RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 GSTT2P0CG29 244 aa9.59□□□□□ -0.87
CTDNEP1-205ENST00000570828 GSTT2BP0CG30 244 aa9.59□□□□□ -0.87
CTDNEP1-205ENST00000570828 EGR2P11161 476 aaPredicted RBP9.59□□□□□ -0.87
CTDNEP1-205ENST00000570828 INSL3P51460 131 aa9.59□□□□□ -0.87
CTDNEP1-205ENST00000570828 LINC00205P59089 165 aa9.59□□□□□ -0.87
CTDNEP1-205ENST00000570828 LCE1DQ5T752 114 aa9.59□□□□□ -0.87
CTDNEP1-205ENST00000570828 ASPHD1Q5U4P2 390 aa9.59□□□□□ -0.87
CTDNEP1-205ENST00000570828 C11orf87Q6NUJ2 197 aa9.59□□□□□ -0.87
CTDNEP1-205ENST00000570828 ZNF562Q6V9R5 426 aa9.59□□□□□ -0.87
CTDNEP1-205ENST00000570828 GRPEL2Q8TAA5 225 aa9.59□□□□□ -0.87
CTDNEP1-205ENST00000570828 CASTOR1Q8WTX7 329 aa9.59□□□□□ -0.87
CTDNEP1-205ENST00000570828 HARBI1Q96MB7 349 aa9.59□□□□□ -0.87
CTDNEP1-205ENST00000570828 PRR25Q96S07 402 aa9.59□□□□□ -0.87
CTDNEP1-205ENST00000570828 ZNF230Q9UIE0 474 aaPredicted RBP9.59□□□□□ -0.87
CTDNEP1-205ENST00000570828 NUBP2Q9Y5Y2 271 aa9.59□□□□□ -0.87
CTDNEP1-205ENST00000570828 COL7A1Q02388 2944 aa9.59□□□□□ -0.87
CTDNEP1-205ENST00000570828 NOTOA8MTQ0 251 aa9.58□□□□□ -0.88
CTDNEP1-205ENST00000570828 LINC01619G3V211 115 aa9.58□□□□□ -0.88
CTDNEP1-205ENST00000570828 LGALS1P09382 135 aaKnown RBP9.58□□□□□ -0.88
CTDNEP1-205ENST00000570828 TPPP2P59282 170 aa9.58□□□□□ -0.88
CTDNEP1-205ENST00000570828 RTL8BQ17RB0 113 aa9.58□□□□□ -0.88
CTDNEP1-205ENST00000570828 AKIRIN2Q53H80 203 aa9.58□□□□□ -0.88
CTDNEP1-205ENST00000570828 NR2C2APQ86WQ0 139 aa9.58□□□□□ -0.88
CTDNEP1-205ENST00000570828 SPARTQ8N0X7 666 aa9.58□□□□□ -0.88
CTDNEP1-205ENST00000570828 LFNGQ8NES3 379 aa9.58□□□□□ -0.88
CTDNEP1-205ENST00000570828 ALX4Q9H161 411 aaPredicted RBP9.58□□□□□ -0.88
CTDNEP1-205ENST00000570828 SLA2Q9H6Q3 261 aa9.58□□□□□ -0.88
CTDNEP1-205ENST00000570828 TXNL4BQ9NX01 149 aaKnown RBP9.58□□□□□ -0.88
CTDNEP1-205ENST00000570828 SDHAF2Q9NX18 166 aa9.58□□□□□ -0.88
CTDNEP1-205ENST00000570828 SCOCQ9UIL1 159 aa9.58□□□□□ -0.88
CTDNEP1-205ENST00000570828 STUB1Q9UNE7 303 aa9.58□□□□□ -0.88
CTDNEP1-205ENST00000570828 ZNF256Q9Y2P7 627 aaPredicted RBP9.58□□□□□ -0.88
CTDNEP1-205ENST00000570828 OVOL1O14753 267 aa9.57□□□□□ -0.88
CTDNEP1-205ENST00000570828 SCGNO76038 276 aa9.57□□□□□ -0.88
CTDNEP1-205ENST00000570828 CNIH1O95406 144 aa9.57□□□□□ -0.88
CTDNEP1-205ENST00000570828 LY86O95711 162 aa9.57□□□□□ -0.88
CTDNEP1-205ENST00000570828 DTYMKP23919 212 aa9.57□□□□□ -0.88
CTDNEP1-205ENST00000570828 FGF9P31371 208 aaPredicted RBP9.57□□□□□ -0.88
CTDNEP1-205ENST00000570828 LGALS7P47929 136 aa9.57□□□□□ -0.88
CTDNEP1-205ENST00000570828 FXYD3Q14802 87 aa9.57□□□□□ -0.88
CTDNEP1-205ENST00000570828 SRSF7Q16629 238 aaKnown RBP eCLIP9.57□□□□□ -0.88
CTDNEP1-205ENST00000570828 Q6ZS49 121 aa9.57□□□□□ -0.88
CTDNEP1-205ENST00000570828 TPRA1Q86W33 373 aa9.57□□□□□ -0.88
CTDNEP1-205ENST00000570828 DCUN1D4Q92564 292 aa9.57□□□□□ -0.88
CTDNEP1-205ENST00000570828 MS4A10Q96PG2 267 aa9.57□□□□□ -0.88
CTDNEP1-205ENST00000570828 DAPK2Q9UIK4 370 aa9.57□□□□□ -0.88
CTDNEP1-205ENST00000570828 SSR3Q9UNL2 185 aa9.57□□□□□ -0.88
CTDNEP1-205ENST00000570828 DNAH9Q9NYC9 4486 aa9.57□□□□□ -0.88
CTDNEP1-205ENST00000570828 IGHV4OR15-8A0A075B7B6 117 aa9.56□□□□□ -0.88
CTDNEP1-205ENST00000570828 A0A087WW49 117 aa9.56□□□□□ -0.88
CTDNEP1-205ENST00000570828 PRSS47A8MTI9 375 aa9.56□□□□□ -0.88
CTDNEP1-205ENST00000570828 SHOXO15266 292 aa9.56□□□□□ -0.88
CTDNEP1-205ENST00000570828 SAP30O75446 220 aa9.56□□□□□ -0.88
CTDNEP1-205ENST00000570828 IGHV3-11P01762 117 aa9.56□□□□□ -0.88
CTDNEP1-205ENST00000570828 TRGV3P03979 118 aa9.56□□□□□ -0.88
CTDNEP1-205ENST00000570828 RRASP10301 218 aa9.56□□□□□ -0.88
CTDNEP1-205ENST00000570828 SLURP1P55000 103 aa9.56□□□□□ -0.88
CTDNEP1-205ENST00000570828 ZNF773Q6PK81 442 aa9.56□□□□□ -0.88
CTDNEP1-205ENST00000570828 ZNF429Q86V71 674 aa9.56□□□□□ -0.88
CTDNEP1-205ENST00000570828 H1FOOQ8IZA3 346 aaPredicted RBP9.56□□□□□ -0.88
CTDNEP1-205ENST00000570828 POC5Q8NA72 575 aa9.56□□□□□ -0.88
CTDNEP1-205ENST00000570828 DLX4Q92988 240 aaPredicted RBP9.56□□□□□ -0.88
CTDNEP1-205ENST00000570828 C5orf30Q96GV9 206 aa9.56□□□□□ -0.88
CTDNEP1-205ENST00000570828 ADTRPQ96IZ2 230 aa9.56□□□□□ -0.88
CTDNEP1-205ENST00000570828 YTHDF1Q9BYJ9 559 aaKnown RBP9.56□□□□□ -0.88
CTDNEP1-205ENST00000570828 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.56□□□□□ -0.88
CTDNEP1-205ENST00000570828 ZNF355PQ9NSJ1 428 aa9.56□□□□□ -0.88
CTDNEP1-205ENST00000570828 RRP15Q9Y3B9 282 aaKnown RBP9.56□□□□□ -0.88
CTDNEP1-205ENST00000570828 TENM3Q9P273 2699 aa9.55□□□□□ -0.88
CTDNEP1-205ENST00000570828 IGKV1D-8A0A087WSZ0 117 aa9.55□□□□□ -0.88
CTDNEP1-205ENST00000570828 H3BUA1 57 aa9.55□□□□□ -0.88
CTDNEP1-205ENST00000570828 ARPC1BO15143 372 aaKnown RBP9.55□□□□□ -0.88
CTDNEP1-205ENST00000570828 IGLV2-23P01705 113 aa9.55□□□□□ -0.88
CTDNEP1-205ENST00000570828 GNG2P59768 71 aa9.55□□□□□ -0.88
CTDNEP1-205ENST00000570828 PITPNAQ00169 270 aa9.55□□□□□ -0.88
CTDNEP1-205ENST00000570828 CDNFQ49AH0 187 aa9.55□□□□□ -0.88
CTDNEP1-205ENST00000570828 TMEM177Q53S58 311 aa9.55□□□□□ -0.88
CTDNEP1-205ENST00000570828 HACD4Q5VWC8 232 aa9.55□□□□□ -0.88
CTDNEP1-205ENST00000570828 SFXN4Q6P4A7 337 aa9.55□□□□□ -0.88
CTDNEP1-205ENST00000570828 BVESQ8NE79 360 aa9.55□□□□□ -0.88
CTDNEP1-205ENST00000570828 LGALS14Q8TCE9 139 aa9.55□□□□□ -0.88
CTDNEP1-205ENST00000570828 ST6GALNAC5Q9BVH7 336 aa9.55□□□□□ -0.88
CTDNEP1-205ENST00000570828 ELF5Q9UKW6 265 aaPredicted RBP9.55□□□□□ -0.88
CTDNEP1-205ENST00000570828 LSM4Q9Y4Z0 139 aaKnown RBP9.55□□□□□ -0.88
CTDNEP1-205ENST00000570828 C13orf42A0A1B0GVH6 325 aa9.54□□□□□ -0.88
CTDNEP1-205ENST00000570828 TMEM235A6NFC5 223 aa9.54□□□□□ -0.88
CTDNEP1-205ENST00000570828 CRYZL1O95825 349 aa9.54□□□□□ -0.88
CTDNEP1-205ENST00000570828 HSPB1P04792 205 aaKnown RBP9.54□□□□□ -0.88
CTDNEP1-205ENST00000570828 CTXN2P0C2S0 81 aa9.54□□□□□ -0.88
CTDNEP1-205ENST00000570828 DUTP33316 252 aaKnown RBP9.54□□□□□ -0.88
CTDNEP1-205ENST00000570828 PJVKQ0ZLH3 352 aa9.54□□□□□ -0.88
CTDNEP1-205ENST00000570828 VMA21Q3ZAQ7 101 aa9.54□□□□□ -0.88
CTDNEP1-205ENST00000570828 OR5T1Q8NG75 326 aa9.54□□□□□ -0.88
CTDNEP1-205ENST00000570828 NUDCD2Q8WVJ2 157 aa9.54□□□□□ -0.88
CTDNEP1-205ENST00000570828 TMEM68Q96MH6 324 aa9.54□□□□□ -0.88
CTDNEP1-205ENST00000570828 OR51E2Q9H255 320 aa9.54□□□□□ -0.88
CTDNEP1-205ENST00000570828 DCSTAMPQ9H295 470 aa9.54□□□□□ -0.88
CTDNEP1-205ENST00000570828 A0A0G2JLM5 398 aa9.53□□□□□ -0.88
CTDNEP1-205ENST00000570828 LOC100506127A0A0U1RQW1 187 aa9.53□□□□□ -0.88
CTDNEP1-205ENST00000570828 J3QRK9 145 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms