -1.2
CIITA-207ENST00000571545 TMEM177Q53S58 311 aa7.53□□□□□ -1.2
CIITA-207ENST00000571545 IGSF11Q5DX21 431 aa7.53□□□□□ -1.2
CIITA-207ENST00000571545 ASPHD1Q5U4P2 390 aa7.53□□□□□ -1.2
CIITA-207ENST00000571545 UBE2UQ5VVX9 321 aa7.53□□□□□ -1.2
CIITA-207ENST00000571545 C22orf42Q6IC83 251 aa7.53□□□□□ -1.2
CIITA-207ENST00000571545 H1FOOQ8IZA3 346 aaPredicted RBP7.53□□□□□ -1.2
CIITA-207ENST00000571545 TEX45Q8NA69 505 aa7.53□□□□□ -1.2
CIITA-207ENST00000571545 DLX4Q92988 240 aaPredicted RBP7.53□□□□□ -1.2
CIITA-207ENST00000571545 USMG5Q96IX5 58 aa7.53□□□□□ -1.2
CIITA-207ENST00000571545 RHOVQ96L33 236 aa7.53□□□□□ -1.2
CIITA-207ENST00000571545 PHB2Q99623 299 aa7.53□□□□□ -1.2
CIITA-207ENST00000571545 FAM103A1Q9BTL3 118 aaKnown RBP7.53□□□□□ -1.2
CIITA-207ENST00000571545 SDHAF2Q9NX18 166 aa7.53□□□□□ -1.2
CIITA-207ENST00000571545 SSR3Q9UNL2 185 aa7.53□□□□□ -1.2
CIITA-207ENST00000571545 COL7A1Q02388 2944 aa7.52□□□□□ -1.21
CIITA-207ENST00000571545 TMEM127O75204 238 aa7.52□□□□□ -1.21
CIITA-207ENST00000571545 PROP1O75360 226 aa7.52□□□□□ -1.21
CIITA-207ENST00000571545 GSTT2P0CG29 244 aa7.52□□□□□ -1.21
CIITA-207ENST00000571545 GSTT2BP0CG30 244 aa7.52□□□□□ -1.21
CIITA-207ENST00000571545 GP9P14770 177 aa7.52□□□□□ -1.21
CIITA-207ENST00000571545 GNG2P59768 71 aa7.52□□□□□ -1.21
CIITA-207ENST00000571545 UBE2KP61086 200 aa7.52□□□□□ -1.21
CIITA-207ENST00000571545 TATDN3Q17R31 274 aa7.52□□□□□ -1.21
CIITA-207ENST00000571545 HACD4Q5VWC8 232 aa7.52□□□□□ -1.21
CIITA-207ENST00000571545 ZNF645Q8N7E2 425 aa7.52□□□□□ -1.21
CIITA-207ENST00000571545 VSTM2AQ8TAG5 236 aa7.52□□□□□ -1.21
CIITA-207ENST00000571545 RBMXL1Q96E39 390 aaKnown RBP7.52□□□□□ -1.21
CIITA-207ENST00000571545 MS4A10Q96PG2 267 aa7.52□□□□□ -1.21
CIITA-207ENST00000571545 ALX4Q9H161 411 aaPredicted RBP7.52□□□□□ -1.21
CIITA-207ENST00000571545 TPSG1Q9NRR2 321 aa7.52□□□□□ -1.21
CIITA-207ENST00000571545 DNAH3Q8TD57 4116 aa7.51□□□□□ -1.21
CIITA-207ENST00000571545 A0A0B4J203 849 aa7.51□□□□□ -1.21
CIITA-207ENST00000571545 MPPED1O15442 326 aa7.51□□□□□ -1.21
CIITA-207ENST00000571545 CRYZL1O95825 349 aa7.51□□□□□ -1.21
CIITA-207ENST00000571545 IGLV2-23P01705 113 aa7.51□□□□□ -1.21
CIITA-207ENST00000571545 IGHV3-11P01762 117 aa7.51□□□□□ -1.21
CIITA-207ENST00000571545 DUTP33316 252 aaKnown RBP7.51□□□□□ -1.21
CIITA-207ENST00000571545 CDNFQ49AH0 187 aa7.51□□□□□ -1.21
CIITA-207ENST00000571545 CNIH2Q6PI25 160 aa7.51□□□□□ -1.21
CIITA-207ENST00000571545 KCTD9Q7L273 389 aa7.51□□□□□ -1.21
CIITA-207ENST00000571545 SLC25A42Q86VD7 318 aa7.51□□□□□ -1.21
CIITA-207ENST00000571545 ANKRD13BQ86YJ7 626 aa7.51□□□□□ -1.21
CIITA-207ENST00000571545 BVESQ8NE79 360 aa7.51□□□□□ -1.21
CIITA-207ENST00000571545 OR4S2Q8NH73 311 aa7.51□□□□□ -1.21
CIITA-207ENST00000571545 HSD17B10Q99714 261 aaKnown RBP7.51□□□□□ -1.21
CIITA-207ENST00000571545 SPIN2AQ99865 258 aa7.51□□□□□ -1.21
CIITA-207ENST00000571545 SPIN2BQ9BPZ2 258 aa7.51□□□□□ -1.21
CIITA-207ENST00000571545 AIFM2Q9BRQ8 373 aa7.51□□□□□ -1.21
CIITA-207ENST00000571545 TINAGL1Q9GZM7 467 aaPredicted RBP7.51□□□□□ -1.21
CIITA-207ENST00000571545 ZMAT4Q9H898 229 aa7.51□□□□□ -1.21
CIITA-207ENST00000571545 TXNL4BQ9NX01 149 aaKnown RBP7.51□□□□□ -1.21
CIITA-207ENST00000571545 COA4Q9NYJ1 87 aa7.51□□□□□ -1.21
CIITA-207ENST00000571545 OR2W1Q9Y3N9 320 aa7.51□□□□□ -1.21
CIITA-207ENST00000571545 ETV7Q9Y603 341 aa7.51□□□□□ -1.21
CIITA-207ENST00000571545 A0A0A6YYH2 397 aa7.5□□□□□ -1.21
CIITA-207ENST00000571545 SHISA3A0PJX4 238 aa7.5□□□□□ -1.21
CIITA-207ENST00000571545 A6NJ64 397 aa7.5□□□□□ -1.21
CIITA-207ENST00000571545 FAM223BA6NKX1 122 aa7.5□□□□□ -1.21
CIITA-207ENST00000571545 H0Y980 276 aa7.5□□□□□ -1.21
CIITA-207ENST00000571545 C3orf84H3BNL1 204 aa7.5□□□□□ -1.21
CIITA-207ENST00000571545 TUSC2O75896 110 aa7.5□□□□□ -1.21
CIITA-207ENST00000571545 OR2A4O95047 310 aa7.5□□□□□ -1.21
CIITA-207ENST00000571545 ATP6V1G2O95670 118 aa7.5□□□□□ -1.21
CIITA-207ENST00000571545 CRYGBP07316 175 aa7.5□□□□□ -1.21
CIITA-207ENST00000571545 KIR2DS2P43631 304 aa7.5□□□□□ -1.21
CIITA-207ENST00000571545 PLA2G7Q13093 441 aa7.5□□□□□ -1.21
CIITA-207ENST00000571545 CDK10Q15131 360 aa7.5□□□□□ -1.21
CIITA-207ENST00000571545 TNXAQ16473 311 aa7.5□□□□□ -1.21
CIITA-207ENST00000571545 SFXN4Q6P4A7 337 aa7.5□□□□□ -1.21
CIITA-207ENST00000571545 OVCH2Q7RTZ1 564 aa7.5□□□□□ -1.21
CIITA-207ENST00000571545 FAM223AQ8IWN6 122 aa7.5□□□□□ -1.21
CIITA-207ENST00000571545 SGPP2Q8IWX5 399 aa7.5□□□□□ -1.21
CIITA-207ENST00000571545 MMD2Q8IY49 270 aa7.5□□□□□ -1.21
CIITA-207ENST00000571545 SPARTQ8N0X7 666 aa7.5□□□□□ -1.21
CIITA-207ENST00000571545 CASTOR1Q8WTX7 329 aa7.5□□□□□ -1.21
CIITA-207ENST00000571545 SRSF12Q8WXF0 261 aaKnown RBP7.5□□□□□ -1.21
CIITA-207ENST00000571545 ACOT12Q8WYK0 555 aa7.5□□□□□ -1.21
CIITA-207ENST00000571545 DDB2Q92466 427 aa7.5□□□□□ -1.21
CIITA-207ENST00000571545 SNAPC3Q92966 411 aa7.5□□□□□ -1.21
CIITA-207ENST00000571545 DCUN1D5Q9BTE7 237 aa7.5□□□□□ -1.21
CIITA-207ENST00000571545 RSRP1Q9BUV0 290 aa7.5□□□□□ -1.21
CIITA-207ENST00000571545 PEMTQ9UBM1 199 aa7.5□□□□□ -1.21
CIITA-207ENST00000571545 PEF1Q9UBV8 284 aaKnown RBP7.5□□□□□ -1.21
CIITA-207ENST00000571545 ZNF230Q9UIE0 474 aaPredicted RBP7.5□□□□□ -1.21
CIITA-207ENST00000571545 DAPK2Q9UIK4 370 aa7.5□□□□□ -1.21
CIITA-207ENST00000571545 AIREO43918 545 aa7.49□□□□□ -1.21
CIITA-207ENST00000571545 DHFRP00374 187 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms