RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 RHBDL2Q9NX52 303 aa10.65□□□□□ -0.7
GTF3C1-211ENST00000569653 RDH8Q9NYR8 311 aa10.65□□□□□ -0.7
GTF3C1-211ENST00000569653 ZMAT5Q9UDW3 170 aaKnown RBP10.65□□□□□ -0.7
GTF3C1-211ENST00000569653 CSMD3Q7Z407 3707 aa10.65□□□□□ -0.7
GTF3C1-211ENST00000569653 STARD9Q9P2P6 4700 aa10.65□□□□□ -0.71
GTF3C1-211ENST00000569653 IGKV1D-8A0A087WSZ0 117 aa10.64□□□□□ -0.71
GTF3C1-211ENST00000569653 LINC01619G3V211 115 aa10.64□□□□□ -0.71
GTF3C1-211ENST00000569653 SLC25A17O43808 307 aa10.64□□□□□ -0.71
GTF3C1-211ENST00000569653 RBMXL2O75526 392 aaKnown RBP10.64□□□□□ -0.71
GTF3C1-211ENST00000569653 RBBP9O75884 186 aa10.64□□□□□ -0.71
GTF3C1-211ENST00000569653 LY86O95711 162 aa10.64□□□□□ -0.71
GTF3C1-211ENST00000569653 CRYGBP07316 175 aa10.64□□□□□ -0.71
GTF3C1-211ENST00000569653 DTYMKP23919 212 aa10.64□□□□□ -0.71
GTF3C1-211ENST00000569653 MC5RP33032 325 aa10.64□□□□□ -0.71
GTF3C1-211ENST00000569653 PITPNAQ00169 270 aa10.64□□□□□ -0.71
GTF3C1-211ENST00000569653 PLGLAQ15195 96 aa10.64□□□□□ -0.71
GTF3C1-211ENST00000569653 SRSF7Q16629 238 aaKnown RBP eCLIP10.64□□□□□ -0.71
GTF3C1-211ENST00000569653 CDNFQ49AH0 187 aa10.64□□□□□ -0.71
GTF3C1-211ENST00000569653 ACTBL2Q562R1 376 aa10.64□□□□□ -0.71
GTF3C1-211ENST00000569653 ACSM6Q6P461 480 aa10.64□□□□□ -0.71
GTF3C1-211ENST00000569653 ZNF562Q6V9R5 426 aa10.64□□□□□ -0.71
GTF3C1-211ENST00000569653 GPR141Q7Z602 305 aa10.64□□□□□ -0.71
GTF3C1-211ENST00000569653 SBSPONQ8IVN8 264 aa10.64□□□□□ -0.71
GTF3C1-211ENST00000569653 ABHD5Q8WTS1 349 aa10.64□□□□□ -0.71
GTF3C1-211ENST00000569653 RHOVQ96L33 236 aa10.64□□□□□ -0.71
GTF3C1-211ENST00000569653 CABLES2Q9BTV7 478 aa10.64□□□□□ -0.71
GTF3C1-211ENST00000569653 A0A0A6YYH2 397 aa10.63□□□□□ -0.71
GTF3C1-211ENST00000569653 A6NJ64 397 aa10.63□□□□□ -0.71
GTF3C1-211ENST00000569653 M0R1X1 148 aa10.63□□□□□ -0.71
GTF3C1-211ENST00000569653 BET1O15155 118 aa10.63□□□□□ -0.71
GTF3C1-211ENST00000569653 SAP30O75446 220 aa10.63□□□□□ -0.71
GTF3C1-211ENST00000569653 GSTT2P0CG29 244 aa10.63□□□□□ -0.71
GTF3C1-211ENST00000569653 GSTT2BP0CG30 244 aa10.63□□□□□ -0.71
GTF3C1-211ENST00000569653 RPL5P46777 297 aaKnown RBP10.63□□□□□ -0.71
GTF3C1-211ENST00000569653 INSL3P51460 131 aa10.63□□□□□ -0.71
GTF3C1-211ENST00000569653 GNG2P59768 71 aa10.63□□□□□ -0.71
GTF3C1-211ENST00000569653 AKIRIN2Q53H80 203 aa10.63□□□□□ -0.71
GTF3C1-211ENST00000569653 HACD4Q5VWC8 232 aa10.63□□□□□ -0.71
GTF3C1-211ENST00000569653 Q6ZS49 121 aa10.63□□□□□ -0.71
GTF3C1-211ENST00000569653 OVCH2Q7RTZ1 564 aa10.63□□□□□ -0.71
GTF3C1-211ENST00000569653 ZNF429Q86V71 674 aa10.63□□□□□ -0.71
GTF3C1-211ENST00000569653 TCTEX1D1Q8N7M0 179 aa10.63□□□□□ -0.71
GTF3C1-211ENST00000569653 OR10J5Q8NHC4 309 aa10.63□□□□□ -0.71
GTF3C1-211ENST00000569653 GRPEL2Q8TAA5 225 aa10.63□□□□□ -0.71
GTF3C1-211ENST00000569653 RNF5Q99942 180 aa10.63□□□□□ -0.71
GTF3C1-211ENST00000569653 ZNF230Q9UIE0 474 aaPredicted RBP10.63□□□□□ -0.71
GTF3C1-211ENST00000569653 ZNF221Q9UK13 617 aa10.63□□□□□ -0.71
GTF3C1-211ENST00000569653 ADAM30Q9UKF2 790 aa10.63□□□□□ -0.71
GTF3C1-211ENST00000569653 ELF5Q9UKW6 265 aaPredicted RBP10.63□□□□□ -0.71
GTF3C1-211ENST00000569653 TMEM235A6NFC5 223 aa10.62□□□□□ -0.71
GTF3C1-211ENST00000569653 SRRM4A7MD48 611 aaKnown RBP10.62□□□□□ -0.71
GTF3C1-211ENST00000569653 SPDEFO95238 335 aa10.62□□□□□ -0.71
GTF3C1-211ENST00000569653 TPPP2P59282 170 aa10.62□□□□□ -0.71
GTF3C1-211ENST00000569653 PDPNQ86YL7 162 aa10.62□□□□□ -0.71
GTF3C1-211ENST00000569653 OR5H6Q8NGV6 325 aa10.62□□□□□ -0.71
GTF3C1-211ENST00000569653 SLC25A38Q96DW6 304 aa10.62□□□□□ -0.71
GTF3C1-211ENST00000569653 GINS4Q9BRT9 223 aa10.62□□□□□ -0.71
GTF3C1-211ENST00000569653 DCSTAMPQ9H295 470 aa10.62□□□□□ -0.71
GTF3C1-211ENST00000569653 SDHAF2Q9NX18 166 aa10.62□□□□□ -0.71
GTF3C1-211ENST00000569653 SPATA2Q9UM82 520 aa10.62□□□□□ -0.71
GTF3C1-211ENST00000569653 SMAD5-AS1Q9Y6J3 95 aa10.62□□□□□ -0.71
GTF3C1-211ENST00000569653 TRBV6-7A0A0A0MS04 114 aa10.61□□□□□ -0.71
GTF3C1-211ENST00000569653 TRGV3P03979 118 aa10.61□□□□□ -0.71
GTF3C1-211ENST00000569653 HSPB1P04792 205 aaKnown RBP10.61□□□□□ -0.71
GTF3C1-211ENST00000569653 OR8U9P0C7N5 309 aa10.61□□□□□ -0.71
GTF3C1-211ENST00000569653 FRMD6-AS1P0C7T7 363 aa10.61□□□□□ -0.71
GTF3C1-211ENST00000569653 GP9P14770 177 aa10.61□□□□□ -0.71
GTF3C1-211ENST00000569653 RPS16P62249 146 aaKnown RBP10.61□□□□□ -0.71
GTF3C1-211ENST00000569653 FXYD3Q14802 87 aa10.61□□□□□ -0.71
GTF3C1-211ENST00000569653 CLVS1Q8IUQ0 354 aaPredicted RBP10.61□□□□□ -0.71
GTF3C1-211ENST00000569653 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.61□□□□□ -0.71
GTF3C1-211ENST00000569653 OR5T1Q8NG75 326 aa10.61□□□□□ -0.71
GTF3C1-211ENST00000569653 NUDCD2Q8WVJ2 157 aa10.61□□□□□ -0.71
GTF3C1-211ENST00000569653 SLC25A46Q96AG3 418 aa10.61□□□□□ -0.71
GTF3C1-211ENST00000569653 TSNAXQ99598 290 aaKnown RBP10.61□□□□□ -0.71
GTF3C1-211ENST00000569653 OR2D2Q9H210 308 aa10.61□□□□□ -0.71
GTF3C1-211ENST00000569653 DIABLOQ9NR28 239 aa10.61□□□□□ -0.71
GTF3C1-211ENST00000569653 SLC35D1Q9NTN3 355 aa10.61□□□□□ -0.71
GTF3C1-211ENST00000569653 TRBV12-3P01733 135 aa10.6□□□□□ -0.71
GTF3C1-211ENST00000569653 SPCS2Q15005 226 aa10.6□□□□□ -0.71
GTF3C1-211ENST00000569653 UBE2NLQ5JXB2 153 aa10.6□□□□□ -0.71
GTF3C1-211ENST00000569653 PYHIN1Q6K0P9 492 aa10.6□□□□□ -0.71
GTF3C1-211ENST00000569653 IL34Q6ZMJ4 242 aa10.6□□□□□ -0.71
GTF3C1-211ENST00000569653 Q8N1Y9 231 aa10.6□□□□□ -0.71
GTF3C1-211ENST00000569653 POC5Q8NA72 575 aa10.6□□□□□ -0.71
GTF3C1-211ENST00000569653 DDB2Q92466 427 aa10.6□□□□□ -0.71
GTF3C1-211ENST00000569653 LYSTQ99698 3801 aa10.6□□□□□ -0.71
GTF3C1-211ENST00000569653 CEPT1Q9Y6K0 416 aa10.6□□□□□ -0.71
GTF3C1-211ENST00000569653 TRAV18A0A075B6X5 111 aa10.59□□□□□ -0.71
GTF3C1-211ENST00000569653 LINC00473A8K010 186 aa10.59□□□□□ -0.71
GTF3C1-211ENST00000569653 APOA2P02652 100 aa10.59□□□□□ -0.71
GTF3C1-211ENST00000569653 CTXN2P0C2S0 81 aa10.59□□□□□ -0.71
GTF3C1-211ENST00000569653 APELAP0DMC3 54 aa10.59□□□□□ -0.71
GTF3C1-211ENST00000569653 TMEM267Q0VDI3 215 aaPredicted RBP10.59□□□□□ -0.71
GTF3C1-211ENST00000569653 BVESQ8NE79 360 aa10.59□□□□□ -0.71
GTF3C1-211ENST00000569653 FLYWCH2Q96CP2 140 aaKnown RBP10.59□□□□□ -0.71
GTF3C1-211ENST00000569653 KCTD12Q96CX2 325 aaKnown RBP10.59□□□□□ -0.71
GTF3C1-211ENST00000569653 HARBI1Q96MB7 349 aa10.59□□□□□ -0.71
GTF3C1-211ENST00000569653 RCHY1Q96PM5 261 aa10.59□□□□□ -0.71
GTF3C1-211ENST00000569653 ST6GALNAC5Q9BVH7 336 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms