RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 ANAPC10Q9UM13 185 aa2.79□□□□□ -1.96
UBR1-211ENST00000569971 BOKQ9UMX3 212 aaPredicted RBP2.79□□□□□ -1.96
UBR1-211ENST00000569971 C14orf166Q9Y224 244 aaKnown RBP2.79□□□□□ -1.96
UBR1-211ENST00000569971 RHBDD3Q9Y3P4 386 aa2.79□□□□□ -1.96
UBR1-211ENST00000569971 FLVCR1Q9Y5Y0 555 aa2.79□□□□□ -1.96
UBR1-211ENST00000569971 V9GYS6 101 aa2.79□□□□□ -1.96
UBR1-211ENST00000569971 HEATR5AQ86XA9 2040 aa2.79□□□□□ -1.96
UBR1-211ENST00000569971 LAMA2P24043 3122 aaKnown RBP2.78□□□□□ -1.96
UBR1-211ENST00000569971 EML5Q05BV3 1969 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 TNRC6BQ9UPQ9 1833 aaKnown RBP2.78□□□□□ -1.96
UBR1-211ENST00000569971 TRAV14DV4A0A0A6YYC5 116 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 IGHV3-15A0A0B4J1V0 119 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 IGKV3D-20A0A0C4DH25 116 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 A0A0J9YW62 118 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 OR6C6A6NF89 314 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 OR2AT4A6NND4 320 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 CEACAM18A8MTB9 384 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 EEF1E1-BLOC1S5C9J1V9 151 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 MFNGO00587 321 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 ABCD4O14678 606 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 TNFSF11O14788 317 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 SOCS1O15524 211 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 XRCC2O43543 280 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 TRAPPC6AO75865 159 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 FARS2O95363 451 aaKnown RBP2.78□□□□□ -1.96
UBR1-211ENST00000569971 SFT2D2O95562 160 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 IFNA21P01568 189 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 IGLV3-1P01715 115 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 GAPDHP04406 335 aaKnown RBP2.78□□□□□ -1.96
UBR1-211ENST00000569971 SERPINA5P05154 406 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 NMBP08949 121 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 LIPCP11150 499 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 CCL4P13236 92 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 TDGF1P13385 188 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 TCN2P20062 427 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 COX5AP20674 150 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 CNR1P21554 472 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 ZP3P21754 424 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 GATA2P23769 480 aaPredicted RBP2.78□□□□□ -1.96
UBR1-211ENST00000569971 GDF1P27539 372 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 PSMB6P28072 239 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 OTX1P32242 354 aaPredicted RBP2.78□□□□□ -1.96
UBR1-211ENST00000569971 RBMXP38159 391 aaKnown RBP2.78□□□□□ -1.96
UBR1-211ENST00000569971 KIR2DS2P43631 304 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 CYB561P49447 251 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 EIF5AP63241 154 aaKnown RBP2.78□□□□□ -1.96
UBR1-211ENST00000569971 SIGLEC14Q08ET2 396 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 RSU1Q15404 277 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 SURF2Q15527 256 aaPredicted RBP2.78□□□□□ -1.96
UBR1-211ENST00000569971 Q1RN00 199 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 MICBQ29980 383 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 HIGD2BQ4VC39 106 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 LY6G6FQ5SQ64 297 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 ZNF660Q6AZW8 331 aaPredicted RBP2.78□□□□□ -1.96
UBR1-211ENST00000569971 EIF5AL1Q6IS14 154 aaKnown RBP2.78□□□□□ -1.96
UBR1-211ENST00000569971 H3F3CQ6NXT2 135 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 ALKAL2Q6UX46 152 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 Q6ZSR3 168 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 SLC16A14Q7RTX9 510 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 HSD17B13Q7Z5P4 300 aaPredicted RBP2.78□□□□□ -1.96
UBR1-211ENST00000569971 TGIF2LXQ8IUE1 241 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 LRRC18Q8N456 261 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 TMEM104Q8NE00 496 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 PXT1Q8NFP0 134 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 OR2V1Q8NHB1 315 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 MARCH1Q8TCQ1 289 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 CASTOR1Q8WTX7 329 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 CT55Q8WUE5 264 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 PPP1R1CQ8WVI7 109 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 DCUN1D4Q92564 292 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 CPNE4Q96A23 557 aaPredicted RBP2.78□□□□□ -1.96
UBR1-211ENST00000569971 REEP6Q96HR9 211 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 VSIG2Q96IQ7 327 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 ARHGAP5-AS1Q96IT6 56 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 SEC22AQ96IW7 307 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 SPACA5Q96QH8 159 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 NICN1Q9BSH3 213 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 DDA1Q9BW61 102 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 ZNF471Q9BX82 626 aaPredicted RBP2.78□□□□□ -1.96
UBR1-211ENST00000569971 SRXN1Q9BYN0 137 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 NMES1Q9C002 83 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 CHST5Q9GZS9 411 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 DNTTIP1Q9H147 329 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 PPA2Q9H2U2 334 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 METTL8Q9H825 291 aaKnown RBP2.78□□□□□ -1.96
UBR1-211ENST00000569971 SH2D2AQ9NP31 389 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 TMEM38BQ9NVV0 291 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 PLEKHJ1Q9NW61 149 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 GLS2Q9UI32 602 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 ATPIF1Q9UII2 106 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 TNFSF18Q9UNG2 199 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 SLC7A11Q9UPY5 501 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 VSIG4Q9Y279 399 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 C5orf42Q9H799 3197 aa2.78□□□□□ -1.96
UBR1-211ENST00000569971 REV3LO60673 3130 aa2.77□□□□□ -1.97
UBR1-211ENST00000569971 GOLGA4Q13439 2230 aaKnown RBP2.77□□□□□ -1.97
UBR1-211ENST00000569971 MKI67P46013 3256 aaKnown RBP2.77□□□□□ -1.97
UBR1-211ENST00000569971 IGKV1-9A0A0C4DH69 117 aa2.77□□□□□ -1.97
UBR1-211ENST00000569971 C21orf140B9A014 251 aa2.77□□□□□ -1.97
UBR1-211ENST00000569971 TEX46H3BTG2 121 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms